RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 IPO9Q96P70 1041 aaKnown RBP10.08□□□□□ -0.8
BEST3-205ENST00000488961 PHF23Q9BUL5 403 aaPredicted RBP10.08□□□□□ -0.8
BEST3-205ENST00000488961 WASHC2CQ9Y4E1 1318 aa10.08□□□□□ -0.8
BEST3-205ENST00000488961 UHRF1BP1Q6BDS2 1440 aa10.08□□□□□ -0.8
BEST3-205ENST00000488961 NEFMP07197 916 aa10.08□□□□□ -0.8
BEST3-205ENST00000488961 RSPH4AQ5TD94 716 aa10.08□□□□□ -0.8
BEST3-205ENST00000488961 NPM1P06748 294 aaKnown RBP eCLIP10.07□□□□□ -0.8
BEST3-205ENST00000488961 RCAN3Q9UKA8 241 aa10.07□□□□□ -0.8
BEST3-205ENST00000488961 TRPM1Q7Z4N2 1603 aa10.07□□□□□ -0.8
BEST3-205ENST00000488961 FANCAO15360 1455 aa10.07□□□□□ -0.8
BEST3-205ENST00000488961 ANP32AP39687 249 aaKnown RBP10.06□□□□□ -0.8
BEST3-205ENST00000488961 RALBP1Q15311 655 aa10.06□□□□□ -0.8
BEST3-205ENST00000488961 DMRT2Q9Y5R5 561 aa10.06□□□□□ -0.8
BEST3-205ENST00000488961 SLC12A5Q9H2X9 1139 aa10.05□□□□□ -0.8
BEST3-205ENST00000488961 SPINK5Q9NQ38 1064 aaPredicted RBP10.05□□□□□ -0.8
BEST3-205ENST00000488961 WDR43Q15061 677 aaKnown RBP eCLIP10.05□□□□□ -0.8
BEST3-205ENST00000488961 ADGRL1O94910 1474 aa10.05□□□□□ -0.8
BEST3-205ENST00000488961 FBLN1P23142 703 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 PPP2R1AP30153 589 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 RRP1P56182 461 aaKnown RBP10.04□□□□□ -0.8
BEST3-205ENST00000488961 RBM10P98175 930 aaKnown RBP10.04□□□□□ -0.8
BEST3-205ENST00000488961 CRBNQ96SW2 442 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 E9PCH4 1651 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 ASXL2Q76L83 1435 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 SHROOM2Q13796 1616 aa10.04□□□□□ -0.8
BEST3-205ENST00000488961 SMG6Q86US8 1419 aaKnown RBP10.04□□□□□ -0.8
BEST3-205ENST00000488961 APAF1O14727 1248 aa10.03□□□□□ -0.8
BEST3-205ENST00000488961 CARD14Q9BXL6 1004 aa10.03□□□□□ -0.8
BEST3-205ENST00000488961 ATP10AO60312 1499 aa10.03□□□□□ -0.8
BEST3-205ENST00000488961 BCL2L13Q9BXK5 485 aa10.03□□□□□ -0.8
BEST3-205ENST00000488961 PDE4CQ08493 712 aa10.02□□□□□ -0.8
BEST3-205ENST00000488961 ABCC1P33527 1531 aa10.02□□□□□ -0.81
BEST3-205ENST00000488961 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
BEST3-205ENST00000488961 MAST1Q9Y2H9 1570 aa10.02□□□□□ -0.81
BEST3-205ENST00000488961 BRD4O60885 1362 aaPredicted RBP10.02□□□□□ -0.81
BEST3-205ENST00000488961 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
BEST3-205ENST00000488961 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
BEST3-205ENST00000488961 AAMPQ13685 434 aa10.01□□□□□ -0.81
BEST3-205ENST00000488961 CABP2Q9NPB3 220 aa10.01□□□□□ -0.81
BEST3-205ENST00000488961 COL17A1Q9UMD9 1497 aaPredicted RBP10.01□□□□□ -0.81
BEST3-205ENST00000488961 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
BEST3-205ENST00000488961 FGD1P98174 961 aa10□□□□□ -0.81
BEST3-205ENST00000488961 FBXO31Q5XUX0 539 aaPredicted RBP10□□□□□ -0.81
BEST3-205ENST00000488961 WDR7Q9Y4E6 1490 aa10□□□□□ -0.81
BEST3-205ENST00000488961 BCAR3O75815 825 aa10□□□□□ -0.81
BEST3-205ENST00000488961 AMER1Q5JTC6 1135 aaPredicted RBP10□□□□□ -0.81
BEST3-205ENST00000488961 UNC13BO14795 1591 aa10□□□□□ -0.81
BEST3-205ENST00000488961 IQGAP3Q86VI3 1631 aa10□□□□□ -0.81
BEST3-205ENST00000488961 LRPPRCP42704 1394 aaKnown RBP9.99□□□□□ -0.81
BEST3-205ENST00000488961 KANK1Q14678 1352 aa9.99□□□□□ -0.81
BEST3-205ENST00000488961 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
BEST3-205ENST00000488961 SLC4A3P48751 1232 aa9.99□□□□□ -0.81
BEST3-205ENST00000488961 RGS3P49796 1198 aa9.99□□□□□ -0.81
BEST3-205ENST00000488961 NOS1P29475 1434 aa9.99□□□□□ -0.81
BEST3-205ENST00000488961 ZFYVE16Q7Z3T8 1539 aa9.99□□□□□ -0.81
BEST3-205ENST00000488961 TNNQ9UQP3 1299 aa9.98□□□□□ -0.81
BEST3-205ENST00000488961 PPM1GO15355 546 aaPredicted RBP9.98□□□□□ -0.81
BEST3-205ENST00000488961 ATP7AQ04656 1500 aa9.98□□□□□ -0.81
BEST3-205ENST00000488961 ARID4BQ4LE39 1312 aaPredicted RBP9.98□□□□□ -0.81
BEST3-205ENST00000488961 FRAT1Q92837 279 aaPredicted RBP9.97□□□□□ -0.81
BEST3-205ENST00000488961 MINK1Q8N4C8 1332 aaPredicted RBP9.97□□□□□ -0.81
BEST3-205ENST00000488961 NUTM2FA1L443 756 aa9.97□□□□□ -0.81
BEST3-205ENST00000488961 PRDM15P57071 1507 aaPredicted RBP9.97□□□□□ -0.81
BEST3-205ENST00000488961 GSE1Q14687 1217 aa9.96□□□□□ -0.81
BEST3-205ENST00000488961 CEP152O94986 1710 aa9.96□□□□□ -0.81
BEST3-205ENST00000488961 BCL11BQ9C0K0 894 aaPredicted RBP9.96□□□□□ -0.81
BEST3-205ENST00000488961 CLUAP1Q96AJ1 413 aa9.96□□□□□ -0.82
BEST3-205ENST00000488961 PLXNC1O60486 1568 aa9.96□□□□□ -0.82
BEST3-205ENST00000488961 CD109Q6YHK3 1445 aa9.95□□□□□ -0.82
BEST3-205ENST00000488961 USP35Q9P2H5 1018 aa9.95□□□□□ -0.82
BEST3-205ENST00000488961 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
BEST3-205ENST00000488961 HSP90AA2PQ14568 343 aaPredicted RBP9.95□□□□□ -0.82
BEST3-205ENST00000488961 FAM43AQ8N2R8 423 aa9.95□□□□□ -0.82
BEST3-205ENST00000488961 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
BEST3-205ENST00000488961 SPHKAPQ2M3C7 1700 aa9.95□□□□□ -0.82
BEST3-205ENST00000488961 SRPK2P78362 688 aaKnown RBP9.94□□□□□ -0.82
BEST3-205ENST00000488961 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
BEST3-205ENST00000488961 IDI1Q13907 227 aa9.94□□□□□ -0.82
BEST3-205ENST00000488961 STAG3Q9UJ98 1225 aa9.94□□□□□ -0.82
BEST3-205ENST00000488961 MADDQ8WXG6 1647 aa9.94□□□□□ -0.82
BEST3-205ENST00000488961 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
BEST3-205ENST00000488961 U2SURPO15042 1029 aaKnown RBP9.93□□□□□ -0.82
BEST3-205ENST00000488961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.93□□□□□ -0.82
BEST3-205ENST00000488961 PANK1Q8TE04 598 aa9.93□□□□□ -0.82
BEST3-205ENST00000488961 CENPJQ9HC77 1338 aaPredicted RBP9.93□□□□□ -0.82
BEST3-205ENST00000488961 SOX12O15370 315 aa9.93□□□□□ -0.82
BEST3-205ENST00000488961 PDIA4P13667 645 aaKnown RBP9.93□□□□□ -0.82
BEST3-205ENST00000488961 DUSP27Q5VZP5 1158 aa9.93□□□□□ -0.82
BEST3-205ENST00000488961 TSPOAP1O95153 1857 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 NCKAP5LQ9HCH0 1330 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 CANXP27824 592 aaKnown RBP9.92□□□□□ -0.82
BEST3-205ENST00000488961 RIMBP3CA6NJZ7 1639 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 RIMBP3BA6NNM3 1639 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 RIMBP3Q9UFD9 1639 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 SCAF11Q99590 1463 aaKnown RBP9.92□□□□□ -0.82
BEST3-205ENST00000488961 MTHFSP49914 203 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 FAM69CQ0P6D2 419 aa9.92□□□□□ -0.82
BEST3-205ENST00000488961 RNF123Q5XPI4 1314 aa9.91□□□□□ -0.82
BEST3-205ENST00000488961 GOLGA2Q08379 1002 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms