RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 RNF40O75150 1001 aa10.12□□□□□ -0.79
PRPF4B-207ENST00000490399 NYAP1Q6ZVC0 841 aa10.12□□□□□ -0.79
PRPF4B-207ENST00000490399 PPP4CP60510 307 aa10.11□□□□□ -0.79
PRPF4B-207ENST00000490399 ITGBL1O95965 494 aaPredicted RBP10.1□□□□□ -0.79
PRPF4B-207ENST00000490399 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
PRPF4B-207ENST00000490399 METTL3Q86U44 580 aaKnown RBP10.1□□□□□ -0.79
PRPF4B-207ENST00000490399 PXYLP1Q8TE99 480 aa10.09□□□□□ -0.79
PRPF4B-207ENST00000490399 OATP04181 439 aa10.08□□□□□ -0.8
PRPF4B-207ENST00000490399 PDE4DQ08499 809 aa10.08□□□□□ -0.8
PRPF4B-207ENST00000490399 SWT1Q5T5J6 900 aaKnown RBP10.08□□□□□ -0.8
PRPF4B-207ENST00000490399 EYA1Q99502 592 aa10.08□□□□□ -0.8
PRPF4B-207ENST00000490399 A0A0G2JS52 829 aa10.07□□□□□ -0.8
PRPF4B-207ENST00000490399 HDGFP51858 240 aaKnown RBP10.07□□□□□ -0.8
PRPF4B-207ENST00000490399 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
PRPF4B-207ENST00000490399 NEUROD2Q15784 382 aa10.07□□□□□ -0.8
PRPF4B-207ENST00000490399 RBM46Q8TBY0 533 aaKnown RBP10.07□□□□□ -0.8
PRPF4B-207ENST00000490399 GPBP1L1Q9HC44 474 aaPredicted RBP10.07□□□□□ -0.8
PRPF4B-207ENST00000490399 MDM2Q00987 491 aaPredicted RBP10.05□□□□□ -0.8
PRPF4B-207ENST00000490399 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
PRPF4B-207ENST00000490399 RCCD1A6NED2 376 aa10.04□□□□□ -0.8
PRPF4B-207ENST00000490399 KCNC4Q03721 635 aa10.04□□□□□ -0.8
PRPF4B-207ENST00000490399 AMHR2Q16671 573 aa10.04□□□□□ -0.8
PRPF4B-207ENST00000490399 TTLL12Q14166 644 aaPredicted RBP10.03□□□□□ -0.8
PRPF4B-207ENST00000490399 PARP9Q8IXQ6 854 aa10.03□□□□□ -0.8
PRPF4B-207ENST00000490399 APLP1P51693 650 aa10.02□□□□□ -0.81
PRPF4B-207ENST00000490399 SLF2Q8IX21 1173 aa10.01□□□□□ -0.81
PRPF4B-207ENST00000490399 DNAJB2P25686 324 aa10□□□□□ -0.81
PRPF4B-207ENST00000490399 MTRQ99707 1265 aa10□□□□□ -0.81
PRPF4B-207ENST00000490399 TJAP1Q5JTD0 557 aa9.99□□□□□ -0.81
PRPF4B-207ENST00000490399 GIGYF2Q6Y7W6 1299 aaKnown RBP9.99□□□□□ -0.81
PRPF4B-207ENST00000490399 TMUB1Q9BVT8 246 aa9.99□□□□□ -0.81
PRPF4B-207ENST00000490399 KDM4CQ9H3R0 1056 aa9.99□□□□□ -0.81
PRPF4B-207ENST00000490399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-207ENST00000490399 CLCN1P35523 988 aa9.97□□□□□ -0.81
PRPF4B-207ENST00000490399 SLC4A3P48751 1232 aa9.97□□□□□ -0.81
PRPF4B-207ENST00000490399 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
PRPF4B-207ENST00000490399 GPCPD1Q9NPB8 672 aa9.97□□□□□ -0.81
PRPF4B-207ENST00000490399 NECTIN2Q92692 538 aa9.96□□□□□ -0.82
PRPF4B-207ENST00000490399 MS4A1P11836 297 aa9.95□□□□□ -0.82
PRPF4B-207ENST00000490399 IL21Q9HBE4 155 aa9.95□□□□□ -0.82
PRPF4B-207ENST00000490399 RGS20O76081 388 aa9.94□□□□□ -0.82
PRPF4B-207ENST00000490399 COPS2P61201 443 aa9.94□□□□□ -0.82
PRPF4B-207ENST00000490399 ZNF516Q92618 1163 aa9.94□□□□□ -0.82
PRPF4B-207ENST00000490399 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
PRPF4B-207ENST00000490399 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
PRPF4B-207ENST00000490399 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
PRPF4B-207ENST00000490399 FAM217BQ9NTX9 383 aaPredicted RBP9.93□□□□□ -0.82
PRPF4B-207ENST00000490399 DDX11L8A8MPP1 907 aa9.92□□□□□ -0.82
PRPF4B-207ENST00000490399 IL27Q8NEV9 243 aa9.92□□□□□ -0.82
PRPF4B-207ENST00000490399 CFHP08603 1231 aa9.89□□□□□ -0.83
PRPF4B-207ENST00000490399 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
PRPF4B-207ENST00000490399 PRR14Q9BWN1 585 aa9.89□□□□□ -0.83
PRPF4B-207ENST00000490399 PCDHB3Q9Y5E6 796 aa9.89□□□□□ -0.83
PRPF4B-207ENST00000490399 SLC10A3P09131 477 aa9.88□□□□□ -0.83
PRPF4B-207ENST00000490399 BLOC1S3Q6QNY0 202 aa9.88□□□□□ -0.83
PRPF4B-207ENST00000490399 RDH13Q8NBN7 331 aa9.88□□□□□ -0.83
PRPF4B-207ENST00000490399 PLEKHG3A1L390 1219 aa9.87□□□□□ -0.83
PRPF4B-207ENST00000490399 BEGAINQ9BUH8 593 aa9.87□□□□□ -0.83
PRPF4B-207ENST00000490399 PPP1R18Q6NYC8 613 aa9.86□□□□□ -0.83
PRPF4B-207ENST00000490399 CD46P15529 392 aa9.85□□□□□ -0.83
PRPF4B-207ENST00000490399 KMT5BQ4FZB7 885 aa9.85□□□□□ -0.83
PRPF4B-207ENST00000490399 SULF1Q8IWU6 871 aa9.85□□□□□ -0.83
PRPF4B-207ENST00000490399 ACTN4O43707 911 aaKnown RBP9.84□□□□□ -0.83
PRPF4B-207ENST00000490399 ZPR1O75312 459 aa9.84□□□□□ -0.83
PRPF4B-207ENST00000490399 IRX2Q9BZI1 471 aaPredicted RBP9.84□□□□□ -0.83
PRPF4B-207ENST00000490399 TLL1O43897 1013 aa9.83□□□□□ -0.84
PRPF4B-207ENST00000490399 DDRGK1Q96HY6 314 aa9.82□□□□□ -0.84
PRPF4B-207ENST00000490399 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.81□□□□□ -0.84
PRPF4B-207ENST00000490399 GCGRP47871 477 aa9.79□□□□□ -0.84
PRPF4B-207ENST00000490399 RSPH4AQ5TD94 716 aa9.79□□□□□ -0.84
PRPF4B-207ENST00000490399 PUS10Q3MIT2 529 aaKnown RBP9.78□□□□□ -0.84
PRPF4B-207ENST00000490399 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
PRPF4B-207ENST00000490399 PRKD2Q9BZL6 878 aa9.78□□□□□ -0.84
PRPF4B-207ENST00000490399 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.85
PRPF4B-207ENST00000490399 NUTM1Q86Y26 1132 aa9.77□□□□□ -0.85
PRPF4B-207ENST00000490399 SPIRE2Q8WWL2 714 aa9.77□□□□□ -0.85
PRPF4B-207ENST00000490399 GGCXP38435 758 aa9.76□□□□□ -0.85
PRPF4B-207ENST00000490399 POLR3EQ9NVU0 708 aa9.76□□□□□ -0.85
PRPF4B-207ENST00000490399 KDM4AO75164 1064 aa9.75□□□□□ -0.85
PRPF4B-207ENST00000490399 FUT2Q10981 343 aa9.75□□□□□ -0.85
PRPF4B-207ENST00000490399 HLA-CQ95604 372 aa9.75□□□□□ -0.85
PRPF4B-207ENST00000490399 NR1I2O75469 434 aa9.74□□□□□ -0.85
PRPF4B-207ENST00000490399 MYSM1Q5VVJ2 828 aa9.74□□□□□ -0.85
PRPF4B-207ENST00000490399 MOXD2PA6NHM9 499 aa9.73□□□□□ -0.85
PRPF4B-207ENST00000490399 S1PR4O95977 384 aa9.73□□□□□ -0.85
PRPF4B-207ENST00000490399 NDUFV2P19404 249 aa9.73□□□□□ -0.85
PRPF4B-207ENST00000490399 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
PRPF4B-207ENST00000490399 GUCA2AQ02747 115 aa9.72□□□□□ -0.85
PRPF4B-207ENST00000490399 SCUBE3Q8IX30 993 aa9.72□□□□□ -0.85
PRPF4B-207ENST00000490399 ADH1BP00325 375 aa9.71□□□□□ -0.86
PRPF4B-207ENST00000490399 PROCA1Q8NCQ7 364 aaPredicted RBP9.71□□□□□ -0.86
PRPF4B-207ENST00000490399 RSPH6AQ9H0K4 717 aa9.71□□□□□ -0.86
PRPF4B-207ENST00000490399 LIMD1Q9UGP4 676 aa9.71□□□□□ -0.86
PRPF4B-207ENST00000490399 ATP1B4Q9UN42 357 aaPredicted RBP9.71□□□□□ -0.86
PRPF4B-207ENST00000490399 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
PRPF4B-207ENST00000490399 PPEF1O14829 653 aaPredicted RBP9.7□□□□□ -0.86
PRPF4B-207ENST00000490399 HOXA2O43364 376 aa9.7□□□□□ -0.86
PRPF4B-207ENST00000490399 SH3D19Q5HYK7 790 aa9.7□□□□□ -0.86
PRPF4B-207ENST00000490399 CSPP1Q1MSJ5 1256 aa9.69□□□□□ -0.86
PRPF4B-207ENST00000490399 MORN1Q5T089 497 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms