RNA–Protein interactions for RNA: ENST00000490471.1

CDCP1-203, Transcript of CUB domain containing protein 1, humanhuman

TSL 4

Gene CDCP1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-203ENST00000490471 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
CDCP1-203ENST00000490471 NOS1P29475 1434 aa17.24■□□□□ 0.35
CDCP1-203ENST00000490471 CACNB1Q02641 598 aaPredicted RBP17.24■□□□□ 0.35
CDCP1-203ENST00000490471 HSPA1LP34931 641 aa17.22■□□□□ 0.35
CDCP1-203ENST00000490471 ITGAEP38570 1179 aa17.22■□□□□ 0.35
CDCP1-203ENST00000490471 TET3O43151 1660 aa17.22■□□□□ 0.35
CDCP1-203ENST00000490471 LRRC7Q96NW7 1537 aa17.21■□□□□ 0.35
CDCP1-203ENST00000490471 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
CDCP1-203ENST00000490471 KCNA6P17658 529 aa17.21■□□□□ 0.35
CDCP1-203ENST00000490471 GCC2Q8IWJ2 1684 aa17.2■□□□□ 0.34
CDCP1-203ENST00000490471 ADGRB3O60242 1522 aa17.2■□□□□ 0.34
CDCP1-203ENST00000490471 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
CDCP1-203ENST00000490471 SOCS7O14512 581 aa17.18■□□□□ 0.34
CDCP1-203ENST00000490471 NUP155O75694 1391 aa17.17■□□□□ 0.34
CDCP1-203ENST00000490471 UNC13BO14795 1591 aa17.17■□□□□ 0.34
CDCP1-203ENST00000490471 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
CDCP1-203ENST00000490471 STRCP1A6NGW2 1772 aa17.14■□□□□ 0.33
CDCP1-203ENST00000490471 PLEKHG1Q9ULL1 1385 aa17.14■□□□□ 0.33
CDCP1-203ENST00000490471 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
CDCP1-203ENST00000490471 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
CDCP1-203ENST00000490471 IQGAP3Q86VI3 1631 aa17.12■□□□□ 0.33
CDCP1-203ENST00000490471 ILDR2Q71H61 639 aa17.12■□□□□ 0.33
CDCP1-203ENST00000490471 MSH6P52701 1360 aa17.12■□□□□ 0.33
CDCP1-203ENST00000490471 PPARGC1BQ86YN6 1023 aaKnown RBP17.11■□□□□ 0.33
CDCP1-203ENST00000490471 TMEM94Q12767 1356 aa17.11■□□□□ 0.33
CDCP1-203ENST00000490471 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
CDCP1-203ENST00000490471 C14orf37Q86TY3 774 aa17.09■□□□□ 0.33
CDCP1-203ENST00000490471 E9PCH4 1651 aa17.08■□□□□ 0.32
CDCP1-203ENST00000490471 TMEM131LA2VDJ0 1609 aa17.08■□□□□ 0.32
CDCP1-203ENST00000490471 FAM135BQ49AJ0 1406 aa17.08■□□□□ 0.32
CDCP1-203ENST00000490471 PIK3R4Q99570 1358 aa17.08■□□□□ 0.32
CDCP1-203ENST00000490471 ZFYVE9O95405 1425 aa17.07■□□□□ 0.32
CDCP1-203ENST00000490471 NCOA3Q9Y6Q9 1424 aa17.07■□□□□ 0.32
CDCP1-203ENST00000490471 ZNF326Q5BKZ1 582 aaKnown RBP17.07■□□□□ 0.32
CDCP1-203ENST00000490471 MED1Q15648 1581 aaPredicted RBP17.06■□□□□ 0.32
CDCP1-203ENST00000490471 DIP2AQ14689 1571 aa17.05■□□□□ 0.32
CDCP1-203ENST00000490471 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
CDCP1-203ENST00000490471 ACIN1Q9UKV3 1341 aaKnown RBP17.04■□□□□ 0.32
CDCP1-203ENST00000490471 NWD1Q149M9 1564 aa17.04■□□□□ 0.32
CDCP1-203ENST00000490471 C1QBPQ07021 282 aaKnown RBP17.04■□□□□ 0.32
CDCP1-203ENST00000490471 TRIM52Q96A61 297 aa17.04■□□□□ 0.32
CDCP1-203ENST00000490471 MYO5BQ9ULV0 1848 aa17.04■□□□□ 0.32
CDCP1-203ENST00000490471 XIRP1Q702N8 1843 aaKnown RBP17.03■□□□□ 0.32
CDCP1-203ENST00000490471 ATF3P18847 181 aa17.02■□□□□ 0.32
CDCP1-203ENST00000490471 CADPS2Q86UW7 1296 aa17.02■□□□□ 0.32
CDCP1-203ENST00000490471 SLAIN2Q9P270 581 aa17.02■□□□□ 0.32
CDCP1-203ENST00000490471 CHD2O14647 1828 aaKnown RBP17.02■□□□□ 0.31
CDCP1-203ENST00000490471 ALKQ9UM73 1620 aa17.02■□□□□ 0.31
CDCP1-203ENST00000490471 KCNA4P22459 653 aa17.01■□□□□ 0.31
CDCP1-203ENST00000490471 C19orf44Q9H6X5 657 aa17.01■□□□□ 0.31
CDCP1-203ENST00000490471 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
CDCP1-203ENST00000490471 TRPM2O94759 1503 aa17■□□□□ 0.31
CDCP1-203ENST00000490471 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
CDCP1-203ENST00000490471 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
CDCP1-203ENST00000490471 RBM33Q96EV2 1170 aaKnown RBP16.97■□□□□ 0.31
CDCP1-203ENST00000490471 AMOTL2Q9Y2J4 779 aa16.97■□□□□ 0.31
CDCP1-203ENST00000490471 SLC4A1APQ9BWU0 796 aaKnown RBP16.96■□□□□ 0.31
CDCP1-203ENST00000490471 NAIPQ13075 1403 aa16.96■□□□□ 0.3
CDCP1-203ENST00000490471 ROBO1Q9Y6N7 1651 aa16.95■□□□□ 0.3
CDCP1-203ENST00000490471 KIF1BO60333 1816 aa16.94■□□□□ 0.3
CDCP1-203ENST00000490471 ADAMTS13Q76LX8 1427 aa16.94■□□□□ 0.3
CDCP1-203ENST00000490471 RPGRIP1LQ68CZ1 1315 aa16.94■□□□□ 0.3
CDCP1-203ENST00000490471 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
CDCP1-203ENST00000490471 JCADQ9P266 1359 aa16.91■□□□□ 0.3
CDCP1-203ENST00000490471 PHLPP1O60346 1717 aa16.9■□□□□ 0.3
CDCP1-203ENST00000490471 SETBP1Q9Y6X0 1596 aa16.89■□□□□ 0.3
CDCP1-203ENST00000490471 DCCP43146 1447 aa16.88■□□□□ 0.29
CDCP1-203ENST00000490471 SPATA31A6Q5VVP1 1343 aa16.88■□□□□ 0.29
CDCP1-203ENST00000490471 MEX3CQ5U5Q3 659 aaKnown RBP16.87■□□□□ 0.29
CDCP1-203ENST00000490471 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.86■□□□□ 0.29
CDCP1-203ENST00000490471 CLTCL1P53675 1640 aa16.85■□□□□ 0.29
CDCP1-203ENST00000490471 NEXMIFQ5QGS0 1516 aa16.82■□□□□ 0.28
CDCP1-203ENST00000490471 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
CDCP1-203ENST00000490471 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
CDCP1-203ENST00000490471 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
CDCP1-203ENST00000490471 ZNF772Q68DY9 489 aaPredicted RBP16.81■□□□□ 0.28
CDCP1-203ENST00000490471 METP08581 1390 aa16.8■□□□□ 0.28
CDCP1-203ENST00000490471 BRINP3Q76B58 766 aa16.8■□□□□ 0.28
CDCP1-203ENST00000490471 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
CDCP1-203ENST00000490471 XRN1Q8IZH2 1706 aaKnown RBP16.79■□□□□ 0.28
CDCP1-203ENST00000490471 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
CDCP1-203ENST00000490471 NRXN3Q9Y4C0 1643 aa16.79■□□□□ 0.28
CDCP1-203ENST00000490471 ADGRL3Q9HAR2 1447 aa16.78■□□□□ 0.28
CDCP1-203ENST00000490471 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.28
CDCP1-203ENST00000490471 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
CDCP1-203ENST00000490471 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
CDCP1-203ENST00000490471 RGL3Q3MIN7 710 aa16.75■□□□□ 0.27
CDCP1-203ENST00000490471 PTCH1Q13635 1447 aa16.75■□□□□ 0.27
CDCP1-203ENST00000490471 MST1RQ04912 1400 aa16.74■□□□□ 0.27
CDCP1-203ENST00000490471 SHPRHQ149N8 1683 aa16.74■□□□□ 0.27
CDCP1-203ENST00000490471 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
CDCP1-203ENST00000490471 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
CDCP1-203ENST00000490471 POTEAQ6S8J7 498 aa16.73■□□□□ 0.27
CDCP1-203ENST00000490471 NUTM2AQ8IVF1 878 aaPredicted RBP16.73■□□□□ 0.27
CDCP1-203ENST00000490471 ASXL1Q8IXJ9 1541 aa16.73■□□□□ 0.27
CDCP1-203ENST00000490471 SETD5Q9C0A6 1442 aa16.72■□□□□ 0.27
CDCP1-203ENST00000490471 PPLO60437 1756 aa16.72■□□□□ 0.27
CDCP1-203ENST00000490471 LRPPRCP42704 1394 aaKnown RBP16.69■□□□□ 0.26
CDCP1-203ENST00000490471 RXRBP28702 533 aa16.69■□□□□ 0.26
CDCP1-203ENST00000490471 PRAG1Q86YV5 1406 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms