RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 EID1Q9Y6B2 187 aa21.19■□□□□ 0.98
SRGAP3-208ENST00000490348 KIF1BO60333 1816 aa21.19■□□□□ 0.98
SRGAP3-208ENST00000490348 IQGAP1P46940 1657 aa21.18■□□□□ 0.98
SRGAP3-208ENST00000490348 SPATA31E1Q6ZUB1 1445 aa21.18■□□□□ 0.98
SRGAP3-208ENST00000490348 NUTM2DQ5VT03 806 aaPredicted RBP21.18■□□□□ 0.98
SRGAP3-208ENST00000490348 NEXMIFQ5QGS0 1516 aa21.16■□□□□ 0.98
SRGAP3-208ENST00000490348 DHX57Q6P158 1386 aaKnown RBP21.15■□□□□ 0.98
SRGAP3-208ENST00000490348 ZNF326Q5BKZ1 582 aaKnown RBP21.14■□□□□ 0.98
SRGAP3-208ENST00000490348 PLEKHG1Q9ULL1 1385 aa21.12■□□□□ 0.97
SRGAP3-208ENST00000490348 SENP3Q9H4L4 574 aaPredicted RBP21.12■□□□□ 0.97
SRGAP3-208ENST00000490348 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.11■□□□□ 0.97
SRGAP3-208ENST00000490348 ZNF335Q9H4Z2 1342 aaPredicted RBP21.11■□□□□ 0.97
SRGAP3-208ENST00000490348 PPP1R15AO75807 674 aaPredicted RBP21.1■□□□□ 0.97
SRGAP3-208ENST00000490348 HDGFP51858 240 aaKnown RBP21.1■□□□□ 0.97
SRGAP3-208ENST00000490348 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
SRGAP3-208ENST00000490348 LTBP4Q8N2S1 1624 aa21.08■□□□□ 0.97
SRGAP3-208ENST00000490348 SLC26A8Q96RN1 970 aa21.08■□□□□ 0.97
SRGAP3-208ENST00000490348 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
SRGAP3-208ENST00000490348 ADAMTS13Q76LX8 1427 aa21.07■□□□□ 0.96
SRGAP3-208ENST00000490348 PPLO60437 1756 aa21.07■□□□□ 0.96
SRGAP3-208ENST00000490348 NRXN3Q9Y4C0 1643 aa21.06■□□□□ 0.96
SRGAP3-208ENST00000490348 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
SRGAP3-208ENST00000490348 SETBP1Q9Y6X0 1596 aa21.04■□□□□ 0.96
SRGAP3-208ENST00000490348 BCANQ96GW7 911 aa21.03■□□□□ 0.96
SRGAP3-208ENST00000490348 STRCP1A6NGW2 1772 aa21.03■□□□□ 0.96
SRGAP3-208ENST00000490348 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.95
SRGAP3-208ENST00000490348 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.95
SRGAP3-208ENST00000490348 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
SRGAP3-208ENST00000490348 TBX22Q9Y458 520 aa21■□□□□ 0.95
SRGAP3-208ENST00000490348 DIP2AQ14689 1571 aa20.98■□□□□ 0.95
SRGAP3-208ENST00000490348 NRXN1Q9ULB1 1477 aa20.96■□□□□ 0.95
SRGAP3-208ENST00000490348 METP08581 1390 aa20.96■□□□□ 0.95
SRGAP3-208ENST00000490348 MYOM2P54296 1465 aa20.96■□□□□ 0.95
SRGAP3-208ENST00000490348 PIK3C2GO75747 1445 aa20.95■□□□□ 0.94
SRGAP3-208ENST00000490348 CERKQ8TCT0 537 aa20.95■□□□□ 0.94
SRGAP3-208ENST00000490348 SETD1AO15047 1707 aaKnown RBP20.95■□□□□ 0.94
SRGAP3-208ENST00000490348 CPS1P31327 1500 aa20.95■□□□□ 0.94
SRGAP3-208ENST00000490348 NWD1Q149M9 1564 aa20.94■□□□□ 0.94
SRGAP3-208ENST00000490348 KCNA6P17658 529 aa20.94■□□□□ 0.94
SRGAP3-208ENST00000490348 ALKQ9UM73 1620 aa20.94■□□□□ 0.94
SRGAP3-208ENST00000490348 PTPRUQ92729 1446 aa20.94■□□□□ 0.94
SRGAP3-208ENST00000490348 CHD2O14647 1828 aaKnown RBP20.93■□□□□ 0.94
SRGAP3-208ENST00000490348 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
SRGAP3-208ENST00000490348 PIK3R4Q99570 1358 aa20.92■□□□□ 0.94
SRGAP3-208ENST00000490348 LRRC7Q96NW7 1537 aa20.92■□□□□ 0.94
SRGAP3-208ENST00000490348 NEUROD1Q13562 356 aa20.91■□□□□ 0.94
SRGAP3-208ENST00000490348 KDM2AQ9Y2K7 1162 aa20.89■□□□□ 0.94
SRGAP3-208ENST00000490348 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
SRGAP3-208ENST00000490348 ASXL1Q8IXJ9 1541 aa20.87■□□□□ 0.93
SRGAP3-208ENST00000490348 XRN1Q8IZH2 1706 aaKnown RBP20.87■□□□□ 0.93
SRGAP3-208ENST00000490348 L3MBTL2Q969R5 705 aa20.87■□□□□ 0.93
SRGAP3-208ENST00000490348 AMOTL2Q9Y2J4 779 aa20.87■□□□□ 0.93
SRGAP3-208ENST00000490348 RBM33Q96EV2 1170 aaKnown RBP20.86■□□□□ 0.93
SRGAP3-208ENST00000490348 CFAP70Q5T0N1 1121 aa20.85■□□□□ 0.93
SRGAP3-208ENST00000490348 C14orf93Q9H972 538 aaKnown RBP20.85■□□□□ 0.93
SRGAP3-208ENST00000490348 IQSEC2Q5JU85 1478 aa20.85■□□□□ 0.93
SRGAP3-208ENST00000490348 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
SRGAP3-208ENST00000490348 TMEM94Q12767 1356 aa20.84■□□□□ 0.93
SRGAP3-208ENST00000490348 STAC3Q96MF2 364 aa20.84■□□□□ 0.93
SRGAP3-208ENST00000490348 TMEM132EQ6IEE7 984 aa20.82■□□□□ 0.92
SRGAP3-208ENST00000490348 PROSER2Q86WR7 435 aaPredicted RBP20.81■□□□□ 0.92
SRGAP3-208ENST00000490348 PRAG1Q86YV5 1406 aa20.81■□□□□ 0.92
SRGAP3-208ENST00000490348 LAMC1P11047 1609 aa20.8■□□□□ 0.92
SRGAP3-208ENST00000490348 ADGRB1O14514 1584 aa20.79■□□□□ 0.92
SRGAP3-208ENST00000490348 ROBO2Q9HCK4 1378 aa20.79■□□□□ 0.92
SRGAP3-208ENST00000490348 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
SRGAP3-208ENST00000490348 PTCH1Q13635 1447 aa20.77■□□□□ 0.92
SRGAP3-208ENST00000490348 LRPPRCP42704 1394 aaKnown RBP20.77■□□□□ 0.92
SRGAP3-208ENST00000490348 YTHDC2Q9H6S0 1430 aaKnown RBP20.77■□□□□ 0.91
SRGAP3-208ENST00000490348 TECPR2O15040 1411 aa20.76■□□□□ 0.91
SRGAP3-208ENST00000490348 CCER1Q8TC90 406 aaPredicted RBP20.76■□□□□ 0.91
SRGAP3-208ENST00000490348 STK26Q9P289 416 aa20.76■□□□□ 0.91
SRGAP3-208ENST00000490348 TONSLQ96HA7 1378 aa20.75■□□□□ 0.91
SRGAP3-208ENST00000490348 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
SRGAP3-208ENST00000490348 FBXO41Q8TF61 875 aa20.74■□□□□ 0.91
SRGAP3-208ENST00000490348 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
SRGAP3-208ENST00000490348 KNDC1Q76NI1 1749 aa20.72■□□□□ 0.91
SRGAP3-208ENST00000490348 UBAP1LF5GYI3 381 aa20.72■□□□□ 0.91
SRGAP3-208ENST00000490348 NBPF1Q3BBV0 1214 aa20.72■□□□□ 0.91
SRGAP3-208ENST00000490348 KIAA1210Q9ULL0 1709 aa20.71■□□□□ 0.91
SRGAP3-208ENST00000490348 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
SRGAP3-208ENST00000490348 PLEKHH1Q9ULM0 1364 aa20.7■□□□□ 0.9
SRGAP3-208ENST00000490348 WAPLQ7Z5K2 1190 aa20.69■□□□□ 0.9
SRGAP3-208ENST00000490348 MSH6P52701 1360 aa20.68■□□□□ 0.9
SRGAP3-208ENST00000490348 NALCNQ8IZF0 1738 aa20.68■□□□□ 0.9
SRGAP3-208ENST00000490348 ILDR1Q86SU0 546 aaPredicted RBP20.68■□□□□ 0.9
SRGAP3-208ENST00000490348 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.67■□□□□ 0.9
SRGAP3-208ENST00000490348 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
SRGAP3-208ENST00000490348 TRPM1Q7Z4N2 1603 aa20.67■□□□□ 0.9
SRGAP3-208ENST00000490348 C14orf37Q86TY3 774 aa20.67■□□□□ 0.9
SRGAP3-208ENST00000490348 C19orf44Q9H6X5 657 aa20.67■□□□□ 0.9
SRGAP3-208ENST00000490348 FAM135BQ49AJ0 1406 aa20.66■□□□□ 0.9
SRGAP3-208ENST00000490348 TOM1O60784 492 aa20.66■□□□□ 0.9
SRGAP3-208ENST00000490348 TRAK1Q9UPV9 953 aa20.66■□□□□ 0.9
SRGAP3-208ENST00000490348 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
SRGAP3-208ENST00000490348 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
SRGAP3-208ENST00000490348 PRAM1Q96QH2 718 aa20.63■□□□□ 0.89
SRGAP3-208ENST00000490348 DCCP43146 1447 aa20.63■□□□□ 0.89
SRGAP3-208ENST00000490348 PIP4K2BP78356 416 aa20.62■□□□□ 0.89
SRGAP3-208ENST00000490348 ARHGEF28Q8N1W1 1705 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms