RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 ZFYVE9O95405 1425 aa11.62□□□□□ -0.55
SSR1-210ENST00000489567 MED14O60244 1454 aa11.62□□□□□ -0.55
SSR1-210ENST00000489567 NPHP4O75161 1426 aaPredicted RBP11.61□□□□□ -0.55
SSR1-210ENST00000489567 RIMS2Q9UQ26 1411 aa11.61□□□□□ -0.55
SSR1-210ENST00000489567 NUTM2DQ5VT03 806 aaPredicted RBP11.61□□□□□ -0.55
SSR1-210ENST00000489567 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
SSR1-210ENST00000489567 CCDC144AA2RUR9 1427 aa11.59□□□□□ -0.55
SSR1-210ENST00000489567 ANKRD30BQ9BXX2 1392 aa11.59□□□□□ -0.55
SSR1-210ENST00000489567 IQGAP1P46940 1657 aa11.59□□□□□ -0.55
SSR1-210ENST00000489567 ZNF335Q9H4Z2 1342 aaPredicted RBP11.58□□□□□ -0.56
SSR1-210ENST00000489567 ZNF326Q5BKZ1 582 aaKnown RBP11.57□□□□□ -0.56
SSR1-210ENST00000489567 KIF1BO60333 1816 aa11.57□□□□□ -0.56
SSR1-210ENST00000489567 SPATA31E1Q6ZUB1 1445 aa11.57□□□□□ -0.56
SSR1-210ENST00000489567 NEXMIFQ5QGS0 1516 aa11.56□□□□□ -0.56
SSR1-210ENST00000489567 PCGF6Q9BYE7 350 aa11.56□□□□□ -0.56
SSR1-210ENST00000489567 LTBP4Q8N2S1 1624 aa11.56□□□□□ -0.56
SSR1-210ENST00000489567 PPP1R15AO75807 674 aaPredicted RBP11.55□□□□□ -0.56
SSR1-210ENST00000489567 RGL3Q3MIN7 710 aa11.55□□□□□ -0.56
SSR1-210ENST00000489567 SLC26A8Q96RN1 970 aa11.55□□□□□ -0.56
SSR1-210ENST00000489567 PLEKHG1Q9ULL1 1385 aa11.55□□□□□ -0.56
SSR1-210ENST00000489567 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
SSR1-210ENST00000489567 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
SSR1-210ENST00000489567 DHX57Q6P158 1386 aaKnown RBP11.53□□□□□ -0.56
SSR1-210ENST00000489567 ADAMTS13Q76LX8 1427 aa11.53□□□□□ -0.56
SSR1-210ENST00000489567 BCANQ96GW7 911 aa11.53□□□□□ -0.56
SSR1-210ENST00000489567 STRCP1A6NGW2 1772 aa11.52□□□□□ -0.57
SSR1-210ENST00000489567 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
SSR1-210ENST00000489567 RPGRIP1LQ68CZ1 1315 aa11.51□□□□□ -0.57
SSR1-210ENST00000489567 PPLO60437 1756 aa11.51□□□□□ -0.57
SSR1-210ENST00000489567 CERKQ8TCT0 537 aa11.51□□□□□ -0.57
SSR1-210ENST00000489567 MYT1Q01538 1121 aa11.5□□□□□ -0.57
SSR1-210ENST00000489567 ADGRF5Q8IZF2 1346 aa11.5□□□□□ -0.57
SSR1-210ENST00000489567 SETBP1Q9Y6X0 1596 aa11.49□□□□□ -0.57
SSR1-210ENST00000489567 VGFO15240 615 aaPredicted RBP11.49□□□□□ -0.57
SSR1-210ENST00000489567 TBX22Q9Y458 520 aa11.49□□□□□ -0.57
SSR1-210ENST00000489567 IFT172Q9UG01 1749 aa11.49□□□□□ -0.57
SSR1-210ENST00000489567 SIN3AQ96ST3 1273 aa11.49□□□□□ -0.57
SSR1-210ENST00000489567 METP08581 1390 aa11.47□□□□□ -0.57
SSR1-210ENST00000489567 PTPRUQ92729 1446 aa11.47□□□□□ -0.57
SSR1-210ENST00000489567 CPS1P31327 1500 aa11.47□□□□□ -0.57
SSR1-210ENST00000489567 DIP2AQ14689 1571 aa11.47□□□□□ -0.57
SSR1-210ENST00000489567 KCNA6P17658 529 aa11.46□□□□□ -0.57
SSR1-210ENST00000489567 LRRC7Q96NW7 1537 aa11.46□□□□□ -0.58
SSR1-210ENST00000489567 NWD1Q149M9 1564 aa11.46□□□□□ -0.58
SSR1-210ENST00000489567 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
SSR1-210ENST00000489567 ALKQ9UM73 1620 aa11.45□□□□□ -0.58
SSR1-210ENST00000489567 SETD1AO15047 1707 aaKnown RBP11.45□□□□□ -0.58
SSR1-210ENST00000489567 CHD2O14647 1828 aaKnown RBP11.44□□□□□ -0.58
SSR1-210ENST00000489567 PIK3C2GO75747 1445 aa11.44□□□□□ -0.58
SSR1-210ENST00000489567 DCAF11Q8TEB1 546 aa11.44□□□□□ -0.58
SSR1-210ENST00000489567 NRXN1Q9ULB1 1477 aa11.44□□□□□ -0.58
SSR1-210ENST00000489567 MYOM2P54296 1465 aa11.44□□□□□ -0.58
SSR1-210ENST00000489567 NEUROD1Q13562 356 aa11.44□□□□□ -0.58
SSR1-210ENST00000489567 KDM2AQ9Y2K7 1162 aa11.44□□□□□ -0.58
SSR1-210ENST00000489567 PIK3R4Q99570 1358 aa11.43□□□□□ -0.58
SSR1-210ENST00000489567 AMOTL2Q9Y2J4 779 aa11.43□□□□□ -0.58
SSR1-210ENST00000489567 NKTRP30414 1462 aaKnown RBP11.42□□□□□ -0.58
SSR1-210ENST00000489567 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
SSR1-210ENST00000489567 ASXL1Q8IXJ9 1541 aa11.42□□□□□ -0.58
SSR1-210ENST00000489567 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
SSR1-210ENST00000489567 IQSEC2Q5JU85 1478 aa11.42□□□□□ -0.58
SSR1-210ENST00000489567 TMEM94Q12767 1356 aa11.41□□□□□ -0.58
SSR1-210ENST00000489567 CFAP70Q5T0N1 1121 aa11.41□□□□□ -0.58
SSR1-210ENST00000489567 PROSER2Q86WR7 435 aaPredicted RBP11.41□□□□□ -0.58
SSR1-210ENST00000489567 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
SSR1-210ENST00000489567 TMEM132EQ6IEE7 984 aa11.4□□□□□ -0.58
SSR1-210ENST00000489567 L3MBTL2Q969R5 705 aa11.4□□□□□ -0.58
SSR1-210ENST00000489567 C14orf93Q9H972 538 aaKnown RBP11.4□□□□□ -0.58
SSR1-210ENST00000489567 ILDR1Q86SU0 546 aaPredicted RBP11.39□□□□□ -0.59
SSR1-210ENST00000489567 FBXO41Q8TF61 875 aa11.39□□□□□ -0.59
SSR1-210ENST00000489567 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
SSR1-210ENST00000489567 SCAF1Q9H7N4 1312 aaKnown RBP11.38□□□□□ -0.59
SSR1-210ENST00000489567 UBAP1LF5GYI3 381 aa11.37□□□□□ -0.59
SSR1-210ENST00000489567 STAC3Q96MF2 364 aa11.37□□□□□ -0.59
SSR1-210ENST00000489567 STK26Q9P289 416 aa11.37□□□□□ -0.59
SSR1-210ENST00000489567 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
SSR1-210ENST00000489567 PRAG1Q86YV5 1406 aa11.36□□□□□ -0.59
SSR1-210ENST00000489567 ADGRB1O14514 1584 aa11.36□□□□□ -0.59
SSR1-210ENST00000489567 LRPPRCP42704 1394 aaKnown RBP11.36□□□□□ -0.59
SSR1-210ENST00000489567 LAMC1P11047 1609 aa11.35□□□□□ -0.59
SSR1-210ENST00000489567 YTHDC2Q9H6S0 1430 aaKnown RBP11.35□□□□□ -0.59
SSR1-210ENST00000489567 PTCH1Q13635 1447 aa11.35□□□□□ -0.59
SSR1-210ENST00000489567 ABCC11Q96J66 1382 aa11.34□□□□□ -0.59
SSR1-210ENST00000489567 TECPR2O15040 1411 aa11.34□□□□□ -0.59
SSR1-210ENST00000489567 WAPLQ7Z5K2 1190 aa11.34□□□□□ -0.59
SSR1-210ENST00000489567 RTN4Q9NQC3 1192 aaKnown RBP11.34□□□□□ -0.59
SSR1-210ENST00000489567 NCOA3Q9Y6Q9 1424 aa11.33□□□□□ -0.59
SSR1-210ENST00000489567 PLEKHH1Q9ULM0 1364 aa11.33□□□□□ -0.6
SSR1-210ENST00000489567 TOM1O60784 492 aa11.33□□□□□ -0.6
SSR1-210ENST00000489567 PIP4K2BP78356 416 aa11.33□□□□□ -0.6
SSR1-210ENST00000489567 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
SSR1-210ENST00000489567 NBPF8Q3BBV2 869 aa11.33□□□□□ -0.6
SSR1-210ENST00000489567 C14orf37Q86TY3 774 aa11.33□□□□□ -0.6
SSR1-210ENST00000489567 MSH6P52701 1360 aa11.32□□□□□ -0.6
SSR1-210ENST00000489567 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
SSR1-210ENST00000489567 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
SSR1-210ENST00000489567 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.32□□□□□ -0.6
SSR1-210ENST00000489567 C19orf44Q9H6X5 657 aa11.32□□□□□ -0.6
SSR1-210ENST00000489567 KNDC1Q76NI1 1749 aa11.31□□□□□ -0.6
SSR1-210ENST00000489567 NALCNQ8IZF0 1738 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms