RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 ARHGAP23Q9P227 1491 aa17.75■□□□□ 0.43
TRAIP-209ENST00000488860 ZFYVE9O95405 1425 aa17.75■□□□□ 0.43
TRAIP-209ENST00000488860 NUTM2DQ5VT03 806 aaPredicted RBP17.75■□□□□ 0.43
TRAIP-209ENST00000488860 THEMISQ8N1K5 641 aaPredicted RBP17.75■□□□□ 0.43
TRAIP-209ENST00000488860 DCAF11Q8TEB1 546 aa17.75■□□□□ 0.43
TRAIP-209ENST00000488860 L3MBTL2Q969R5 705 aa17.75■□□□□ 0.43
TRAIP-209ENST00000488860 MYOM2P54296 1465 aa17.75■□□□□ 0.43
TRAIP-209ENST00000488860 AEBP2Q6ZN18 517 aaPredicted RBP17.74■□□□□ 0.43
TRAIP-209ENST00000488860 KDM2AQ9Y2K7 1162 aa17.74■□□□□ 0.43
TRAIP-209ENST00000488860 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
TRAIP-209ENST00000488860 RPGRIP1LQ68CZ1 1315 aa17.72■□□□□ 0.43
TRAIP-209ENST00000488860 SCAF11Q99590 1463 aaKnown RBP17.72■□□□□ 0.43
TRAIP-209ENST00000488860 HSPA2P54652 639 aa17.72■□□□□ 0.43
TRAIP-209ENST00000488860 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
TRAIP-209ENST00000488860 LAMC1P11047 1609 aa17.7■□□□□ 0.42
TRAIP-209ENST00000488860 EID1Q9Y6B2 187 aa17.7■□□□□ 0.42
TRAIP-209ENST00000488860 STRCQ7RTU9 1775 aa17.7■□□□□ 0.42
TRAIP-209ENST00000488860 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
TRAIP-209ENST00000488860 NRXN3Q9Y4C0 1643 aa17.69■□□□□ 0.42
TRAIP-209ENST00000488860 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.69■□□□□ 0.42
TRAIP-209ENST00000488860 TXNDC2Q86VQ3 553 aa17.68■□□□□ 0.42
TRAIP-209ENST00000488860 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
TRAIP-209ENST00000488860 TIMELESSQ9UNS1 1208 aa17.68■□□□□ 0.42
TRAIP-209ENST00000488860 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
TRAIP-209ENST00000488860 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
TRAIP-209ENST00000488860 PRAG1Q86YV5 1406 aa17.67■□□□□ 0.42
TRAIP-209ENST00000488860 HDGFP51858 240 aaKnown RBP17.67■□□□□ 0.42
TRAIP-209ENST00000488860 NRXN1Q9ULB1 1477 aa17.67■□□□□ 0.42
TRAIP-209ENST00000488860 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
TRAIP-209ENST00000488860 PIK3C2GO75747 1445 aa17.66■□□□□ 0.42
TRAIP-209ENST00000488860 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
TRAIP-209ENST00000488860 LTKP29376 864 aa17.66■□□□□ 0.42
TRAIP-209ENST00000488860 ANKLE2Q86XL3 938 aa17.66■□□□□ 0.42
TRAIP-209ENST00000488860 BCANQ96GW7 911 aa17.66■□□□□ 0.42
TRAIP-209ENST00000488860 NCKAP5LQ9HCH0 1330 aa17.65■□□□□ 0.42
TRAIP-209ENST00000488860 PLEKHG1Q9ULL1 1385 aa17.65■□□□□ 0.42
TRAIP-209ENST00000488860 ZEB1P37275 1124 aaPredicted RBP17.64■□□□□ 0.41
TRAIP-209ENST00000488860 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
TRAIP-209ENST00000488860 NPHP4O75161 1426 aaPredicted RBP17.64■□□□□ 0.41
TRAIP-209ENST00000488860 DIP2AQ14689 1571 aa17.63■□□□□ 0.41
TRAIP-209ENST00000488860 STAC3Q96MF2 364 aa17.62■□□□□ 0.41
TRAIP-209ENST00000488860 NBPF8Q3BBV2 869 aa17.61■□□□□ 0.41
TRAIP-209ENST00000488860 MED14O60244 1454 aa17.61■□□□□ 0.41
TRAIP-209ENST00000488860 RALGAPBQ86X10 1494 aa17.61■□□□□ 0.41
TRAIP-209ENST00000488860 ASXL1Q8IXJ9 1541 aa17.59■□□□□ 0.41
TRAIP-209ENST00000488860 ADAMTS13Q76LX8 1427 aa17.58■□□□□ 0.41
TRAIP-209ENST00000488860 CFAP70Q5T0N1 1121 aa17.57■□□□□ 0.4
TRAIP-209ENST00000488860 ROCK2O75116 1388 aaKnown RBP17.56■□□□□ 0.4
TRAIP-209ENST00000488860 SLC26A8Q96RN1 970 aa17.56■□□□□ 0.4
TRAIP-209ENST00000488860 KNDC1Q76NI1 1749 aa17.55■□□□□ 0.4
TRAIP-209ENST00000488860 ADGRB1O14514 1584 aa17.55■□□□□ 0.4
TRAIP-209ENST00000488860 CHD2O14647 1828 aaKnown RBP17.55■□□□□ 0.4
TRAIP-209ENST00000488860 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
TRAIP-209ENST00000488860 C14orf93Q9H972 538 aaKnown RBP17.53■□□□□ 0.4
TRAIP-209ENST00000488860 NBPF1Q3BBV0 1214 aa17.52■□□□□ 0.4
TRAIP-209ENST00000488860 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.39
TRAIP-209ENST00000488860 METP08581 1390 aa17.52■□□□□ 0.39
TRAIP-209ENST00000488860 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
TRAIP-209ENST00000488860 STRCP1A6NGW2 1772 aa17.51■□□□□ 0.39
TRAIP-209ENST00000488860 NWD1Q149M9 1564 aa17.49■□□□□ 0.39
TRAIP-209ENST00000488860 CARD11Q9BXL7 1154 aa17.49■□□□□ 0.39
TRAIP-209ENST00000488860 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
TRAIP-209ENST00000488860 TBX22Q9Y458 520 aa17.48■□□□□ 0.39
TRAIP-209ENST00000488860 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
TRAIP-209ENST00000488860 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
TRAIP-209ENST00000488860 CPS1P31327 1500 aa17.47■□□□□ 0.39
TRAIP-209ENST00000488860 STK26Q9P289 416 aa17.47■□□□□ 0.39
TRAIP-209ENST00000488860 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
TRAIP-209ENST00000488860 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
TRAIP-209ENST00000488860 LRPPRCP42704 1394 aaKnown RBP17.45■□□□□ 0.38
TRAIP-209ENST00000488860 PIK3R4Q99570 1358 aa17.45■□□□□ 0.38
TRAIP-209ENST00000488860 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
TRAIP-209ENST00000488860 USP47Q96K76 1375 aa17.43■□□□□ 0.38
TRAIP-209ENST00000488860 DLC1Q96QB1 1528 aa17.43■□□□□ 0.38
TRAIP-209ENST00000488860 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
TRAIP-209ENST00000488860 AMOTL2Q9Y2J4 779 aa17.41■□□□□ 0.38
TRAIP-209ENST00000488860 NKTRP30414 1462 aaKnown RBP17.41■□□□□ 0.38
TRAIP-209ENST00000488860 TECPR2O15040 1411 aa17.4■□□□□ 0.38
TRAIP-209ENST00000488860 PTCH1Q13635 1447 aa17.4■□□□□ 0.38
TRAIP-209ENST00000488860 NALCNQ8IZF0 1738 aa17.4■□□□□ 0.38
TRAIP-209ENST00000488860 ZNF335Q9H4Z2 1342 aaPredicted RBP17.4■□□□□ 0.38
TRAIP-209ENST00000488860 KCNA6P17658 529 aa17.39■□□□□ 0.37
TRAIP-209ENST00000488860 XIRP1Q702N8 1843 aaKnown RBP17.39■□□□□ 0.37
TRAIP-209ENST00000488860 ABCC11Q96J66 1382 aa17.39■□□□□ 0.37
TRAIP-209ENST00000488860 ROBO2Q9HCK4 1378 aa17.38■□□□□ 0.37
TRAIP-209ENST00000488860 EIF4G2P78344 907 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAIP-209ENST00000488860 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.37■□□□□ 0.37
TRAIP-209ENST00000488860 SAFB2Q14151 953 aaKnown RBP eCLIP17.36■□□□□ 0.37
TRAIP-209ENST00000488860 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
TRAIP-209ENST00000488860 POGKQ9P215 609 aa17.36■□□□□ 0.37
TRAIP-209ENST00000488860 PLEKHH1Q9ULM0 1364 aa17.36■□□□□ 0.37
TRAIP-209ENST00000488860 HSPA5P11021 654 aaKnown RBP17.35■□□□□ 0.37
TRAIP-209ENST00000488860 CENPJQ9HC77 1338 aaPredicted RBP17.35■□□□□ 0.37
TRAIP-209ENST00000488860 FAM135BQ49AJ0 1406 aa17.35■□□□□ 0.37
TRAIP-209ENST00000488860 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
TRAIP-209ENST00000488860 HIRIP3Q9BW71 556 aaPredicted RBP17.34■□□□□ 0.37
TRAIP-209ENST00000488860 ST20-MTHFSA0A0A6YYL1 179 aa17.32■□□□□ 0.36
TRAIP-209ENST00000488860 RBM33Q96EV2 1170 aaKnown RBP17.32■□□□□ 0.36
TRAIP-209ENST00000488860 LTBP4Q8N2S1 1624 aa17.32■□□□□ 0.36
TRAIP-209ENST00000488860 ADGRB2O60241 1585 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms