RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 CROCC2H7BZ55 1655 aa9.42□□□□□ -0.9
HDLBP-243ENST00000488923 ZNF644Q9H582 1327 aaPredicted RBP9.41□□□□□ -0.9
HDLBP-243ENST00000488923 ZSWIM6Q9HCJ5 1215 aa9.4□□□□□ -0.9
HDLBP-243ENST00000488923 ZNF777Q9ULD5 760 aaPredicted RBP9.4□□□□□ -0.9
HDLBP-243ENST00000488923 CCDC141Q6ZP82 1450 aa9.4□□□□□ -0.91
HDLBP-243ENST00000488923 C9orf84Q5VXU9 1444 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 KIAA1107Q9UPP5 1409 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 CDC42BPAQ5VT25 1732 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 PREX2Q70Z35 1606 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 VARS2Q5ST30 1063 aaKnown RBP9.39□□□□□ -0.91
HDLBP-243ENST00000488923 ZNF687Q8N1G0 1237 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 KDM5BQ9UGL1 1544 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 ANKRD50Q9ULJ7 1429 aa9.39□□□□□ -0.91
HDLBP-243ENST00000488923 RTN4Q9NQC3 1192 aaKnown RBP9.38□□□□□ -0.91
HDLBP-243ENST00000488923 RPRD2Q5VT52 1461 aaKnown RBP9.37□□□□□ -0.91
HDLBP-243ENST00000488923 MAST1Q9Y2H9 1570 aa9.37□□□□□ -0.91
HDLBP-243ENST00000488923 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
HDLBP-243ENST00000488923 ARAP3Q8WWN8 1544 aa9.36□□□□□ -0.91
HDLBP-243ENST00000488923 DENND4BO75064 1496 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-243ENST00000488923 MBD5Q9P267 1494 aa9.36□□□□□ -0.91
HDLBP-243ENST00000488923 KDM5DQ9BY66 1539 aa9.36□□□□□ -0.91
HDLBP-243ENST00000488923 KDM6BO15054 1643 aa9.35□□□□□ -0.91
HDLBP-243ENST00000488923 PLCH2O75038 1416 aa9.35□□□□□ -0.91
HDLBP-243ENST00000488923 AMER1Q5JTC6 1135 aaPredicted RBP9.35□□□□□ -0.91
HDLBP-243ENST00000488923 EFCAB2Q5VUJ9 269 aa9.35□□□□□ -0.91
HDLBP-243ENST00000488923 ARHGAP5Q13017 1502 aa9.35□□□□□ -0.91
HDLBP-243ENST00000488923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDLBP-243ENST00000488923 KIF15Q9NS87 1388 aa9.35□□□□□ -0.91
HDLBP-243ENST00000488923 PZPP20742 1482 aa9.34□□□□□ -0.91
HDLBP-243ENST00000488923 ERCC6L2Q5T890 1561 aa9.33□□□□□ -0.92
HDLBP-243ENST00000488923 SAMD9LQ8IVG5 1584 aa9.33□□□□□ -0.92
HDLBP-243ENST00000488923 TMEM92Q6UXU6 159 aa9.33□□□□□ -0.92
HDLBP-243ENST00000488923 MYO5CQ9NQX4 1742 aa9.33□□□□□ -0.92
HDLBP-243ENST00000488923 ZCCHC11Q5TAX3 1644 aaKnown RBP9.32□□□□□ -0.92
HDLBP-243ENST00000488923 SPOCK2Q92563 424 aa9.32□□□□□ -0.92
HDLBP-243ENST00000488923 CIZ1Q9ULV3 898 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-243ENST00000488923 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
HDLBP-243ENST00000488923 HNRNPMP52272 730 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDLBP-243ENST00000488923 EIF4G2P78344 907 aaKnown RBP eCLIP9.31□□□□□ -0.92
HDLBP-243ENST00000488923 IFNLR1Q8IU57 520 aaPredicted RBP9.31□□□□□ -0.92
HDLBP-243ENST00000488923 EFCAB3Q8N7B9 438 aa9.31□□□□□ -0.92
HDLBP-243ENST00000488923 NUP155O75694 1391 aa9.31□□□□□ -0.92
HDLBP-243ENST00000488923 PLXNC1O60486 1568 aa9.31□□□□□ -0.92
HDLBP-243ENST00000488923 TTC37Q6PGP7 1564 aa9.31□□□□□ -0.92
HDLBP-243ENST00000488923 WDR7Q9Y4E6 1490 aa9.3□□□□□ -0.92
HDLBP-243ENST00000488923 L3MBTL2Q969R5 705 aa9.3□□□□□ -0.92
HDLBP-243ENST00000488923 ERBINQ96RT1 1412 aa9.3□□□□□ -0.92
HDLBP-243ENST00000488923 TEX14Q8IWB6 1497 aa9.29□□□□□ -0.92
HDLBP-243ENST00000488923 PKD2Q13563 968 aa9.29□□□□□ -0.92
HDLBP-243ENST00000488923 MICALL2Q8IY33 904 aa9.29□□□□□ -0.92
HDLBP-243ENST00000488923 SYCP2Q9BX26 1530 aa9.29□□□□□ -0.92
HDLBP-243ENST00000488923 DUOX2Q9NRD8 1548 aa9.29□□□□□ -0.92
HDLBP-243ENST00000488923 RTEL1-TNFRSF6BF6WH68 1400 aa9.29□□□□□ -0.92
HDLBP-243ENST00000488923 ARHGEF12Q9NZN5 1544 aa9.28□□□□□ -0.92
HDLBP-243ENST00000488923 CCER2I3L3R5 266 aa9.28□□□□□ -0.92
HDLBP-243ENST00000488923 ANP32CO43423 234 aa9.28□□□□□ -0.92
HDLBP-243ENST00000488923 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
HDLBP-243ENST00000488923 ABCC1P33527 1531 aa9.26□□□□□ -0.93
HDLBP-243ENST00000488923 UNC13BO14795 1591 aa9.26□□□□□ -0.93
HDLBP-243ENST00000488923 DDX10Q13206 875 aaKnown RBP9.26□□□□□ -0.93
HDLBP-243ENST00000488923 ANKRD13DQ6ZTN6 518 aa9.26□□□□□ -0.93
HDLBP-243ENST00000488923 KCNH8Q96L42 1107 aa9.26□□□□□ -0.93
HDLBP-243ENST00000488923 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
HDLBP-243ENST00000488923 ABCA9Q8IUA7 1624 aa9.24□□□□□ -0.93
HDLBP-243ENST00000488923 HSPA5P11021 654 aaKnown RBP9.24□□□□□ -0.93
HDLBP-243ENST00000488923 FAM135AQ9P2D6 1515 aa9.24□□□□□ -0.93
HDLBP-243ENST00000488923 ARID4BQ4LE39 1312 aaPredicted RBP9.24□□□□□ -0.93
HDLBP-243ENST00000488923 MAGI2Q86UL8 1455 aa9.23□□□□□ -0.93
HDLBP-243ENST00000488923 MS4A4AQ96JQ5 239 aa9.23□□□□□ -0.93
HDLBP-243ENST00000488923 SPAG9O60271 1321 aaKnown RBP9.23□□□□□ -0.93
HDLBP-243ENST00000488923 FANCAO15360 1455 aa9.22□□□□□ -0.93
HDLBP-243ENST00000488923 ATP10AO60312 1499 aa9.22□□□□□ -0.93
HDLBP-243ENST00000488923 STAC3Q96MF2 364 aa9.22□□□□□ -0.93
HDLBP-243ENST00000488923 YTHDC1Q96MU7 727 aaKnown RBP9.22□□□□□ -0.93
HDLBP-243ENST00000488923 IQGAP3Q86VI3 1631 aa9.22□□□□□ -0.93
HDLBP-243ENST00000488923 CCDC144AA2RUR9 1427 aa9.22□□□□□ -0.93
HDLBP-243ENST00000488923 ASXL2Q76L83 1435 aa9.22□□□□□ -0.93
HDLBP-243ENST00000488923 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.94
HDLBP-243ENST00000488923 CFAP74Q9C0B2 1584 aa9.2□□□□□ -0.94
HDLBP-243ENST00000488923 KANK1Q14678 1352 aa9.2□□□□□ -0.94
HDLBP-243ENST00000488923 SPATA31E1Q6ZUB1 1445 aa9.2□□□□□ -0.94
HDLBP-243ENST00000488923 TRAPPC8Q9Y2L5 1435 aa9.2□□□□□ -0.94
HDLBP-243ENST00000488923 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
HDLBP-243ENST00000488923 CCDC7Q96M83 1385 aa9.19□□□□□ -0.94
HDLBP-243ENST00000488923 ZFYVE16Q7Z3T8 1539 aa9.19□□□□□ -0.94
HDLBP-243ENST00000488923 SOX12O15370 315 aa9.18□□□□□ -0.94
HDLBP-243ENST00000488923 ROCK2O75116 1388 aaKnown RBP9.18□□□□□ -0.94
HDLBP-243ENST00000488923 ADGRL1O94910 1474 aa9.18□□□□□ -0.94
HDLBP-243ENST00000488923 LSM11P83369 360 aaKnown RBP eCLIP9.18□□□□□ -0.94
HDLBP-243ENST00000488923 CNTLNQ9NXG0 1405 aa9.18□□□□□ -0.94
HDLBP-243ENST00000488923 ATP7AQ04656 1500 aa9.17□□□□□ -0.94
HDLBP-243ENST00000488923 ZNF518AQ6AHZ1 1483 aa9.17□□□□□ -0.94
HDLBP-243ENST00000488923 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
HDLBP-243ENST00000488923 WASHC2AQ641Q2 1341 aa9.17□□□□□ -0.94
HDLBP-243ENST00000488923 ARSIQ5FYB1 569 aa9.17□□□□□ -0.94
HDLBP-243ENST00000488923 GTF3C3Q9Y5Q9 886 aa9.17□□□□□ -0.94
HDLBP-243ENST00000488923 EIF2AK4Q9P2K8 1649 aaKnown RBP9.16□□□□□ -0.94
HDLBP-243ENST00000488923 INO80Q9ULG1 1556 aaPredicted RBP9.16□□□□□ -0.94
HDLBP-243ENST00000488923 USP47Q96K76 1375 aa9.16□□□□□ -0.94
HDLBP-243ENST00000488923 PBX2P40425 430 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms