RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 PROSER2Q86WR7 435 aaPredicted RBP16.9■□□□□ 0.3
PTP4A2-206ENST00000489313 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
PTP4A2-206ENST00000489313 NOS1P29475 1434 aa16.9■□□□□ 0.3
PTP4A2-206ENST00000489313 MAPK8IP2Q13387 824 aaPredicted RBP16.88■□□□□ 0.29
PTP4A2-206ENST00000489313 MYO5BQ9ULV0 1848 aa16.87■□□□□ 0.29
PTP4A2-206ENST00000489313 BCANQ96GW7 911 aa16.87■□□□□ 0.29
PTP4A2-206ENST00000489313 NWD1Q149M9 1564 aa16.86■□□□□ 0.29
PTP4A2-206ENST00000489313 NKTRP30414 1462 aaKnown RBP16.85■□□□□ 0.29
PTP4A2-206ENST00000489313 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
PTP4A2-206ENST00000489313 ADGRL2O95490 1459 aa16.84■□□□□ 0.29
PTP4A2-206ENST00000489313 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
PTP4A2-206ENST00000489313 GCC2Q8IWJ2 1684 aa16.83■□□□□ 0.28
PTP4A2-206ENST00000489313 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
PTP4A2-206ENST00000489313 RNF39Q9H2S5 420 aa16.82■□□□□ 0.28
PTP4A2-206ENST00000489313 MSH6P52701 1360 aa16.81■□□□□ 0.28
PTP4A2-206ENST00000489313 CHD2O14647 1828 aaKnown RBP16.81■□□□□ 0.28
PTP4A2-206ENST00000489313 ZFYVE9O95405 1425 aa16.81■□□□□ 0.28
PTP4A2-206ENST00000489313 ANKRD50Q9ULJ7 1429 aa16.81■□□□□ 0.28
PTP4A2-206ENST00000489313 RPRD2Q5VT52 1461 aaKnown RBP16.81■□□□□ 0.28
PTP4A2-206ENST00000489313 PHLPP1O60346 1717 aa16.81■□□□□ 0.28
PTP4A2-206ENST00000489313 SLAIN2Q9P270 581 aa16.8■□□□□ 0.28
PTP4A2-206ENST00000489313 PLEKHG1Q9ULL1 1385 aa16.79■□□□□ 0.28
PTP4A2-206ENST00000489313 PPP1R15AO75807 674 aaPredicted RBP16.79■□□□□ 0.28
PTP4A2-206ENST00000489313 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
PTP4A2-206ENST00000489313 TMEM131LA2VDJ0 1609 aa16.79■□□□□ 0.28
PTP4A2-206ENST00000489313 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
PTP4A2-206ENST00000489313 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
PTP4A2-206ENST00000489313 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
PTP4A2-206ENST00000489313 JCADQ9P266 1359 aa16.75■□□□□ 0.27
PTP4A2-206ENST00000489313 UNC13BO14795 1591 aa16.74■□□□□ 0.27
PTP4A2-206ENST00000489313 E9PCH4 1651 aa16.74■□□□□ 0.27
PTP4A2-206ENST00000489313 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
PTP4A2-206ENST00000489313 HDGFP51858 240 aaKnown RBP16.73■□□□□ 0.27
PTP4A2-206ENST00000489313 C14orf37Q86TY3 774 aa16.72■□□□□ 0.27
PTP4A2-206ENST00000489313 TBX22Q9Y458 520 aa16.72■□□□□ 0.27
PTP4A2-206ENST00000489313 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
PTP4A2-206ENST00000489313 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
PTP4A2-206ENST00000489313 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTP4A2-206ENST00000489313 NCOA3Q9Y6Q9 1424 aa16.69■□□□□ 0.26
PTP4A2-206ENST00000489313 LRP6O75581 1613 aa16.69■□□□□ 0.26
PTP4A2-206ENST00000489313 IQGAP3Q86VI3 1631 aa16.68■□□□□ 0.26
PTP4A2-206ENST00000489313 DIP2AQ14689 1571 aa16.68■□□□□ 0.26
PTP4A2-206ENST00000489313 AHDC1Q5TGY3 1603 aaPredicted RBP16.66■□□□□ 0.26
PTP4A2-206ENST00000489313 ATF3P18847 181 aa16.66■□□□□ 0.26
PTP4A2-206ENST00000489313 CADPS2Q86UW7 1296 aa16.66■□□□□ 0.26
PTP4A2-206ENST00000489313 C19orf44Q9H6X5 657 aa16.66■□□□□ 0.26
PTP4A2-206ENST00000489313 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
PTP4A2-206ENST00000489313 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
PTP4A2-206ENST00000489313 SPATA31A6Q5VVP1 1343 aa16.65■□□□□ 0.26
PTP4A2-206ENST00000489313 PTPRUQ92729 1446 aa16.64■□□□□ 0.26
PTP4A2-206ENST00000489313 SHPRHQ149N8 1683 aa16.64■□□□□ 0.25
PTP4A2-206ENST00000489313 TRPM2O94759 1503 aa16.64■□□□□ 0.25
PTP4A2-206ENST00000489313 AMOTL2Q9Y2J4 779 aa16.64■□□□□ 0.25
PTP4A2-206ENST00000489313 ROCK1Q13464 1354 aa16.63■□□□□ 0.25
PTP4A2-206ENST00000489313 NUP155O75694 1391 aa16.63■□□□□ 0.25
PTP4A2-206ENST00000489313 ITGAEP38570 1179 aa16.61■□□□□ 0.25
PTP4A2-206ENST00000489313 BRINP3Q76B58 766 aa16.61■□□□□ 0.25
PTP4A2-206ENST00000489313 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
PTP4A2-206ENST00000489313 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
PTP4A2-206ENST00000489313 ZNF772Q68DY9 489 aaPredicted RBP16.6■□□□□ 0.25
PTP4A2-206ENST00000489313 XRN1Q8IZH2 1706 aaKnown RBP16.59■□□□□ 0.25
PTP4A2-206ENST00000489313 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
PTP4A2-206ENST00000489313 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
PTP4A2-206ENST00000489313 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
PTP4A2-206ENST00000489313 SPHKAPQ2M3C7 1700 aa16.59■□□□□ 0.25
PTP4A2-206ENST00000489313 SRCAPQ6ZRS2 3230 aa16.58■□□□□ 0.24
PTP4A2-206ENST00000489313 ASXL1Q8IXJ9 1541 aa16.57■□□□□ 0.24
PTP4A2-206ENST00000489313 SETBP1Q9Y6X0 1596 aa16.57■□□□□ 0.24
PTP4A2-206ENST00000489313 DCCP43146 1447 aa16.57■□□□□ 0.24
PTP4A2-206ENST00000489313 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.241e-16■□□□□ 9.8
PTP4A2-206ENST00000489313 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
PTP4A2-206ENST00000489313 NHSL1Q5SYE7 1610 aa16.55■□□□□ 0.24
PTP4A2-206ENST00000489313 MST1RQ04912 1400 aa16.55■□□□□ 0.24
PTP4A2-206ENST00000489313 METP08581 1390 aa16.54■□□□□ 0.24
PTP4A2-206ENST00000489313 RXRBP28702 533 aa16.54■□□□□ 0.24
PTP4A2-206ENST00000489313 PPARGC1BQ86YN6 1023 aaKnown RBP16.54■□□□□ 0.24
PTP4A2-206ENST00000489313 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.24
PTP4A2-206ENST00000489313 AFF2P51816 1311 aa16.52■□□□□ 0.24
PTP4A2-206ENST00000489313 SETD5Q9C0A6 1442 aa16.52■□□□□ 0.24
PTP4A2-206ENST00000489313 NALCNQ8IZF0 1738 aa16.51■□□□□ 0.23
PTP4A2-206ENST00000489313 CLTCL1P53675 1640 aa16.51■□□□□ 0.23
PTP4A2-206ENST00000489313 ADGRL3Q9HAR2 1447 aa16.5■□□□□ 0.23
PTP4A2-206ENST00000489313 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
PTP4A2-206ENST00000489313 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
PTP4A2-206ENST00000489313 CDK12Q9NYV4 1490 aaPredicted RBP16.48■□□□□ 0.23
PTP4A2-206ENST00000489313 KIF1BO60333 1816 aa16.47■□□□□ 0.23
PTP4A2-206ENST00000489313 C8orf37Q96NL8 207 aa16.47■□□□□ 0.23
PTP4A2-206ENST00000489313 PNPLA6Q8IY17 1366 aa16.46■□□□□ 0.23
PTP4A2-206ENST00000489313 EP400Q96L91 3159 aa16.46■□□□□ 0.22
PTP4A2-206ENST00000489313 C1QBPQ07021 282 aaKnown RBP16.45■□□□□ 0.22
PTP4A2-206ENST00000489313 RGS12O14924 1447 aa16.43■□□□□ 0.22
PTP4A2-206ENST00000489313 QTRT2Q9H974 415 aaKnown RBP16.43■□□□□ 0.22
PTP4A2-206ENST00000489313 C1orf167Q5SNV9 1468 aa16.43■□□□□ 0.22
PTP4A2-206ENST00000489313 ADAMTS2O95450 1211 aa16.43■□□□□ 0.22
PTP4A2-206ENST00000489313 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
PTP4A2-206ENST00000489313 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
PTP4A2-206ENST00000489313 ROBO2Q9HCK4 1378 aa16.41■□□□□ 0.22
PTP4A2-206ENST00000489313 NGLY1Q96IV0 654 aa16.4■□□□□ 0.22
PTP4A2-206ENST00000489313 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
PTP4A2-206ENST00000489313 LAMC1P11047 1609 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms