RNA–Protein interactions for RNA: ENST00000488600.1

LPGAT1-203, Transcript of lysophosphatidylglycerol acyltransferase 1, humanhuman

TSL 3

Gene LPGAT1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPGAT1-203ENST00000488600 TET3O43151 1660 aa30.64■■■□□ 2.5
LPGAT1-203ENST00000488600 UNC13BO14795 1591 aa30.62■■■□□ 2.49
LPGAT1-203ENST00000488600 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.61■■■□□ 2.49
LPGAT1-203ENST00000488600 TMEM94Q12767 1356 aa30.61■■■□□ 2.49
LPGAT1-203ENST00000488600 RIMS2Q9UQ26 1411 aa30.6■■■□□ 2.49
LPGAT1-203ENST00000488600 RBM33Q96EV2 1170 aaKnown RBP30.58■■■□□ 2.49
LPGAT1-203ENST00000488600 ZFYVE9O95405 1425 aa30.57■■■□□ 2.48
LPGAT1-203ENST00000488600 PLEKHG1Q9ULL1 1385 aa30.57■■■□□ 2.48
LPGAT1-203ENST00000488600 GCC2Q8IWJ2 1684 aa30.53■■■□□ 2.48
LPGAT1-203ENST00000488600 NUTM2DQ5VT03 806 aaPredicted RBP30.53■■■□□ 2.48
LPGAT1-203ENST00000488600 TBX22Q9Y458 520 aa30.53■■■□□ 2.48
LPGAT1-203ENST00000488600 IQGAP3Q86VI3 1631 aa30.51■■■□□ 2.47
LPGAT1-203ENST00000488600 PHF23Q9BUL5 403 aaPredicted RBP30.5■■■□□ 2.47
LPGAT1-203ENST00000488600 TMEM131LA2VDJ0 1609 aa30.5■■■□□ 2.47
LPGAT1-203ENST00000488600 MED1Q15648 1581 aaPredicted RBP30.49■■■□□ 2.47
LPGAT1-203ENST00000488600 E9PCH4 1651 aa30.49■■■□□ 2.47
LPGAT1-203ENST00000488600 FAM135BQ49AJ0 1406 aa30.48■■■□□ 2.47
LPGAT1-203ENST00000488600 NKTRP30414 1462 aaKnown RBP30.46■■■□□ 2.47
LPGAT1-203ENST00000488600 RRBP1Q9P2E9 1410 aaKnown RBP30.46■■■□□ 2.47
LPGAT1-203ENST00000488600 MSH6P52701 1360 aa30.44■■■□□ 2.46
LPGAT1-203ENST00000488600 XIRP1Q702N8 1843 aaKnown RBP30.43■■■□□ 2.46
LPGAT1-203ENST00000488600 NWD1Q149M9 1564 aa30.41■■■□□ 2.46
LPGAT1-203ENST00000488600 ZNF326Q5BKZ1 582 aaKnown RBP30.4■■■□□ 2.46
LPGAT1-203ENST00000488600 SLAIN2Q9P270 581 aa30.4■■■□□ 2.46
LPGAT1-203ENST00000488600 C14orf37Q86TY3 774 aa30.39■■■□□ 2.46
LPGAT1-203ENST00000488600 MYO5BQ9ULV0 1848 aa30.38■■■□□ 2.45
LPGAT1-203ENST00000488600 ADAMTS13Q76LX8 1427 aa30.38■■■□□ 2.45
LPGAT1-203ENST00000488600 NAIPQ13075 1403 aa30.36■■■□□ 2.45
LPGAT1-203ENST00000488600 PIK3R4Q99570 1358 aa30.35■■■□□ 2.45
LPGAT1-203ENST00000488600 TRIM52Q96A61 297 aa30.34■■■□□ 2.45
LPGAT1-203ENST00000488600 AMOTL2Q9Y2J4 779 aa30.33■■■□□ 2.45
LPGAT1-203ENST00000488600 NCOA3Q9Y6Q9 1424 aa30.32■■■□□ 2.44
LPGAT1-203ENST00000488600 C19orf44Q9H6X5 657 aa30.29■■■□□ 2.44
LPGAT1-203ENST00000488600 CHD2O14647 1828 aaKnown RBP30.29■■■□□ 2.44
LPGAT1-203ENST00000488600 DIP2AQ14689 1571 aa30.28■■■□□ 2.44
LPGAT1-203ENST00000488600 ATF3P18847 181 aa30.27■■■□□ 2.44
LPGAT1-203ENST00000488600 CADPS2Q86UW7 1296 aa30.27■■■□□ 2.44
LPGAT1-203ENST00000488600 ROBO1Q9Y6N7 1651 aa30.25■■■□□ 2.43
LPGAT1-203ENST00000488600 HFM1A2PYH4 1435 aa30.23■■■□□ 2.43
LPGAT1-203ENST00000488600 TRPM2O94759 1503 aa30.23■■■□□ 2.43
LPGAT1-203ENST00000488600 SLC4A1APQ9BWU0 796 aaKnown RBP30.23■■■□□ 2.43
LPGAT1-203ENST00000488600 SPHKAPQ2M3C7 1700 aa30.22■■■□□ 2.43
LPGAT1-203ENST00000488600 PTPRUQ92729 1446 aa30.22■■■□□ 2.43
LPGAT1-203ENST00000488600 RGS17Q9UGC6 210 aaPredicted RBP30.2■■■□□ 2.43
LPGAT1-203ENST00000488600 METP08581 1390 aa30.16■■■□□ 2.42
LPGAT1-203ENST00000488600 VGFO15240 615 aaPredicted RBP30.15■■■□□ 2.42
LPGAT1-203ENST00000488600 JCADQ9P266 1359 aa30.15■■■□□ 2.42
LPGAT1-203ENST00000488600 SETBP1Q9Y6X0 1596 aa30.14■■■□□ 2.42
LPGAT1-203ENST00000488600 CLTCL1P53675 1640 aa30.13■■■□□ 2.41
LPGAT1-203ENST00000488600 RPGRIP1LQ68CZ1 1315 aa30.09■■■□□ 2.41
LPGAT1-203ENST00000488600 NRXN3Q9Y4C0 1643 aa30.08■■■□□ 2.41
LPGAT1-203ENST00000488600 NEXMIFQ5QGS0 1516 aa30.08■■■□□ 2.41
LPGAT1-203ENST00000488600 FOXD1Q16676 465 aa30.07■■■□□ 2.4
LPGAT1-203ENST00000488600 BRINP3Q76B58 766 aa30.07■■■□□ 2.4
LPGAT1-203ENST00000488600 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.07■■■□□ 2.4
LPGAT1-203ENST00000488600 PHLPP1O60346 1717 aa30.06■■■□□ 2.4
LPGAT1-203ENST00000488600 POTEAQ6S8J7 498 aa30.05■■■□□ 2.4
LPGAT1-203ENST00000488600 DCCP43146 1447 aa30.05■■■□□ 2.4
LPGAT1-203ENST00000488600 SPATA31A6Q5VVP1 1343 aa30■■■□□ 2.39
LPGAT1-203ENST00000488600 XRN1Q8IZH2 1706 aaKnown RBP30■■■□□ 2.39
LPGAT1-203ENST00000488600 MPHOSPH9Q99550 1183 aa30■■■□□ 2.39
LPGAT1-203ENST00000488600 KIF1BO60333 1816 aa29.99■■■□□ 2.39
LPGAT1-203ENST00000488600 MEX3CQ5U5Q3 659 aaKnown RBP29.98■■■□□ 2.39
LPGAT1-203ENST00000488600 COL16A1Q07092 1604 aaPredicted RBP29.96■■■□□ 2.39
LPGAT1-203ENST00000488600 MST1RQ04912 1400 aa29.96■■■□□ 2.39
LPGAT1-203ENST00000488600 ADGRL3Q9HAR2 1447 aa29.96■■■□□ 2.39
LPGAT1-203ENST00000488600 RGL3Q3MIN7 710 aa29.95■■■□□ 2.39
LPGAT1-203ENST00000488600 AHDC1Q5TGY3 1603 aaPredicted RBP29.95■■■□□ 2.38
LPGAT1-203ENST00000488600 CCDC144AA2RUR9 1427 aa29.93■■■□□ 2.38
LPGAT1-203ENST00000488600 ACIN1Q9UKV3 1341 aaKnown RBP29.91■■■□□ 2.38
LPGAT1-203ENST00000488600 ROBO2Q9HCK4 1378 aa29.9■■■□□ 2.38
LPGAT1-203ENST00000488600 LRRC59Q96AG4 307 aaKnown RBP29.9■■■□□ 2.38
LPGAT1-203ENST00000488600 NUTM2BA6NNL0 878 aaPredicted RBP29.89■■■□□ 2.38
LPGAT1-203ENST00000488600 NUTM2EB1AL46 878 aaPredicted RBP29.89■■■□□ 2.38
LPGAT1-203ENST00000488600 NUTM2AQ8IVF1 878 aaPredicted RBP29.89■■■□□ 2.38
LPGAT1-203ENST00000488600 ASXL1Q8IXJ9 1541 aa29.89■■■□□ 2.38
LPGAT1-203ENST00000488600 PTCH1Q13635 1447 aa29.88■■■□□ 2.37
LPGAT1-203ENST00000488600 DDX17Q92841 729 aaKnown RBP29.87■■■□□ 2.37
LPGAT1-203ENST00000488600 ADGRF5Q8IZF2 1346 aa29.87■■■□□ 2.37
LPGAT1-203ENST00000488600 ZNF772Q68DY9 489 aaPredicted RBP29.86■■■□□ 2.37
LPGAT1-203ENST00000488600 LRP6O75581 1613 aa29.85■■■□□ 2.37
LPGAT1-203ENST00000488600 SETD5Q9C0A6 1442 aa29.85■■■□□ 2.37
LPGAT1-203ENST00000488600 ANKRD30BQ9BXX2 1392 aa29.83■■■□□ 2.37
LPGAT1-203ENST00000488600 C1orf167Q5SNV9 1468 aa29.82■■■□□ 2.36
LPGAT1-203ENST00000488600 SPATA31E1Q6ZUB1 1445 aa29.81■■■□□ 2.36
LPGAT1-203ENST00000488600 STK26Q9P289 416 aa29.81■■■□□ 2.36
LPGAT1-203ENST00000488600 ORAI2Q96SN7 254 aa29.8■■■□□ 2.36
LPGAT1-203ENST00000488600 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
LPGAT1-203ENST00000488600 SHPRHQ149N8 1683 aa29.77■■■□□ 2.36
LPGAT1-203ENST00000488600 PPLO60437 1756 aa29.77■■■□□ 2.36
LPGAT1-203ENST00000488600 NALCNQ8IZF0 1738 aa29.76■■■□□ 2.36
LPGAT1-203ENST00000488600 SETD1AO15047 1707 aaKnown RBP29.75■■■□□ 2.35
LPGAT1-203ENST00000488600 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
LPGAT1-203ENST00000488600 WAPLQ7Z5K2 1190 aa29.73■■■□□ 2.35
LPGAT1-203ENST00000488600 PNPLA6Q8IY17 1366 aa29.73■■■□□ 2.35
LPGAT1-203ENST00000488600 NHSL1Q5SYE7 1610 aa29.71■■■□□ 2.35
LPGAT1-203ENST00000488600 RXRBP28702 533 aa29.71■■■□□ 2.35
LPGAT1-203ENST00000488600 ESCO1Q5FWF5 840 aa29.71■■■□□ 2.35
LPGAT1-203ENST00000488600 LRPPRCP42704 1394 aaKnown RBP29.71■■■□□ 2.35
LPGAT1-203ENST00000488600 AFF2P51816 1311 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms