RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.98■□□□□ 0.63
SNX12-205ENST00000490561 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
SNX12-205ENST00000490561 ZFYVE9O95405 1425 aa18.97■□□□□ 0.63
SNX12-205ENST00000490561 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
SNX12-205ENST00000490561 NEXMIFQ5QGS0 1516 aa18.96■□□□□ 0.63
SNX12-205ENST00000490561 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
SNX12-205ENST00000490561 IFT172Q9UG01 1749 aa18.96■□□□□ 0.63
SNX12-205ENST00000490561 RIMS2Q9UQ26 1411 aa18.95■□□□□ 0.62
SNX12-205ENST00000490561 PPLO60437 1756 aa18.95■□□□□ 0.62
SNX12-205ENST00000490561 SLIT1O75093 1534 aa18.95■□□□□ 0.62
SNX12-205ENST00000490561 MYO5BQ9ULV0 1848 aa18.94■□□□□ 0.62
SNX12-205ENST00000490561 ARHGAP23Q9P227 1491 aa18.94■□□□□ 0.62
SNX12-205ENST00000490561 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
SNX12-205ENST00000490561 NRXN1Q9ULB1 1477 aa18.92■□□□□ 0.62
SNX12-205ENST00000490561 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
SNX12-205ENST00000490561 EID1Q9Y6B2 187 aa18.92■□□□□ 0.62
SNX12-205ENST00000490561 PIK3C2GO75747 1445 aa18.87■□□□□ 0.61
SNX12-205ENST00000490561 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
SNX12-205ENST00000490561 SCAF11Q99590 1463 aaKnown RBP18.86■□□□□ 0.61
SNX12-205ENST00000490561 ADGRF5Q8IZF2 1346 aa18.86■□□□□ 0.61
SNX12-205ENST00000490561 TXNDC2Q86VQ3 553 aa18.86■□□□□ 0.61
SNX12-205ENST00000490561 ANKLE2Q86XL3 938 aa18.86■□□□□ 0.61
SNX12-205ENST00000490561 KIAA1210Q9ULL0 1709 aa18.86■□□□□ 0.61
SNX12-205ENST00000490561 PLEKHG1Q9ULL1 1385 aa18.85■□□□□ 0.61
SNX12-205ENST00000490561 LAMC1P11047 1609 aa18.85■□□□□ 0.61
SNX12-205ENST00000490561 NBPF8Q3BBV2 869 aa18.84■□□□□ 0.61
SNX12-205ENST00000490561 LMTK3Q96Q04 1460 aa18.84■□□□□ 0.61
SNX12-205ENST00000490561 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
SNX12-205ENST00000490561 TRPM1Q7Z4N2 1603 aa18.82■□□□□ 0.6
SNX12-205ENST00000490561 LTKP29376 864 aa18.81■□□□□ 0.6
SNX12-205ENST00000490561 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
SNX12-205ENST00000490561 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
SNX12-205ENST00000490561 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
SNX12-205ENST00000490561 GPRASP1Q5JY77 1395 aa18.8■□□□□ 0.6
SNX12-205ENST00000490561 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
SNX12-205ENST00000490561 MED14O60244 1454 aa18.78■□□□□ 0.6
SNX12-205ENST00000490561 POLR1AO95602 1720 aaPredicted RBP18.78■□□□□ 0.6
SNX12-205ENST00000490561 BCANQ96GW7 911 aa18.77■□□□□ 0.6
SNX12-205ENST00000490561 ALKQ9UM73 1620 aa18.77■□□□□ 0.6
SNX12-205ENST00000490561 CFAP70Q5T0N1 1121 aa18.76■□□□□ 0.59
SNX12-205ENST00000490561 NPHP4O75161 1426 aaPredicted RBP18.75■□□□□ 0.59
SNX12-205ENST00000490561 NRXN3Q9Y4C0 1643 aa18.75■□□□□ 0.59
SNX12-205ENST00000490561 CARD11Q9BXL7 1154 aa18.75■□□□□ 0.59
SNX12-205ENST00000490561 IQGAP1P46940 1657 aa18.74■□□□□ 0.59
SNX12-205ENST00000490561 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
SNX12-205ENST00000490561 ADAMTS13Q76LX8 1427 aa18.73■□□□□ 0.59
SNX12-205ENST00000490561 HSPA2P54652 639 aa18.72■□□□□ 0.59
SNX12-205ENST00000490561 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
SNX12-205ENST00000490561 NCKAP5LQ9HCH0 1330 aa18.72■□□□□ 0.59
SNX12-205ENST00000490561 PIK3R4Q99570 1358 aa18.71■□□□□ 0.59
SNX12-205ENST00000490561 NBPF1Q3BBV0 1214 aa18.71■□□□□ 0.59
SNX12-205ENST00000490561 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
SNX12-205ENST00000490561 EIF3AQ14152 1382 aaKnown RBP18.7■□□□□ 0.58
SNX12-205ENST00000490561 EIF4G2P78344 907 aaKnown RBP eCLIP18.69■□□□□ 0.58
SNX12-205ENST00000490561 ASXL1Q8IXJ9 1541 aa18.68■□□□□ 0.58
SNX12-205ENST00000490561 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
SNX12-205ENST00000490561 USP47Q96K76 1375 aa18.68■□□□□ 0.58
SNX12-205ENST00000490561 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
SNX12-205ENST00000490561 DMRT2Q9Y5R5 561 aa18.67■□□□□ 0.58
SNX12-205ENST00000490561 SLC26A8Q96RN1 970 aa18.66■□□□□ 0.58
SNX12-205ENST00000490561 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
SNX12-205ENST00000490561 METP08581 1390 aa18.65■□□□□ 0.58
SNX12-205ENST00000490561 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
SNX12-205ENST00000490561 DLC1Q96QB1 1528 aa18.64■□□□□ 0.58
SNX12-205ENST00000490561 SLC24A1O60721 1099 aa18.64■□□□□ 0.57
SNX12-205ENST00000490561 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
SNX12-205ENST00000490561 TECPR2O15040 1411 aa18.64■□□□□ 0.57
SNX12-205ENST00000490561 STRCQ7RTU9 1775 aa18.63■□□□□ 0.57
SNX12-205ENST00000490561 SIRT1Q96EB6 747 aa18.63■□□□□ 0.57
SNX12-205ENST00000490561 KNDC1Q76NI1 1749 aa18.63■□□□□ 0.57
SNX12-205ENST00000490561 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
SNX12-205ENST00000490561 CPS1P31327 1500 aa18.6■□□□□ 0.57
SNX12-205ENST00000490561 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
SNX12-205ENST00000490561 TRAK1Q9UPV9 953 aa18.6■□□□□ 0.57
SNX12-205ENST00000490561 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
SNX12-205ENST00000490561 STK26Q9P289 416 aa18.59■□□□□ 0.57
SNX12-205ENST00000490561 CENPJQ9HC77 1338 aaPredicted RBP18.58■□□□□ 0.57
SNX12-205ENST00000490561 AMOTL2Q9Y2J4 779 aa18.58■□□□□ 0.56
SNX12-205ENST00000490561 NWD1Q149M9 1564 aa18.58■□□□□ 0.56
SNX12-205ENST00000490561 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
SNX12-205ENST00000490561 XRN1Q8IZH2 1706 aaKnown RBP18.57■□□□□ 0.56
SNX12-205ENST00000490561 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
SNX12-205ENST00000490561 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
SNX12-205ENST00000490561 KCNA6P17658 529 aa18.57■□□□□ 0.56
SNX12-205ENST00000490561 CHD2O14647 1828 aaKnown RBP18.56■□□□□ 0.56
SNX12-205ENST00000490561 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
SNX12-205ENST00000490561 POGKQ9P215 609 aa18.56■□□□□ 0.56
SNX12-205ENST00000490561 NKTRP30414 1462 aaKnown RBP18.55■□□□□ 0.56
SNX12-205ENST00000490561 ZNF316A6NFI3 1004 aaPredicted RBP18.53■□□□□ 0.56
SNX12-205ENST00000490561 PRAM1Q96QH2 718 aa18.53■□□□□ 0.56
SNX12-205ENST00000490561 ROBO2Q9HCK4 1378 aa18.52■□□□□ 0.55
SNX12-205ENST00000490561 QRICH2Q9H0J4 1663 aa18.5■□□□□ 0.55
SNX12-205ENST00000490561 TMF1P82094 1093 aa18.5■□□□□ 0.55
SNX12-205ENST00000490561 CDCA8Q53HL2 280 aa18.5■□□□□ 0.55
SNX12-205ENST00000490561 TESK2Q96S53 571 aa18.5■□□□□ 0.55
SNX12-205ENST00000490561 NCOA3Q9Y6Q9 1424 aa18.48■□□□□ 0.55
SNX12-205ENST00000490561 EVC2Q86UK5 1308 aa18.47■□□□□ 0.55
SNX12-205ENST00000490561 PLEKHH1Q9ULM0 1364 aa18.46■□□□□ 0.55
SNX12-205ENST00000490561 WAPLQ7Z5K2 1190 aa18.46■□□□□ 0.55
SNX12-205ENST00000490561 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms