RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZFYVE9O95405 1425 aa26.18■■□□□ 1.78
SEC13-218ENST00000490283 SLC26A8Q96RN1 970 aa26.18■■□□□ 1.78
SEC13-218ENST00000490283 LRRC7Q96NW7 1537 aa26.17■■□□□ 1.78
SEC13-218ENST00000490283 PLEKHG1Q9ULL1 1385 aa26.16■■□□□ 1.78
SEC13-218ENST00000490283 PIP4K2BP78356 416 aa26.14■■□□□ 1.78
SEC13-218ENST00000490283 SPHKAPQ2M3C7 1700 aa26.13■■□□□ 1.77
SEC13-218ENST00000490283 STRCP1A6NGW2 1772 aa26.12■■□□□ 1.77
SEC13-218ENST00000490283 KCNA6P17658 529 aa26.12■■□□□ 1.77
SEC13-218ENST00000490283 SLC4A1APQ9BWU0 796 aaKnown RBP26.12■■□□□ 1.77
SEC13-218ENST00000490283 MYO5BQ9ULV0 1848 aa26.11■■□□□ 1.77
SEC13-218ENST00000490283 SENP3Q9H4L4 574 aaPredicted RBP26.11■■□□□ 1.77
SEC13-218ENST00000490283 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
SEC13-218ENST00000490283 NUTM2DQ5VT03 806 aaPredicted RBP26.08■■□□□ 1.77
SEC13-218ENST00000490283 TRPM2O94759 1503 aa26.07■■□□□ 1.76
SEC13-218ENST00000490283 PROSER2Q86WR7 435 aaPredicted RBP26.05■■□□□ 1.76
SEC13-218ENST00000490283 TBX22Q9Y458 520 aa26.05■■□□□ 1.76
SEC13-218ENST00000490283 ACIN1Q9UKV3 1341 aaKnown RBP26.04■■□□□ 1.76
SEC13-218ENST00000490283 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
SEC13-218ENST00000490283 TMEM94Q12767 1356 aa26.03■■□□□ 1.76
SEC13-218ENST00000490283 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
SEC13-218ENST00000490283 CLTCL1P53675 1640 aa26■■□□□ 1.75
SEC13-218ENST00000490283 DIP2AQ14689 1571 aa26■■□□□ 1.75
SEC13-218ENST00000490283 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
SEC13-218ENST00000490283 PIK3R4Q99570 1358 aa25.97■■□□□ 1.75
SEC13-218ENST00000490283 HSPA1LP34931 641 aa25.97■■□□□ 1.75
SEC13-218ENST00000490283 SETD5Q9C0A6 1442 aa25.96■■□□□ 1.75
SEC13-218ENST00000490283 ALKQ9UM73 1620 aa25.95■■□□□ 1.74
SEC13-218ENST00000490283 DISP3Q9P2K9 1392 aa25.95■■□□□ 1.74
SEC13-218ENST00000490283 MPHOSPH9Q99550 1183 aa25.94■■□□□ 1.74
SEC13-218ENST00000490283 MSH6P52701 1360 aa25.94■■□□□ 1.74
SEC13-218ENST00000490283 KIF1BO60333 1816 aa25.93■■□□□ 1.74
SEC13-218ENST00000490283 RBM33Q96EV2 1170 aaKnown RBP25.93■■□□□ 1.74
SEC13-218ENST00000490283 XIRP1Q702N8 1843 aaKnown RBP25.91■■□□□ 1.74
SEC13-218ENST00000490283 FOXD1Q16676 465 aa25.91■■□□□ 1.74
SEC13-218ENST00000490283 CHD2O14647 1828 aaKnown RBP25.91■■□□□ 1.74
SEC13-218ENST00000490283 C14orf37Q86TY3 774 aa25.9■■□□□ 1.74
SEC13-218ENST00000490283 SETBP1Q9Y6X0 1596 aa25.9■■□□□ 1.74
SEC13-218ENST00000490283 CCDC144AA2RUR9 1427 aa25.89■■□□□ 1.74
SEC13-218ENST00000490283 NEXMIFQ5QGS0 1516 aa25.89■■□□□ 1.74
SEC13-218ENST00000490283 VGFO15240 615 aaPredicted RBP25.89■■□□□ 1.74
SEC13-218ENST00000490283 RPGRIP1LQ68CZ1 1315 aa25.88■■□□□ 1.73
SEC13-218ENST00000490283 NCOA3Q9Y6Q9 1424 aa25.88■■□□□ 1.73
SEC13-218ENST00000490283 AMOTL2Q9Y2J4 779 aa25.87■■□□□ 1.73
SEC13-218ENST00000490283 RAB3GAP2Q9H2M9 1393 aa25.84■■□□□ 1.73
SEC13-218ENST00000490283 FAM135BQ49AJ0 1406 aa25.83■■□□□ 1.73
SEC13-218ENST00000490283 NRXN3Q9Y4C0 1643 aa25.83■■□□□ 1.73
SEC13-218ENST00000490283 PTPRUQ92729 1446 aa25.8■■□□□ 1.72
SEC13-218ENST00000490283 SLAIN2Q9P270 581 aa25.79■■□□□ 1.72
SEC13-218ENST00000490283 METP08581 1390 aa25.79■■□□□ 1.72
SEC13-218ENST00000490283 ATF3P18847 181 aa25.78■■□□□ 1.72
SEC13-218ENST00000490283 CADPS2Q86UW7 1296 aa25.78■■□□□ 1.72
SEC13-218ENST00000490283 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
SEC13-218ENST00000490283 RGL3Q3MIN7 710 aa25.76■■□□□ 1.71
SEC13-218ENST00000490283 XRN1Q8IZH2 1706 aaKnown RBP25.74■■□□□ 1.71
SEC13-218ENST00000490283 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
SEC13-218ENST00000490283 ROBO1Q9Y6N7 1651 aa25.72■■□□□ 1.71
SEC13-218ENST00000490283 SPATA31E1Q6ZUB1 1445 aa25.71■■□□□ 1.71
SEC13-218ENST00000490283 PPLO60437 1756 aa25.71■■□□□ 1.71
SEC13-218ENST00000490283 HRCP23327 699 aa25.7■■□□□ 1.7
SEC13-218ENST00000490283 MED1Q15648 1581 aaPredicted RBP25.69■■□□□ 1.7
SEC13-218ENST00000490283 DCCP43146 1447 aa25.69■■□□□ 1.7
SEC13-218ENST00000490283 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
SEC13-218ENST00000490283 PHF23Q9BUL5 403 aaPredicted RBP25.66■■□□□ 1.7
SEC13-218ENST00000490283 ADGRF5Q8IZF2 1346 aa25.65■■□□□ 1.7
SEC13-218ENST00000490283 PTCH1Q13635 1447 aa25.65■■□□□ 1.7
SEC13-218ENST00000490283 ADGRL3Q9HAR2 1447 aa25.63■■□□□ 1.69
SEC13-218ENST00000490283 SETD1AO15047 1707 aaKnown RBP25.61■■□□□ 1.69
SEC13-218ENST00000490283 ILDR2Q71H61 639 aa25.61■■□□□ 1.69
SEC13-218ENST00000490283 PRAG1Q86YV5 1406 aa25.59■■□□□ 1.69
SEC13-218ENST00000490283 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
SEC13-218ENST00000490283 IFT172Q9UG01 1749 aa25.58■■□□□ 1.69
SEC13-218ENST00000490283 PHLPP1O60346 1717 aa25.57■■□□□ 1.68
SEC13-218ENST00000490283 PIK3C2GO75747 1445 aa25.57■■□□□ 1.68
SEC13-218ENST00000490283 BRINP3Q76B58 766 aa25.56■■□□□ 1.68
SEC13-218ENST00000490283 MST1RQ04912 1400 aa25.55■■□□□ 1.68
SEC13-218ENST00000490283 JCADQ9P266 1359 aa25.55■■□□□ 1.68
SEC13-218ENST00000490283 MYOM2P54296 1465 aa25.54■■□□□ 1.68
SEC13-218ENST00000490283 STK26Q9P289 416 aa25.54■■□□□ 1.68
SEC13-218ENST00000490283 NALCNQ8IZF0 1738 aa25.52■■□□□ 1.68
SEC13-218ENST00000490283 LRPPRCP42704 1394 aaKnown RBP25.52■■□□□ 1.68
SEC13-218ENST00000490283 AHDC1Q5TGY3 1603 aaPredicted RBP25.52■■□□□ 1.68
SEC13-218ENST00000490283 TMEM132EQ6IEE7 984 aa25.5■■□□□ 1.67
SEC13-218ENST00000490283 ASXL1Q8IXJ9 1541 aa25.5■■□□□ 1.67
SEC13-218ENST00000490283 TECPR2O15040 1411 aa25.49■■□□□ 1.67
SEC13-218ENST00000490283 C14orf93Q9H972 538 aaKnown RBP25.49■■□□□ 1.67
SEC13-218ENST00000490283 COL16A1Q07092 1604 aaPredicted RBP25.48■■□□□ 1.67
SEC13-218ENST00000490283 NRXN1Q9ULB1 1477 aa25.48■■□□□ 1.67
SEC13-218ENST00000490283 ABCC11Q96J66 1382 aa25.48■■□□□ 1.67
SEC13-218ENST00000490283 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
SEC13-218ENST00000490283 DHX57Q6P158 1386 aaKnown RBP25.46■■□□□ 1.67
SEC13-218ENST00000490283 LAMC1P11047 1609 aa25.46■■□□□ 1.67
SEC13-218ENST00000490283 SOCS7O14512 581 aa25.46■■□□□ 1.67
SEC13-218ENST00000490283 STAC3Q96MF2 364 aa25.46■■□□□ 1.67
SEC13-218ENST00000490283 C1orf167Q5SNV9 1468 aa25.46■■□□□ 1.67
SEC13-218ENST00000490283 CFAP70Q5T0N1 1121 aa25.45■■□□□ 1.66
SEC13-218ENST00000490283 DCAF11Q8TEB1 546 aa25.45■■□□□ 1.66
SEC13-218ENST00000490283 SPATA31A6Q5VVP1 1343 aa25.44■■□□□ 1.66
SEC13-218ENST00000490283 KDM2AQ9Y2K7 1162 aa25.44■■□□□ 1.66
SEC13-218ENST00000490283 WAPLQ7Z5K2 1190 aa25.43■■□□□ 1.66
SEC13-218ENST00000490283 KNDC1Q76NI1 1749 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms