RNA–Protein interactions for RNA: ENST00000488839.1

SFXN5-219, Transcript of sideroflexin 5, humanhuman

TSL 3

Gene SFXN5, Length 671 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-219ENST00000488839 ZNF335Q9H4Z2 1342 aaPredicted RBP18.75■□□□□ 0.59
SFXN5-219ENST00000488839 IDI1Q13907 227 aa18.75■□□□□ 0.59
SFXN5-219ENST00000488839 MYCNP04198 464 aaPredicted RBP18.74■□□□□ 0.59
SFXN5-219ENST00000488839 STAG3Q9UJ98 1225 aa18.74■□□□□ 0.59
SFXN5-219ENST00000488839 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
SFXN5-219ENST00000488839 POLA2Q14181 598 aa18.73■□□□□ 0.59
SFXN5-219ENST00000488839 GCC2Q8IWJ2 1684 aa18.73■□□□□ 0.59
SFXN5-219ENST00000488839 SCAF11Q99590 1463 aaKnown RBP18.72■□□□□ 0.59
SFXN5-219ENST00000488839 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
SFXN5-219ENST00000488839 TXNDC2Q86VQ3 553 aa18.72■□□□□ 0.59
SFXN5-219ENST00000488839 PIK3C2BO00750 1634 aa18.71■□□□□ 0.59
SFXN5-219ENST00000488839 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
SFXN5-219ENST00000488839 NUP155O75694 1391 aa18.71■□□□□ 0.59
SFXN5-219ENST00000488839 CPS1P31327 1500 aa18.71■□□□□ 0.59
SFXN5-219ENST00000488839 SYNMO15061 1565 aa18.71■□□□□ 0.59
SFXN5-219ENST00000488839 CHRDL2Q6WN34 429 aa18.7■□□□□ 0.58
SFXN5-219ENST00000488839 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
SFXN5-219ENST00000488839 LTKP29376 864 aa18.68■□□□□ 0.58
SFXN5-219ENST00000488839 HDGFP51858 240 aaKnown RBP18.68■□□□□ 0.58
SFXN5-219ENST00000488839 NAIPQ13075 1403 aa18.66■□□□□ 0.58
SFXN5-219ENST00000488839 ADGRB3O60242 1522 aa18.66■□□□□ 0.58
SFXN5-219ENST00000488839 HFM1A2PYH4 1435 aa18.65■□□□□ 0.58
SFXN5-219ENST00000488839 E9PCH4 1651 aa18.64■□□□□ 0.57
SFXN5-219ENST00000488839 ACIN1Q9UKV3 1341 aaKnown RBP18.62■□□□□ 0.57
SFXN5-219ENST00000488839 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
SFXN5-219ENST00000488839 TMEM131LA2VDJ0 1609 aa18.59■□□□□ 0.57
SFXN5-219ENST00000488839 UBAP1LF5GYI3 381 aa18.58■□□□□ 0.56
SFXN5-219ENST00000488839 TOM1O60784 492 aa18.58■□□□□ 0.56
SFXN5-219ENST00000488839 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
SFXN5-219ENST00000488839 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
SFXN5-219ENST00000488839 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
SFXN5-219ENST00000488839 KCNA6P17658 529 aa18.54■□□□□ 0.56
SFXN5-219ENST00000488839 LRRC7Q96NW7 1537 aa18.54■□□□□ 0.56
SFXN5-219ENST00000488839 CHGAP10645 457 aaKnown RBP18.53■□□□□ 0.56
SFXN5-219ENST00000488839 PPP1R15AO75807 674 aaPredicted RBP18.52■□□□□ 0.56
SFXN5-219ENST00000488839 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
SFXN5-219ENST00000488839 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.55
SFXN5-219ENST00000488839 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
SFXN5-219ENST00000488839 STRCP1A6NGW2 1772 aa18.5■□□□□ 0.55
SFXN5-219ENST00000488839 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
SFXN5-219ENST00000488839 BCANQ96GW7 911 aa18.49■□□□□ 0.55
SFXN5-219ENST00000488839 SLC4A1APQ9BWU0 796 aaKnown RBP18.49■□□□□ 0.55
SFXN5-219ENST00000488839 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
SFXN5-219ENST00000488839 TRPM2O94759 1503 aa18.49■□□□□ 0.55
SFXN5-219ENST00000488839 PIK3R4Q99570 1358 aa18.47■□□□□ 0.55
SFXN5-219ENST00000488839 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
SFXN5-219ENST00000488839 DIP2AQ14689 1571 aa18.45■□□□□ 0.54
SFXN5-219ENST00000488839 NWD1Q149M9 1564 aa18.45■□□□□ 0.54
SFXN5-219ENST00000488839 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
SFXN5-219ENST00000488839 ADAMTS13Q76LX8 1427 aa18.42■□□□□ 0.54
SFXN5-219ENST00000488839 NCOA3Q9Y6Q9 1424 aa18.42■□□□□ 0.54
SFXN5-219ENST00000488839 ZNF326Q5BKZ1 582 aaKnown RBP18.42■□□□□ 0.54
SFXN5-219ENST00000488839 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
SFXN5-219ENST00000488839 SETD5Q9C0A6 1442 aa18.41■□□□□ 0.54
SFXN5-219ENST00000488839 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
SFXN5-219ENST00000488839 RPGRIP1LQ68CZ1 1315 aa18.41■□□□□ 0.54
SFXN5-219ENST00000488839 CLTCL1P53675 1640 aa18.41■□□□□ 0.54
SFXN5-219ENST00000488839 CHD2O14647 1828 aaKnown RBP18.4■□□□□ 0.54
SFXN5-219ENST00000488839 PIP4K2BP78356 416 aa18.4■□□□□ 0.54
SFXN5-219ENST00000488839 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
SFXN5-219ENST00000488839 KIF1BO60333 1816 aa18.39■□□□□ 0.54
SFXN5-219ENST00000488839 ALKQ9UM73 1620 aa18.39■□□□□ 0.53
SFXN5-219ENST00000488839 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-219ENST00000488839 NUTM2DQ5VT03 806 aaPredicted RBP18.38■□□□□ 0.53
SFXN5-219ENST00000488839 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
SFXN5-219ENST00000488839 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
SFXN5-219ENST00000488839 HRCP23327 699 aa18.37■□□□□ 0.53
SFXN5-219ENST00000488839 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
SFXN5-219ENST00000488839 NEXMIFQ5QGS0 1516 aa18.35■□□□□ 0.53
SFXN5-219ENST00000488839 HSPA1LP34931 641 aa18.35■□□□□ 0.53
SFXN5-219ENST00000488839 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
SFXN5-219ENST00000488839 MSH6P52701 1360 aa18.34■□□□□ 0.53
SFXN5-219ENST00000488839 CCDC144AA2RUR9 1427 aa18.33■□□□□ 0.53
SFXN5-219ENST00000488839 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.52
SFXN5-219ENST00000488839 NRXN3Q9Y4C0 1643 aa18.31■□□□□ 0.52
SFXN5-219ENST00000488839 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
SFXN5-219ENST00000488839 C19orf44Q9H6X5 657 aa18.3■□□□□ 0.52
SFXN5-219ENST00000488839 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
SFXN5-219ENST00000488839 CADPS2Q86UW7 1296 aa18.28■□□□□ 0.52
SFXN5-219ENST00000488839 PTPRUQ92729 1446 aa18.27■□□□□ 0.52
SFXN5-219ENST00000488839 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
SFXN5-219ENST00000488839 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
SFXN5-219ENST00000488839 SLAIN2Q9P270 581 aa18.27■□□□□ 0.52
SFXN5-219ENST00000488839 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.51
SFXN5-219ENST00000488839 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.51
SFXN5-219ENST00000488839 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
SFXN5-219ENST00000488839 RBM33Q96EV2 1170 aaKnown RBP18.26■□□□□ 0.51
SFXN5-219ENST00000488839 METP08581 1390 aa18.26■□□□□ 0.51
SFXN5-219ENST00000488839 C14orf37Q86TY3 774 aa18.25■□□□□ 0.51
SFXN5-219ENST00000488839 XRN1Q8IZH2 1706 aaKnown RBP18.25■□□□□ 0.51
SFXN5-219ENST00000488839 ATF3P18847 181 aa18.24■□□□□ 0.51
SFXN5-219ENST00000488839 PPLO60437 1756 aa18.24■□□□□ 0.51
SFXN5-219ENST00000488839 DCCP43146 1447 aa18.23■□□□□ 0.51
SFXN5-219ENST00000488839 PRAG1Q86YV5 1406 aa18.23■□□□□ 0.51
SFXN5-219ENST00000488839 RGL3Q3MIN7 710 aa18.2■□□□□ 0.5
SFXN5-219ENST00000488839 REM2Q8IYK8 340 aaPredicted RBP18.2■□□□□ 0.5
SFXN5-219ENST00000488839 ROBO1Q9Y6N7 1651 aa18.19■□□□□ 0.5
SFXN5-219ENST00000488839 PTCH1Q13635 1447 aa18.19■□□□□ 0.5
SFXN5-219ENST00000488839 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.19■□□□□ 0.5
SFXN5-219ENST00000488839 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms