RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 E9PCH4 1651 aa19.88■□□□□ 0.77
ATPAF2-207ENST00000488753 TMEM131LA2VDJ0 1609 aa19.88■□□□□ 0.77
ATPAF2-207ENST00000488753 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.88■□□□□ 0.77
ATPAF2-207ENST00000488753 RIMS2Q9UQ26 1411 aa19.87■□□□□ 0.77
ATPAF2-207ENST00000488753 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
ATPAF2-207ENST00000488753 ILDR2Q71H61 639 aa19.85■□□□□ 0.77
ATPAF2-207ENST00000488753 NKTRP30414 1462 aaKnown RBP19.85■□□□□ 0.77
ATPAF2-207ENST00000488753 TMEM94Q12767 1356 aa19.84■□□□□ 0.77
ATPAF2-207ENST00000488753 BCANQ96GW7 911 aa19.84■□□□□ 0.77
ATPAF2-207ENST00000488753 NWD1Q149M9 1564 aa19.83■□□□□ 0.77
ATPAF2-207ENST00000488753 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.77
ATPAF2-207ENST00000488753 TBX22Q9Y458 520 aa19.82■□□□□ 0.76
ATPAF2-207ENST00000488753 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
ATPAF2-207ENST00000488753 NAIPQ13075 1403 aa19.81■□□□□ 0.76
ATPAF2-207ENST00000488753 XIRP1Q702N8 1843 aaKnown RBP19.79■□□□□ 0.76
ATPAF2-207ENST00000488753 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
ATPAF2-207ENST00000488753 MYO5BQ9ULV0 1848 aa19.79■□□□□ 0.76
ATPAF2-207ENST00000488753 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
ATPAF2-207ENST00000488753 SOCS7O14512 581 aa19.77■□□□□ 0.76
ATPAF2-207ENST00000488753 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
ATPAF2-207ENST00000488753 ADAMTS13Q76LX8 1427 aa19.76■□□□□ 0.75
ATPAF2-207ENST00000488753 DIP2AQ14689 1571 aa19.76■□□□□ 0.75
ATPAF2-207ENST00000488753 MED1Q15648 1581 aaPredicted RBP19.76■□□□□ 0.75
ATPAF2-207ENST00000488753 NCOA3Q9Y6Q9 1424 aa19.76■□□□□ 0.75
ATPAF2-207ENST00000488753 MSH6P52701 1360 aa19.74■□□□□ 0.75
ATPAF2-207ENST00000488753 SPHKAPQ2M3C7 1700 aa19.73■□□□□ 0.75
ATPAF2-207ENST00000488753 NUTM2DQ5VT03 806 aaPredicted RBP19.72■□□□□ 0.75
ATPAF2-207ENST00000488753 RBM33Q96EV2 1170 aaKnown RBP19.72■□□□□ 0.75
ATPAF2-207ENST00000488753 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
ATPAF2-207ENST00000488753 CHD2O14647 1828 aaKnown RBP19.72■□□□□ 0.75
ATPAF2-207ENST00000488753 TRPM2O94759 1503 aa19.71■□□□□ 0.75
ATPAF2-207ENST00000488753 ZNF326Q5BKZ1 582 aaKnown RBP19.68■□□□□ 0.74
ATPAF2-207ENST00000488753 SLAIN2Q9P270 581 aa19.68■□□□□ 0.74
ATPAF2-207ENST00000488753 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
ATPAF2-207ENST00000488753 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
ATPAF2-207ENST00000488753 CLTCL1P53675 1640 aa19.65■□□□□ 0.74
ATPAF2-207ENST00000488753 PHF23Q9BUL5 403 aaPredicted RBP19.65■□□□□ 0.74
ATPAF2-207ENST00000488753 AMOTL2Q9Y2J4 779 aa19.65■□□□□ 0.74
ATPAF2-207ENST00000488753 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
ATPAF2-207ENST00000488753 C19orf44Q9H6X5 657 aa19.64■□□□□ 0.73
ATPAF2-207ENST00000488753 ROBO1Q9Y6N7 1651 aa19.64■□□□□ 0.73
ATPAF2-207ENST00000488753 PTPRUQ92729 1446 aa19.63■□□□□ 0.73
ATPAF2-207ENST00000488753 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
ATPAF2-207ENST00000488753 CADPS2Q86UW7 1296 aa19.63■□□□□ 0.73
ATPAF2-207ENST00000488753 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
ATPAF2-207ENST00000488753 NEXMIFQ5QGS0 1516 aa19.61■□□□□ 0.73
ATPAF2-207ENST00000488753 VGFO15240 615 aaPredicted RBP19.59■□□□□ 0.73
ATPAF2-207ENST00000488753 ATF3P18847 181 aa19.59■□□□□ 0.73
ATPAF2-207ENST00000488753 DCCP43146 1447 aa19.59■□□□□ 0.73
ATPAF2-207ENST00000488753 METP08581 1390 aa19.58■□□□□ 0.73
ATPAF2-207ENST00000488753 RPGRIP1LQ68CZ1 1315 aa19.58■□□□□ 0.73
ATPAF2-207ENST00000488753 ACIN1Q9UKV3 1341 aaKnown RBP19.57■□□□□ 0.72
ATPAF2-207ENST00000488753 XRN1Q8IZH2 1706 aaKnown RBP19.57■□□□□ 0.72
ATPAF2-207ENST00000488753 KIF1BO60333 1816 aa19.56■□□□□ 0.72
ATPAF2-207ENST00000488753 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.54■□□□□ 0.72
ATPAF2-207ENST00000488753 JCADQ9P266 1359 aa19.54■□□□□ 0.72
ATPAF2-207ENST00000488753 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
ATPAF2-207ENST00000488753 MPHOSPH9Q99550 1183 aa19.51■□□□□ 0.71
ATPAF2-207ENST00000488753 RGS17Q9UGC6 210 aaPredicted RBP19.51■□□□□ 0.71
ATPAF2-207ENST00000488753 AHDC1Q5TGY3 1603 aaPredicted RBP19.5■□□□□ 0.71
ATPAF2-207ENST00000488753 CCDC144AA2RUR9 1427 aa19.5■□□□□ 0.71
ATPAF2-207ENST00000488753 PRAG1Q86YV5 1406 aa19.5■□□□□ 0.71
ATPAF2-207ENST00000488753 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
ATPAF2-207ENST00000488753 COL16A1Q07092 1604 aaPredicted RBP19.49■□□□□ 0.71
ATPAF2-207ENST00000488753 PTCH1Q13635 1447 aa19.49■□□□□ 0.71
ATPAF2-207ENST00000488753 ADGRL3Q9HAR2 1447 aa19.49■□□□□ 0.71
ATPAF2-207ENST00000488753 FOXD1Q16676 465 aa19.48■□□□□ 0.71
ATPAF2-207ENST00000488753 MST1RQ04912 1400 aa19.47■□□□□ 0.71
ATPAF2-207ENST00000488753 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
ATPAF2-207ENST00000488753 SPATA31E1Q6ZUB1 1445 aa19.45■□□□□ 0.7
ATPAF2-207ENST00000488753 ANKRD30BQ9BXX2 1392 aa19.44■□□□□ 0.7
ATPAF2-207ENST00000488753 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
ATPAF2-207ENST00000488753 ASXL1Q8IXJ9 1541 aa19.44■□□□□ 0.7
ATPAF2-207ENST00000488753 PPLO60437 1756 aa19.44■□□□□ 0.7
ATPAF2-207ENST00000488753 SETD1AO15047 1707 aaKnown RBP19.43■□□□□ 0.7
ATPAF2-207ENST00000488753 ROBO2Q9HCK4 1378 aa19.43■□□□□ 0.7
ATPAF2-207ENST00000488753 ADGRF5Q8IZF2 1346 aa19.4■□□□□ 0.7
ATPAF2-207ENST00000488753 RGL3Q3MIN7 710 aa19.39■□□□□ 0.69
ATPAF2-207ENST00000488753 POTEAQ6S8J7 498 aa19.39■□□□□ 0.69
ATPAF2-207ENST00000488753 NALCNQ8IZF0 1738 aa19.39■□□□□ 0.69
ATPAF2-207ENST00000488753 SHPRHQ149N8 1683 aa19.38■□□□□ 0.69
ATPAF2-207ENST00000488753 C1orf167Q5SNV9 1468 aa19.37■□□□□ 0.69
ATPAF2-207ENST00000488753 LRP6O75581 1613 aa19.36■□□□□ 0.69
ATPAF2-207ENST00000488753 RAB3GAP2Q9H2M9 1393 aa19.36■□□□□ 0.69
ATPAF2-207ENST00000488753 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
ATPAF2-207ENST00000488753 TECPR2O15040 1411 aa19.35■□□□□ 0.69
ATPAF2-207ENST00000488753 PIK3C2GO75747 1445 aa19.35■□□□□ 0.69
ATPAF2-207ENST00000488753 NHSL1Q5SYE7 1610 aa19.35■□□□□ 0.69
ATPAF2-207ENST00000488753 MEX3CQ5U5Q3 659 aaKnown RBP19.34■□□□□ 0.69
ATPAF2-207ENST00000488753 LRPPRCP42704 1394 aaKnown RBP19.33■□□□□ 0.69
ATPAF2-207ENST00000488753 ABCC11Q96J66 1382 aa19.33■□□□□ 0.69
ATPAF2-207ENST00000488753 IFT172Q9UG01 1749 aa19.32■□□□□ 0.68
ATPAF2-207ENST00000488753 ZNF772Q68DY9 489 aaPredicted RBP19.32■□□□□ 0.68
ATPAF2-207ENST00000488753 LAMC1P11047 1609 aa19.3■□□□□ 0.68
ATPAF2-207ENST00000488753 HRCP23327 699 aa19.3■□□□□ 0.68
ATPAF2-207ENST00000488753 CDC42BPGQ6DT37 1551 aa19.3■□□□□ 0.68
ATPAF2-207ENST00000488753 MYOM2P54296 1465 aa19.29■□□□□ 0.68
ATPAF2-207ENST00000488753 DDX17Q92841 729 aaKnown RBP19.29■□□□□ 0.68
ATPAF2-207ENST00000488753 ORAI2Q96SN7 254 aa19.29■□□□□ 0.68
ATPAF2-207ENST00000488753 PNPLA6Q8IY17 1366 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms