RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 BCANQ96GW7 911 aa17.21■□□□□ 0.35
DUBR-204ENST00000490441 UNC13BO14795 1591 aa17.2■□□□□ 0.34
DUBR-204ENST00000490441 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
DUBR-204ENST00000490441 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
DUBR-204ENST00000490441 GCC2Q8IWJ2 1684 aa17.19■□□□□ 0.34
DUBR-204ENST00000490441 SOCS7O14512 581 aa17.18■□□□□ 0.34
DUBR-204ENST00000490441 PPP1R15AO75807 674 aaPredicted RBP17.18■□□□□ 0.34
DUBR-204ENST00000490441 HDGFP51858 240 aaKnown RBP17.18■□□□□ 0.34
DUBR-204ENST00000490441 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
DUBR-204ENST00000490441 KCNA6P17658 529 aa17.17■□□□□ 0.34
DUBR-204ENST00000490441 CNKSR2Q8WXI2 1034 aa17.17■□□□□ 0.34
DUBR-204ENST00000490441 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
DUBR-204ENST00000490441 NUP155O75694 1391 aa17.15■□□□□ 0.34
DUBR-204ENST00000490441 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
DUBR-204ENST00000490441 RIMS2Q9UQ26 1411 aa17.14■□□□□ 0.33
DUBR-204ENST00000490441 PROSER2Q86WR7 435 aaPredicted RBP17.14■□□□□ 0.33
DUBR-204ENST00000490441 MED1Q15648 1581 aaPredicted RBP17.14■□□□□ 0.33
DUBR-204ENST00000490441 IQGAP3Q86VI3 1631 aa17.14■□□□□ 0.33
DUBR-204ENST00000490441 E9PCH4 1651 aa17.13■□□□□ 0.33
DUBR-204ENST00000490441 PLEKHG1Q9ULL1 1385 aa17.13■□□□□ 0.33
DUBR-204ENST00000490441 ZFYVE9O95405 1425 aa17.13■□□□□ 0.33
DUBR-204ENST00000490441 MYO5BQ9ULV0 1848 aa17.12■□□□□ 0.33
DUBR-204ENST00000490441 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
DUBR-204ENST00000490441 XIRP1Q702N8 1843 aaKnown RBP17.12■□□□□ 0.33
DUBR-204ENST00000490441 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
DUBR-204ENST00000490441 TMEM131LA2VDJ0 1609 aa17.11■□□□□ 0.33
DUBR-204ENST00000490441 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
DUBR-204ENST00000490441 MSH6P52701 1360 aa17.07■□□□□ 0.32
DUBR-204ENST00000490441 RBM33Q96EV2 1170 aaKnown RBP17.07■□□□□ 0.32
DUBR-204ENST00000490441 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
DUBR-204ENST00000490441 NUTM2DQ5VT03 806 aaPredicted RBP17.06■□□□□ 0.32
DUBR-204ENST00000490441 TBX22Q9Y458 520 aa17.05■□□□□ 0.32
DUBR-204ENST00000490441 RRBP1Q9P2E9 1410 aaKnown RBP17.04■□□□□ 0.32
DUBR-204ENST00000490441 CHD2O14647 1828 aaKnown RBP17.03■□□□□ 0.32
DUBR-204ENST00000490441 DIP2AQ14689 1571 aa17.02■□□□□ 0.32
DUBR-204ENST00000490441 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
DUBR-204ENST00000490441 ADAMTS13Q76LX8 1427 aa17.01■□□□□ 0.31
DUBR-204ENST00000490441 SPHKAPQ2M3C7 1700 aa17.01■□□□□ 0.31
DUBR-204ENST00000490441 ROBO1Q9Y6N7 1651 aa17.01■□□□□ 0.31
DUBR-204ENST00000490441 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
DUBR-204ENST00000490441 PIK3R4Q99570 1358 aa17■□□□□ 0.31
DUBR-204ENST00000490441 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
DUBR-204ENST00000490441 TRPM2O94759 1503 aa16.98■□□□□ 0.31
DUBR-204ENST00000490441 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
DUBR-204ENST00000490441 NAIPQ13075 1403 aa16.97■□□□□ 0.31
DUBR-204ENST00000490441 TRIM52Q96A61 297 aa16.96■□□□□ 0.31
DUBR-204ENST00000490441 MAPK8IP2Q13387 824 aaPredicted RBP16.95■□□□□ 0.3
DUBR-204ENST00000490441 AMOTL2Q9Y2J4 779 aa16.95■□□□□ 0.3
DUBR-204ENST00000490441 ATF3P18847 181 aa16.94■□□□□ 0.3
DUBR-204ENST00000490441 CADPS2Q86UW7 1296 aa16.94■□□□□ 0.3
DUBR-204ENST00000490441 C19orf44Q9H6X5 657 aa16.94■□□□□ 0.3
DUBR-204ENST00000490441 HFM1A2PYH4 1435 aa16.93■□□□□ 0.3
DUBR-204ENST00000490441 SETBP1Q9Y6X0 1596 aa16.92■□□□□ 0.3
DUBR-204ENST00000490441 CLTCL1P53675 1640 aa16.92■□□□□ 0.3
DUBR-204ENST00000490441 PHLPP1O60346 1717 aa16.91■□□□□ 0.3
DUBR-204ENST00000490441 PTPRUQ92729 1446 aa16.9■□□□□ 0.3
DUBR-204ENST00000490441 KIF1BO60333 1816 aa16.89■□□□□ 0.29
DUBR-204ENST00000490441 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.89■□□□□ 0.29
DUBR-204ENST00000490441 JCADQ9P266 1359 aa16.89■□□□□ 0.29
DUBR-204ENST00000490441 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
DUBR-204ENST00000490441 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
DUBR-204ENST00000490441 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
DUBR-204ENST00000490441 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
DUBR-204ENST00000490441 METP08581 1390 aa16.86■□□□□ 0.29
DUBR-204ENST00000490441 DCCP43146 1447 aa16.86■□□□□ 0.29
DUBR-204ENST00000490441 VGFO15240 615 aaPredicted RBP16.85■□□□□ 0.29
DUBR-204ENST00000490441 COL16A1Q07092 1604 aaPredicted RBP16.84■□□□□ 0.29
DUBR-204ENST00000490441 AHDC1Q5TGY3 1603 aaPredicted RBP16.82■□□□□ 0.28
DUBR-204ENST00000490441 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
DUBR-204ENST00000490441 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
DUBR-204ENST00000490441 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
DUBR-204ENST00000490441 ADGRL3Q9HAR2 1447 aa16.8■□□□□ 0.28
DUBR-204ENST00000490441 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
DUBR-204ENST00000490441 POTEAQ6S8J7 498 aa16.79■□□□□ 0.28
DUBR-204ENST00000490441 MST1RQ04912 1400 aa16.79■□□□□ 0.28
DUBR-204ENST00000490441 ASXL1Q8IXJ9 1541 aa16.78■□□□□ 0.28
DUBR-204ENST00000490441 CCDC144AA2RUR9 1427 aa16.78■□□□□ 0.28
DUBR-204ENST00000490441 PTCH1Q13635 1447 aa16.77■□□□□ 0.27
DUBR-204ENST00000490441 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
DUBR-204ENST00000490441 PPLO60437 1756 aa16.75■□□□□ 0.27
DUBR-204ENST00000490441 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
DUBR-204ENST00000490441 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
DUBR-204ENST00000490441 LRP6O75581 1613 aa16.74■□□□□ 0.27
DUBR-204ENST00000490441 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
DUBR-204ENST00000490441 ROBO2Q9HCK4 1378 aa16.73■□□□□ 0.27
DUBR-204ENST00000490441 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
DUBR-204ENST00000490441 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
DUBR-204ENST00000490441 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
DUBR-204ENST00000490441 RGL3Q3MIN7 710 aa16.72■□□□□ 0.27
DUBR-204ENST00000490441 ZNF772Q68DY9 489 aaPredicted RBP16.72■□□□□ 0.27
DUBR-204ENST00000490441 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
DUBR-204ENST00000490441 LRRC59Q96AG4 307 aaKnown RBP16.72■□□□□ 0.27
DUBR-204ENST00000490441 SETD5Q9C0A6 1442 aa16.71■□□□□ 0.27
DUBR-204ENST00000490441 NHSL1Q5SYE7 1610 aa16.71■□□□□ 0.27
DUBR-204ENST00000490441 PRAG1Q86YV5 1406 aa16.7■□□□□ 0.26
DUBR-204ENST00000490441 C1orf167Q5SNV9 1468 aa16.7■□□□□ 0.26
DUBR-204ENST00000490441 ANKRD30BQ9BXX2 1392 aa16.7■□□□□ 0.26
DUBR-204ENST00000490441 RNF216Q9NWF9 866 aaPredicted RBP16.7■□□□□ 0.26
DUBR-204ENST00000490441 ADGRF5Q8IZF2 1346 aa16.69■□□□□ 0.26
DUBR-204ENST00000490441 DDX17Q92841 729 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms