RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
CCHCR1-215ENST00000488920 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
CCHCR1-215ENST00000488920 ZFYVE9O95405 1425 aa18.06■□□□□ 0.48
CCHCR1-215ENST00000488920 E9PCH4 1651 aa18.06■□□□□ 0.48
CCHCR1-215ENST00000488920 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
CCHCR1-215ENST00000488920 PROSER2Q86WR7 435 aaPredicted RBP18.05■□□□□ 0.48
CCHCR1-215ENST00000488920 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-215ENST00000488920 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.04■□□□□ 0.48
CCHCR1-215ENST00000488920 NAIPQ13075 1403 aa18.04■□□□□ 0.48
CCHCR1-215ENST00000488920 TMEM131LA2VDJ0 1609 aa18.03■□□□□ 0.48
CCHCR1-215ENST00000488920 ALKQ9UM73 1620 aa18.03■□□□□ 0.48
CCHCR1-215ENST00000488920 PLEKHG1Q9ULL1 1385 aa18.03■□□□□ 0.48
CCHCR1-215ENST00000488920 ILDR2Q71H61 639 aa18.02■□□□□ 0.48
CCHCR1-215ENST00000488920 TMEM94Q12767 1356 aa18.02■□□□□ 0.47
CCHCR1-215ENST00000488920 TRIM52Q96A61 297 aa18.01■□□□□ 0.47
CCHCR1-215ENST00000488920 TBX22Q9Y458 520 aa18■□□□□ 0.47
CCHCR1-215ENST00000488920 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
CCHCR1-215ENST00000488920 MYO5BQ9ULV0 1848 aa17.97■□□□□ 0.47
CCHCR1-215ENST00000488920 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
CCHCR1-215ENST00000488920 ADAMTS13Q76LX8 1427 aa17.93■□□□□ 0.46
CCHCR1-215ENST00000488920 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-215ENST00000488920 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-215ENST00000488920 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-215ENST00000488920 NWD1Q149M9 1564 aa17.9■□□□□ 0.46
CCHCR1-215ENST00000488920 MSH6P52701 1360 aa17.9■□□□□ 0.46
CCHCR1-215ENST00000488920 FAM135BQ49AJ0 1406 aa17.89■□□□□ 0.46
CCHCR1-215ENST00000488920 C14orf37Q86TY3 774 aa17.89■□□□□ 0.45
CCHCR1-215ENST00000488920 SLAIN2Q9P270 581 aa17.89■□□□□ 0.45
CCHCR1-215ENST00000488920 AMOTL2Q9Y2J4 779 aa17.89■□□□□ 0.45
CCHCR1-215ENST00000488920 FOXD1Q16676 465 aa17.88■□□□□ 0.45
CCHCR1-215ENST00000488920 SPHKAPQ2M3C7 1700 aa17.88■□□□□ 0.45
CCHCR1-215ENST00000488920 PIK3R4Q99570 1358 aa17.87■□□□□ 0.45
CCHCR1-215ENST00000488920 TRPM2O94759 1503 aa17.86■□□□□ 0.45
CCHCR1-215ENST00000488920 CLTCL1P53675 1640 aa17.86■□□□□ 0.45
CCHCR1-215ENST00000488920 CHD2O14647 1828 aaKnown RBP17.85■□□□□ 0.45
CCHCR1-215ENST00000488920 PTPRUQ92729 1446 aa17.85■□□□□ 0.45
CCHCR1-215ENST00000488920 MED1Q15648 1581 aaPredicted RBP17.84■□□□□ 0.45
CCHCR1-215ENST00000488920 SOCS7O14512 581 aa17.84■□□□□ 0.45
CCHCR1-215ENST00000488920 DIP2AQ14689 1571 aa17.83■□□□□ 0.45
CCHCR1-215ENST00000488920 METP08581 1390 aa17.83■□□□□ 0.45
CCHCR1-215ENST00000488920 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
CCHCR1-215ENST00000488920 C19orf44Q9H6X5 657 aa17.83■□□□□ 0.44
CCHCR1-215ENST00000488920 NCOA3Q9Y6Q9 1424 aa17.82■□□□□ 0.44
CCHCR1-215ENST00000488920 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-215ENST00000488920 VGFO15240 615 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-215ENST00000488920 ATF3P18847 181 aa17.81■□□□□ 0.44
CCHCR1-215ENST00000488920 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
CCHCR1-215ENST00000488920 CADPS2Q86UW7 1296 aa17.8■□□□□ 0.44
CCHCR1-215ENST00000488920 NEXMIFQ5QGS0 1516 aa17.79■□□□□ 0.44
CCHCR1-215ENST00000488920 RPGRIP1LQ68CZ1 1315 aa17.78■□□□□ 0.44
CCHCR1-215ENST00000488920 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
CCHCR1-215ENST00000488920 NRXN3Q9Y4C0 1643 aa17.78■□□□□ 0.44
CCHCR1-215ENST00000488920 RGL3Q3MIN7 710 aa17.76■□□□□ 0.43
CCHCR1-215ENST00000488920 SETD5Q9C0A6 1442 aa17.75■□□□□ 0.43
CCHCR1-215ENST00000488920 KIF1BO60333 1816 aa17.74■□□□□ 0.43
CCHCR1-215ENST00000488920 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
CCHCR1-215ENST00000488920 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.72■□□□□ 0.43
CCHCR1-215ENST00000488920 BRINP3Q76B58 766 aa17.71■□□□□ 0.43
CCHCR1-215ENST00000488920 RGS17Q9UGC6 210 aaPredicted RBP17.71■□□□□ 0.43
CCHCR1-215ENST00000488920 ADGRF5Q8IZF2 1346 aa17.71■□□□□ 0.42
CCHCR1-215ENST00000488920 ACIN1Q9UKV3 1341 aaKnown RBP17.71■□□□□ 0.42
CCHCR1-215ENST00000488920 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-215ENST00000488920 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
CCHCR1-215ENST00000488920 JCADQ9P266 1359 aa17.68■□□□□ 0.42
CCHCR1-215ENST00000488920 SPATA31E1Q6ZUB1 1445 aa17.68■□□□□ 0.42
CCHCR1-215ENST00000488920 ROBO2Q9HCK4 1378 aa17.67■□□□□ 0.42
CCHCR1-215ENST00000488920 DCCP43146 1447 aa17.67■□□□□ 0.42
CCHCR1-215ENST00000488920 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
CCHCR1-215ENST00000488920 MST1RQ04912 1400 aa17.65■□□□□ 0.42
CCHCR1-215ENST00000488920 ADGRL3Q9HAR2 1447 aa17.65■□□□□ 0.42
CCHCR1-215ENST00000488920 STK26Q9P289 416 aa17.65■□□□□ 0.42
CCHCR1-215ENST00000488920 ANKRD30BQ9BXX2 1392 aa17.65■□□□□ 0.42
CCHCR1-215ENST00000488920 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
CCHCR1-215ENST00000488920 DDX17Q92841 729 aaKnown RBP17.63■□□□□ 0.41
CCHCR1-215ENST00000488920 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
CCHCR1-215ENST00000488920 PPLO60437 1756 aa17.62■□□□□ 0.41
CCHCR1-215ENST00000488920 POTEAQ6S8J7 498 aa17.62■□□□□ 0.41
CCHCR1-215ENST00000488920 COL16A1Q07092 1604 aaPredicted RBP17.61■□□□□ 0.41
CCHCR1-215ENST00000488920 SPATA31A6Q5VVP1 1343 aa17.6■□□□□ 0.41
CCHCR1-215ENST00000488920 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
CCHCR1-215ENST00000488920 AHDC1Q5TGY3 1603 aaPredicted RBP17.6■□□□□ 0.41
CCHCR1-215ENST00000488920 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-215ENST00000488920 NUTM2BA6NNL0 878 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-215ENST00000488920 NUTM2EB1AL46 878 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-215ENST00000488920 MEX3CQ5U5Q3 659 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-215ENST00000488920 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
CCHCR1-215ENST00000488920 NUTM2AQ8IVF1 878 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-215ENST00000488920 ORAI2Q96SN7 254 aa17.59■□□□□ 0.41
CCHCR1-215ENST00000488920 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.41
CCHCR1-215ENST00000488920 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
CCHCR1-215ENST00000488920 LRRC59Q96AG4 307 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-215ENST00000488920 NALCNQ8IZF0 1738 aa17.57■□□□□ 0.4
CCHCR1-215ENST00000488920 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
CCHCR1-215ENST00000488920 LRPPRCP42704 1394 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-215ENST00000488920 HRCP23327 699 aa17.56■□□□□ 0.4
CCHCR1-215ENST00000488920 CFAP70Q5T0N1 1121 aa17.56■□□□□ 0.4
CCHCR1-215ENST00000488920 C14orf93Q9H972 538 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-215ENST00000488920 LRP6O75581 1613 aa17.55■□□□□ 0.4
CCHCR1-215ENST00000488920 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
CCHCR1-215ENST00000488920 PLEKHH1Q9ULM0 1364 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms