RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 CHD2O14647 1828 aaKnown RBP21.45■■□□□ 1.03
CTDSP1-210ENST00000491064 SLC52A1Q9NWF4 448 aa21.45■■□□□ 1.02
CTDSP1-210ENST00000491064 SLAIN2Q9P270 581 aa21.45■■□□□ 1.02
CTDSP1-210ENST00000491064 CHIC2Q9UKJ5 165 aa21.45■■□□□ 1.02
CTDSP1-210ENST00000491064 MYO5BQ9ULV0 1848 aa21.44■■□□□ 1.02
CTDSP1-210ENST00000491064 JCADQ9P266 1359 aa21.44■■□□□ 1.02
CTDSP1-210ENST00000491064 BCANQ96GW7 911 aa21.43■■□□□ 1.02
CTDSP1-210ENST00000491064 ZFYVE9O95405 1425 aa21.43■■□□□ 1.02
CTDSP1-210ENST00000491064 COL16A1Q07092 1604 aaPredicted RBP21.41■■□□□ 1.02
CTDSP1-210ENST00000491064 PLEKHG1Q9ULL1 1385 aa21.41■■□□□ 1.02
CTDSP1-210ENST00000491064 RPRD2Q5VT52 1461 aaKnown RBP21.39■■□□□ 1.02
CTDSP1-210ENST00000491064 GCC2Q8IWJ2 1684 aa21.39■■□□□ 1.01
CTDSP1-210ENST00000491064 ADGRL2O95490 1459 aa21.39■■□□□ 1.01
CTDSP1-210ENST00000491064 RIMS2Q9UQ26 1411 aa21.37■■□□□ 1.01
CTDSP1-210ENST00000491064 TMEM131LA2VDJ0 1609 aa21.37■■□□□ 1.01
CTDSP1-210ENST00000491064 APLP2Q06481 763 aa21.36■■□□□ 1.01
CTDSP1-210ENST00000491064 LRP6O75581 1613 aa21.36■■□□□ 1.01
CTDSP1-210ENST00000491064 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
CTDSP1-210ENST00000491064 PPP1R15AO75807 674 aaPredicted RBP21.34■■□□□ 1.01
CTDSP1-210ENST00000491064 HDGFP51858 240 aaKnown RBP21.33■■□□□ 1.01
CTDSP1-210ENST00000491064 TBX22Q9Y458 520 aa21.33■■□□□ 1.01
CTDSP1-210ENST00000491064 SPATA31A6Q5VVP1 1343 aa21.32■■□□□ 1
CTDSP1-210ENST00000491064 ANKRD50Q9ULJ7 1429 aa21.32■■□□□ 1
CTDSP1-210ENST00000491064 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.32■■□□□ 1
CTDSP1-210ENST00000491064 AHDC1Q5TGY3 1603 aaPredicted RBP21.31■■□□□ 1
CTDSP1-210ENST00000491064 SHPRHQ149N8 1683 aa21.31■■□□□ 1
CTDSP1-210ENST00000491064 ADAMTS13Q76LX8 1427 aa21.29■■□□□ 1
CTDSP1-210ENST00000491064 DIP2AQ14689 1571 aa21.28■■□□□ 1
CTDSP1-210ENST00000491064 MEX3CQ5U5Q3 659 aaKnown RBP21.28■■□□□ 1
CTDSP1-210ENST00000491064 ZNF772Q68DY9 489 aaPredicted RBP21.28■■□□□ 1
CTDSP1-210ENST00000491064 C14orf37Q86TY3 774 aa21.28■■□□□ 1
CTDSP1-210ENST00000491064 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.28■■□□□ 1
CTDSP1-210ENST00000491064 CADPS2Q86UW7 1296 aa21.27■■□□□ 1
CTDSP1-210ENST00000491064 UPF1Q92900 1129 aaKnown RBP eCLIP21.27■■□□□ 14e-7■■■□□ 16.6
CTDSP1-210ENST00000491064 C19orf44Q9H6X5 657 aa21.26■□□□□ 0.99
CTDSP1-210ENST00000491064 PIK3R4Q99570 1358 aa21.25■□□□□ 0.99
CTDSP1-210ENST00000491064 UNC13BO14795 1591 aa21.25■□□□□ 0.99
CTDSP1-210ENST00000491064 E9PCH4 1651 aa21.24■□□□□ 0.99
CTDSP1-210ENST00000491064 CHGAP10645 457 aaKnown RBP21.24■□□□□ 0.99
CTDSP1-210ENST00000491064 ATF3P18847 181 aa21.24■□□□□ 0.99
CTDSP1-210ENST00000491064 NUTM2DQ5VT03 806 aaPredicted RBP21.24■□□□□ 0.99
CTDSP1-210ENST00000491064 TRIM52Q96A61 297 aa21.24■□□□□ 0.99
CTDSP1-210ENST00000491064 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
CTDSP1-210ENST00000491064 TRPM2O94759 1503 aa21.21■□□□□ 0.99
CTDSP1-210ENST00000491064 BRINP3Q76B58 766 aa21.2■□□□□ 0.98
CTDSP1-210ENST00000491064 PTPRUQ92729 1446 aa21.2■□□□□ 0.98
CTDSP1-210ENST00000491064 RXRBP28702 533 aa21.18■□□□□ 0.98
CTDSP1-210ENST00000491064 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
CTDSP1-210ENST00000491064 IQGAP3Q86VI3 1631 aa21.18■□□□□ 0.98
CTDSP1-210ENST00000491064 DCCP43146 1447 aa21.17■□□□□ 0.98
CTDSP1-210ENST00000491064 CDK12Q9NYV4 1490 aaPredicted RBP21.17■□□□□ 0.98
CTDSP1-210ENST00000491064 XRN1Q8IZH2 1706 aaKnown RBP21.15■□□□□ 0.98
CTDSP1-210ENST00000491064 ASXL1Q8IXJ9 1541 aa21.15■□□□□ 0.98
CTDSP1-210ENST00000491064 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-210ENST00000491064 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-210ENST00000491064 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
CTDSP1-210ENST00000491064 NRXN3Q9Y4C0 1643 aa21.15■□□□□ 0.98
CTDSP1-210ENST00000491064 NHSL1Q5SYE7 1610 aa21.14■□□□□ 0.97
CTDSP1-210ENST00000491064 SETD5Q9C0A6 1442 aa21.13■□□□□ 0.97
CTDSP1-210ENST00000491064 AFF2P51816 1311 aa21.12■□□□□ 0.97
CTDSP1-210ENST00000491064 MST1RQ04912 1400 aa21.12■□□□□ 0.97
CTDSP1-210ENST00000491064 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
CTDSP1-210ENST00000491064 ROCK1Q13464 1354 aa21.1■□□□□ 0.97
CTDSP1-210ENST00000491064 NUP155O75694 1391 aa21.08■□□□□ 0.96
CTDSP1-210ENST00000491064 LRRC59Q96AG4 307 aaKnown RBP21.07■□□□□ 0.96
CTDSP1-210ENST00000491064 SRCAPQ6ZRS2 3230 aa21.06■□□□□ 0.96
CTDSP1-210ENST00000491064 RGS12O14924 1447 aa21.06■□□□□ 0.96
CTDSP1-210ENST00000491064 PNPLA6Q8IY17 1366 aa21.05■□□□□ 0.96
CTDSP1-210ENST00000491064 SPHKAPQ2M3C7 1700 aa21.04■□□□□ 0.96
CTDSP1-210ENST00000491064 C8orf37Q96NL8 207 aa21.04■□□□□ 0.96
CTDSP1-210ENST00000491064 METP08581 1390 aa21.04■□□□□ 0.96
CTDSP1-210ENST00000491064 ADGRL3Q9HAR2 1447 aa21.04■□□□□ 0.96
CTDSP1-210ENST00000491064 RBM6P78332 1123 aaKnown RBP21.03■□□□□ 0.96
CTDSP1-210ENST00000491064 DDX17Q92841 729 aaKnown RBP21.03■□□□□ 0.96
CTDSP1-210ENST00000491064 QTRT2Q9H974 415 aaKnown RBP21.03■□□□□ 0.96
CTDSP1-210ENST00000491064 NALCNQ8IZF0 1738 aa21.03■□□□□ 0.96
CTDSP1-210ENST00000491064 ZNF326Q5BKZ1 582 aaKnown RBP20.99■□□□□ 0.95
CTDSP1-210ENST00000491064 LAMC1P11047 1609 aa20.97■□□□□ 0.95
CTDSP1-210ENST00000491064 NEXMIFQ5QGS0 1516 aa20.97■□□□□ 0.95
CTDSP1-210ENST00000491064 C1orf167Q5SNV9 1468 aa20.95■□□□□ 0.94
CTDSP1-210ENST00000491064 CLTCL1P53675 1640 aa20.95■□□□□ 0.94
CTDSP1-210ENST00000491064 ADAMTS2O95450 1211 aa20.94■□□□□ 0.94
CTDSP1-210ENST00000491064 NGLY1Q96IV0 654 aa20.94■□□□□ 0.94
CTDSP1-210ENST00000491064 ITGAEP38570 1179 aa20.92■□□□□ 0.94
CTDSP1-210ENST00000491064 SOS2Q07890 1332 aaPredicted RBP20.91■□□□□ 0.94
CTDSP1-210ENST00000491064 PTCH1Q13635 1447 aa20.91■□□□□ 0.94
CTDSP1-210ENST00000491064 ATAD2Q6PL18 1390 aa20.91■□□□□ 0.94
CTDSP1-210ENST00000491064 KIF1BO60333 1816 aa20.9■□□□□ 0.94
CTDSP1-210ENST00000491064 EP400Q96L91 3159 aa20.9■□□□□ 0.94
CTDSP1-210ENST00000491064 USP21Q9UK80 565 aa20.89■□□□□ 0.93
CTDSP1-210ENST00000491064 ORAI2Q96SN7 254 aa20.88■□□□□ 0.93
CTDSP1-210ENST00000491064 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
CTDSP1-210ENST00000491064 TRPC5Q9UL62 973 aaPredicted RBP20.87■□□□□ 0.93
CTDSP1-210ENST00000491064 COL22A1Q8NFW1 1626 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-210ENST00000491064 FNBP4Q8N3X1 1017 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-210ENST00000491064 ATRNO75882 1429 aa20.85■□□□□ 0.93
CTDSP1-210ENST00000491064 PRAG1Q86YV5 1406 aa20.85■□□□□ 0.93
CTDSP1-210ENST00000491064 MYOM2P54296 1465 aa20.81■□□□□ 0.92
CTDSP1-210ENST00000491064 HFM1A2PYH4 1435 aa20.8■□□□□ 0.92
CTDSP1-210ENST00000491064 VGFO15240 615 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms