RNA–Protein interactions for RNA: ENST00000490458.1

SNAP29-203, Transcript of synaptosome associated protein 29, humanhuman

TSL 2

Gene SNAP29, Length 972 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-203ENST00000490458 GCC2Q8IWJ2 1684 aa25.55■■□□□ 1.68
SNAP29-203ENST00000490458 CHD2O14647 1828 aaKnown RBP25.53■■□□□ 1.68
SNAP29-203ENST00000490458 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
SNAP29-203ENST00000490458 RPRD2Q5VT52 1461 aaKnown RBP25.52■■□□□ 1.68
SNAP29-203ENST00000490458 PHLPP1O60346 1717 aa25.51■■□□□ 1.68
SNAP29-203ENST00000490458 ZFYVE9O95405 1425 aa25.5■■□□□ 1.67
SNAP29-203ENST00000490458 MSH6P52701 1360 aa25.5■■□□□ 1.67
SNAP29-203ENST00000490458 POTEAQ6S8J7 498 aa25.5■■□□□ 1.67
SNAP29-203ENST00000490458 BCANQ96GW7 911 aa25.49■■□□□ 1.67
SNAP29-203ENST00000490458 TMEM131LA2VDJ0 1609 aa25.48■■□□□ 1.67
SNAP29-203ENST00000490458 ANKRD50Q9ULJ7 1429 aa25.47■■□□□ 1.67
SNAP29-203ENST00000490458 PLEKHG1Q9ULL1 1385 aa25.47■■□□□ 1.67
SNAP29-203ENST00000490458 RIMS2Q9UQ26 1411 aa25.46■■□□□ 1.67
SNAP29-203ENST00000490458 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
SNAP29-203ENST00000490458 UNC13BO14795 1591 aa25.43■■□□□ 1.66
SNAP29-203ENST00000490458 COL16A1Q07092 1604 aaPredicted RBP25.42■■□□□ 1.66
SNAP29-203ENST00000490458 FAM50AQ14320 339 aaKnown RBP25.42■■□□□ 1.66
SNAP29-203ENST00000490458 SLAIN2Q9P270 581 aa25.41■■□□□ 1.66
SNAP29-203ENST00000490458 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
SNAP29-203ENST00000490458 JCADQ9P266 1359 aa25.4■■□□□ 1.66
SNAP29-203ENST00000490458 E9PCH4 1651 aa25.39■■□□□ 1.66
SNAP29-203ENST00000490458 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
SNAP29-203ENST00000490458 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.35■■□□□ 1.65
SNAP29-203ENST00000490458 HDGFP51858 240 aaKnown RBP25.35■■□□□ 1.65
SNAP29-203ENST00000490458 TBX22Q9Y458 520 aa25.35■■□□□ 1.65
SNAP29-203ENST00000490458 ADAMTS13Q76LX8 1427 aa25.35■■□□□ 1.65
SNAP29-203ENST00000490458 NCOA3Q9Y6Q9 1424 aa25.34■■□□□ 1.65
SNAP29-203ENST00000490458 CHGAP10645 457 aaKnown RBP25.33■■□□□ 1.65
SNAP29-203ENST00000490458 LRP6O75581 1613 aa25.32■■□□□ 1.64
SNAP29-203ENST00000490458 IQGAP3Q86VI3 1631 aa25.32■■□□□ 1.64
SNAP29-203ENST00000490458 NUTM2DQ5VT03 806 aaPredicted RBP25.31■■□□□ 1.64
SNAP29-203ENST00000490458 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.31■■□□□ 1.64
SNAP29-203ENST00000490458 AHDC1Q5TGY3 1603 aaPredicted RBP25.3■■□□□ 1.64
SNAP29-203ENST00000490458 C14orf37Q86TY3 774 aa25.29■■□□□ 1.64
SNAP29-203ENST00000490458 SHPRHQ149N8 1683 aa25.29■■□□□ 1.64
SNAP29-203ENST00000490458 PIK3R4Q99570 1358 aa25.27■■□□□ 1.64
SNAP29-203ENST00000490458 TRPM2O94759 1503 aa25.27■■□□□ 1.64
SNAP29-203ENST00000490458 SPATA31A6Q5VVP1 1343 aa25.25■■□□□ 1.63
SNAP29-203ENST00000490458 CADPS2Q86UW7 1296 aa25.24■■□□□ 1.63
SNAP29-203ENST00000490458 PTPRUQ92729 1446 aa25.23■■□□□ 1.63
SNAP29-203ENST00000490458 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
SNAP29-203ENST00000490458 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
SNAP29-203ENST00000490458 ATF3P18847 181 aa25.22■■□□□ 1.63
SNAP29-203ENST00000490458 NRXN3Q9Y4C0 1643 aa25.21■■□□□ 1.63
SNAP29-203ENST00000490458 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.63
SNAP29-203ENST00000490458 MEX3CQ5U5Q3 659 aaKnown RBP25.2■■□□□ 1.62
SNAP29-203ENST00000490458 SPHKAPQ2M3C7 1700 aa25.18■■□□□ 1.62
SNAP29-203ENST00000490458 AMOTL2Q9Y2J4 779 aa25.18■■□□□ 1.62
SNAP29-203ENST00000490458 NUP155O75694 1391 aa25.17■■□□□ 1.62
SNAP29-203ENST00000490458 ZNF772Q68DY9 489 aaPredicted RBP25.16■■□□□ 1.62
SNAP29-203ENST00000490458 BRINP3Q76B58 766 aa25.16■■□□□ 1.62
SNAP29-203ENST00000490458 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
SNAP29-203ENST00000490458 DCCP43146 1447 aa25.15■■□□□ 1.62
SNAP29-203ENST00000490458 ASXL1Q8IXJ9 1541 aa25.15■■□□□ 1.62
SNAP29-203ENST00000490458 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
SNAP29-203ENST00000490458 TRIM52Q96A61 297 aa25.13■■□□□ 1.61
SNAP29-203ENST00000490458 MST1RQ04912 1400 aa25.11■■□□□ 1.61
SNAP29-203ENST00000490458 UPF1Q92900 1129 aaKnown RBP eCLIP25.09■■□□□ 1.61
SNAP29-203ENST00000490458 NUTM2BA6NNL0 878 aaPredicted RBP25.08■■□□□ 1.61
SNAP29-203ENST00000490458 NUTM2EB1AL46 878 aaPredicted RBP25.08■■□□□ 1.61
SNAP29-203ENST00000490458 NUTM2AQ8IVF1 878 aaPredicted RBP25.08■■□□□ 1.61
SNAP29-203ENST00000490458 SETD5Q9C0A6 1442 aa25.08■■□□□ 1.61
SNAP29-203ENST00000490458 NALCNQ8IZF0 1738 aa25.07■■□□□ 1.6
SNAP29-203ENST00000490458 ITGAEP38570 1179 aa25.07■■□□□ 1.6
SNAP29-203ENST00000490458 METP08581 1390 aa25.05■■□□□ 1.6
SNAP29-203ENST00000490458 CLTCL1P53675 1640 aa25.04■■□□□ 1.6
SNAP29-203ENST00000490458 CDK12Q9NYV4 1490 aaPredicted RBP25.04■■□□□ 1.6
SNAP29-203ENST00000490458 NEXMIFQ5QGS0 1516 aa25.04■■□□□ 1.6
SNAP29-203ENST00000490458 RXRBP28702 533 aa25.04■■□□□ 1.6
SNAP29-203ENST00000490458 ZNF326Q5BKZ1 582 aaKnown RBP25.03■■□□□ 1.6
SNAP29-203ENST00000490458 ADGRL3Q9HAR2 1447 aa25.03■■□□□ 1.6
SNAP29-203ENST00000490458 AFF2P51816 1311 aa25.02■■□□□ 1.6
SNAP29-203ENST00000490458 KIF1BO60333 1816 aa25■■□□□ 1.59
SNAP29-203ENST00000490458 PNPLA6Q8IY17 1366 aa24.98■■□□□ 1.59
SNAP29-203ENST00000490458 DDX17Q92841 729 aaKnown RBP24.98■■□□□ 1.59
SNAP29-203ENST00000490458 LRRC59Q96AG4 307 aaKnown RBP24.97■■□□□ 1.59
SNAP29-203ENST00000490458 RGS12O14924 1447 aa24.95■■□□□ 1.58
SNAP29-203ENST00000490458 LAMC1P11047 1609 aa24.94■■□□□ 1.58
SNAP29-203ENST00000490458 C8orf37Q96NL8 207 aa24.93■■□□□ 1.58
SNAP29-203ENST00000490458 C1orf167Q5SNV9 1468 aa24.92■■□□□ 1.58
SNAP29-203ENST00000490458 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
SNAP29-203ENST00000490458 PTCH1Q13635 1447 aa24.9■■□□□ 1.58
SNAP29-203ENST00000490458 RBM6P78332 1123 aaKnown RBP24.87■■□□□ 1.57
SNAP29-203ENST00000490458 QTRT2Q9H974 415 aaKnown RBP24.87■■□□□ 1.57
SNAP29-203ENST00000490458 ROBO2Q9HCK4 1378 aa24.85■■□□□ 1.57
SNAP29-203ENST00000490458 ADAMTS2O95450 1211 aa24.84■■□□□ 1.57
SNAP29-203ENST00000490458 NAIPQ13075 1403 aa24.84■■□□□ 1.57
SNAP29-203ENST00000490458 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
SNAP29-203ENST00000490458 PPLO60437 1756 aa24.83■■□□□ 1.57
SNAP29-203ENST00000490458 SOS2Q07890 1332 aaPredicted RBP24.83■■□□□ 1.56
SNAP29-203ENST00000490458 ORAI2Q96SN7 254 aa24.82■■□□□ 1.56
SNAP29-203ENST00000490458 NGLY1Q96IV0 654 aa24.81■■□□□ 1.56
SNAP29-203ENST00000490458 COL22A1Q8NFW1 1626 aaPredicted RBP24.8■■□□□ 1.56
SNAP29-203ENST00000490458 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
SNAP29-203ENST00000490458 VGFO15240 615 aaPredicted RBP24.79■■□□□ 1.56
SNAP29-203ENST00000490458 HFM1A2PYH4 1435 aa24.77■■□□□ 1.56
SNAP29-203ENST00000490458 USP21Q9UK80 565 aa24.75■■□□□ 1.55
SNAP29-203ENST00000490458 CDC42BPGQ6DT37 1551 aa24.75■■□□□ 1.55
SNAP29-203ENST00000490458 MARF1Q9Y4F3 1742 aaKnown RBP24.75■■□□□ 1.55
SNAP29-203ENST00000490458 ATAD2Q6PL18 1390 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms