RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 STRCP1A6NGW2 1772 aa14.54□□□□□ -0.08
CCT3-213ENST00000489870 PLEKHG1Q9ULL1 1385 aa14.53□□□□□ -0.08
CCT3-213ENST00000489870 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
CCT3-213ENST00000489870 FAM135BQ49AJ0 1406 aa14.52□□□□□ -0.08
CCT3-213ENST00000489870 PIK3R4Q99570 1358 aa14.52□□□□□ -0.08
CCT3-213ENST00000489870 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
CCT3-213ENST00000489870 NUP155O75694 1391 aa14.51□□□□□ -0.09
CCT3-213ENST00000489870 IQGAP3Q86VI3 1631 aa14.51□□□□□ -0.09
CCT3-213ENST00000489870 NKTRP30414 1462 aaKnown RBP14.5□□□□□ -0.09
CCT3-213ENST00000489870 ZFYVE9O95405 1425 aa14.5□□□□□ -0.09
CCT3-213ENST00000489870 ILDR2Q71H61 639 aa14.5□□□□□ -0.09
CCT3-213ENST00000489870 PROSER2Q86WR7 435 aaPredicted RBP14.5□□□□□ -0.09
CCT3-213ENST00000489870 ALKQ9UM73 1620 aa14.49□□□□□ -0.09
CCT3-213ENST00000489870 ACIN1Q9UKV3 1341 aaKnown RBP14.49□□□□□ -0.09
CCT3-213ENST00000489870 TMEM131LA2VDJ0 1609 aa14.48□□□□□ -0.09
CCT3-213ENST00000489870 SLC26A8Q96RN1 970 aa14.48□□□□□ -0.09
CCT3-213ENST00000489870 RIMS2Q9UQ26 1411 aa14.48□□□□□ -0.09
CCT3-213ENST00000489870 TMEM94Q12767 1356 aa14.47□□□□□ -0.09
CCT3-213ENST00000489870 PPP1R15AO75807 674 aaPredicted RBP14.47□□□□□ -0.09
CCT3-213ENST00000489870 BCANQ96GW7 911 aa14.47□□□□□ -0.09
CCT3-213ENST00000489870 RRBP1Q9P2E9 1410 aaKnown RBP14.47□□□□□ -0.09
CCT3-213ENST00000489870 NWD1Q149M9 1564 aa14.46□□□□□ -0.09
CCT3-213ENST00000489870 E9PCH4 1651 aa14.46□□□□□ -0.1
CCT3-213ENST00000489870 CHD2O14647 1828 aaKnown RBP14.45□□□□□ -0.1
CCT3-213ENST00000489870 XIRP1Q702N8 1843 aaKnown RBP14.45□□□□□ -0.1
CCT3-213ENST00000489870 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
CCT3-213ENST00000489870 DIP2AQ14689 1571 aa14.44□□□□□ -0.1
CCT3-213ENST00000489870 MSH6P52701 1360 aa14.44□□□□□ -0.1
CCT3-213ENST00000489870 SLAIN2Q9P270 581 aa14.43□□□□□ -0.1
CCT3-213ENST00000489870 C19orf44Q9H6X5 657 aa14.42□□□□□ -0.1
CCT3-213ENST00000489870 MYO5BQ9ULV0 1848 aa14.41□□□□□ -0.1
CCT3-213ENST00000489870 CHGAP10645 457 aaKnown RBP14.41□□□□□ -0.1
CCT3-213ENST00000489870 ITGAEP38570 1179 aa14.41□□□□□ -0.1
CCT3-213ENST00000489870 MED1Q15648 1581 aaPredicted RBP14.4□□□□□ -0.1
CCT3-213ENST00000489870 CADPS2Q86UW7 1296 aa14.4□□□□□ -0.1
CCT3-213ENST00000489870 ADAMTS13Q76LX8 1427 aa14.39□□□□□ -0.11
CCT3-213ENST00000489870 NAIPQ13075 1403 aa14.38□□□□□ -0.11
CCT3-213ENST00000489870 RPGRIP1LQ68CZ1 1315 aa14.38□□□□□ -0.11
CCT3-213ENST00000489870 TRPM2O94759 1503 aa14.36□□□□□ -0.11
CCT3-213ENST00000489870 SPHKAPQ2M3C7 1700 aa14.36□□□□□ -0.11
CCT3-213ENST00000489870 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
CCT3-213ENST00000489870 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
CCT3-213ENST00000489870 ATF3P18847 181 aa14.35□□□□□ -0.11
CCT3-213ENST00000489870 AMOTL2Q9Y2J4 779 aa14.35□□□□□ -0.11
CCT3-213ENST00000489870 DCCP43146 1447 aa14.34□□□□□ -0.11
CCT3-213ENST00000489870 SETBP1Q9Y6X0 1596 aa14.34□□□□□ -0.11
CCT3-213ENST00000489870 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
CCT3-213ENST00000489870 C14orf37Q86TY3 774 aa14.32□□□□□ -0.12
CCT3-213ENST00000489870 PPARGC1BQ86YN6 1023 aaKnown RBP14.32□□□□□ -0.12
CCT3-213ENST00000489870 ROBO1Q9Y6N7 1651 aa14.32□□□□□ -0.12
CCT3-213ENST00000489870 JCADQ9P266 1359 aa14.32□□□□□ -0.12
CCT3-213ENST00000489870 KIF1BO60333 1816 aa14.31□□□□□ -0.12
CCT3-213ENST00000489870 SLC4A1APQ9BWU0 796 aaKnown RBP14.3□□□□□ -0.12
CCT3-213ENST00000489870 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
CCT3-213ENST00000489870 SPATA31A6Q5VVP1 1343 aa14.29□□□□□ -0.12
CCT3-213ENST00000489870 NUTM2DQ5VT03 806 aaPredicted RBP14.28□□□□□ -0.12
CCT3-213ENST00000489870 RBM33Q96EV2 1170 aaKnown RBP14.28□□□□□ -0.12
CCT3-213ENST00000489870 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.27□□□□□ -0.12
CCT3-213ENST00000489870 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
CCT3-213ENST00000489870 PTPRUQ92729 1446 aa14.26□□□□□ -0.13
CCT3-213ENST00000489870 XRN1Q8IZH2 1706 aaKnown RBP14.25□□□□□ -0.13
CCT3-213ENST00000489870 RGS17Q9UGC6 210 aaPredicted RBP14.25□□□□□ -0.13
CCT3-213ENST00000489870 NEXMIFQ5QGS0 1516 aa14.25□□□□□ -0.13
CCT3-213ENST00000489870 PHLPP1O60346 1717 aa14.24□□□□□ -0.13
CCT3-213ENST00000489870 CLTCL1P53675 1640 aa14.24□□□□□ -0.13
CCT3-213ENST00000489870 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
CCT3-213ENST00000489870 NRXN3Q9Y4C0 1643 aa14.24□□□□□ -0.13
CCT3-213ENST00000489870 METP08581 1390 aa14.23□□□□□ -0.13
CCT3-213ENST00000489870 LRRC59Q96AG4 307 aaKnown RBP14.23□□□□□ -0.13
CCT3-213ENST00000489870 BRINP3Q76B58 766 aa14.22□□□□□ -0.13
CCT3-213ENST00000489870 PTCH1Q13635 1447 aa14.22□□□□□ -0.13
CCT3-213ENST00000489870 ADGRL3Q9HAR2 1447 aa14.22□□□□□ -0.13
CCT3-213ENST00000489870 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
CCT3-213ENST00000489870 ZNF772Q68DY9 489 aaPredicted RBP14.21□□□□□ -0.13
CCT3-213ENST00000489870 MPHOSPH9Q99550 1183 aa14.21□□□□□ -0.13
CCT3-213ENST00000489870 COL16A1Q07092 1604 aaPredicted RBP14.21□□□□□ -0.13
CCT3-213ENST00000489870 SETD5Q9C0A6 1442 aa14.2□□□□□ -0.14
CCT3-213ENST00000489870 CCDC144AA2RUR9 1427 aa14.19□□□□□ -0.14
CCT3-213ENST00000489870 HRCP23327 699 aa14.19□□□□□ -0.14
CCT3-213ENST00000489870 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
CCT3-213ENST00000489870 STAC3Q96MF2 364 aa14.19□□□□□ -0.14
CCT3-213ENST00000489870 MST1RQ04912 1400 aa14.18□□□□□ -0.14
CCT3-213ENST00000489870 SHPRHQ149N8 1683 aa14.17□□□□□ -0.14
CCT3-213ENST00000489870 POTEAQ6S8J7 498 aa14.16□□□□□ -0.14
CCT3-213ENST00000489870 PPLO60437 1756 aa14.16□□□□□ -0.14
CCT3-213ENST00000489870 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
CCT3-213ENST00000489870 SPATA31E1Q6ZUB1 1445 aa14.15□□□□□ -0.14
CCT3-213ENST00000489870 ABCC11Q96J66 1382 aa14.14□□□□□ -0.15
CCT3-213ENST00000489870 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
CCT3-213ENST00000489870 SETD1AO15047 1707 aaKnown RBP14.13□□□□□ -0.15
CCT3-213ENST00000489870 LAMC1P11047 1609 aa14.13□□□□□ -0.15
CCT3-213ENST00000489870 NHSL1Q5SYE7 1610 aa14.13□□□□□ -0.15
CCT3-213ENST00000489870 MEX3CQ5U5Q3 659 aaKnown RBP14.13□□□□□ -0.15
CCT3-213ENST00000489870 C1orf167Q5SNV9 1468 aa14.12□□□□□ -0.15
CCT3-213ENST00000489870 ROBO2Q9HCK4 1378 aa14.12□□□□□ -0.15
CCT3-213ENST00000489870 TECPR2O15040 1411 aa14.12□□□□□ -0.15
CCT3-213ENST00000489870 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
CCT3-213ENST00000489870 LRPPRCP42704 1394 aaKnown RBP14.1□□□□□ -0.15
CCT3-213ENST00000489870 C14orf93Q9H972 538 aaKnown RBP14.1□□□□□ -0.15
CCT3-213ENST00000489870 RGL3Q3MIN7 710 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms