RNA–Protein interactions for RNA: ENST00000488407.1

FGD3-206, Transcript of FYVE, RhoGEF and PH domain containing 3, humanhuman

TSL 5

Gene FGD3, Length 462 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD3-206ENST00000488407 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
FGD3-206ENST00000488407 HDGFP51858 240 aaKnown RBP17.39■□□□□ 0.37
FGD3-206ENST00000488407 E9PCH4 1651 aa17.39■□□□□ 0.37
FGD3-206ENST00000488407 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
FGD3-206ENST00000488407 TMEM94Q12767 1356 aa17.38■□□□□ 0.37
FGD3-206ENST00000488407 RIMS2Q9UQ26 1411 aa17.36■□□□□ 0.37
FGD3-206ENST00000488407 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
FGD3-206ENST00000488407 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.35■□□□□ 0.37
FGD3-206ENST00000488407 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
FGD3-206ENST00000488407 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
FGD3-206ENST00000488407 NCOA3Q9Y6Q9 1424 aa17.33■□□□□ 0.36
FGD3-206ENST00000488407 CHD2O14647 1828 aaKnown RBP17.33■□□□□ 0.36
FGD3-206ENST00000488407 NUP155O75694 1391 aa17.32■□□□□ 0.36
FGD3-206ENST00000488407 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
FGD3-206ENST00000488407 PIK3R4Q99570 1358 aa17.31■□□□□ 0.36
FGD3-206ENST00000488407 PROSER2Q86WR7 435 aaPredicted RBP17.31■□□□□ 0.36
FGD3-206ENST00000488407 RRBP1Q9P2E9 1410 aaKnown RBP17.3■□□□□ 0.36
FGD3-206ENST00000488407 PPP1R15AO75807 674 aaPredicted RBP17.29■□□□□ 0.36
FGD3-206ENST00000488407 ADAMTS13Q76LX8 1427 aa17.29■□□□□ 0.36
FGD3-206ENST00000488407 MSH6P52701 1360 aa17.28■□□□□ 0.36
FGD3-206ENST00000488407 ROBO1Q9Y6N7 1651 aa17.27■□□□□ 0.36
FGD3-206ENST00000488407 BCANQ96GW7 911 aa17.27■□□□□ 0.36
FGD3-206ENST00000488407 PHF23Q9BUL5 403 aaPredicted RBP17.26■□□□□ 0.35
FGD3-206ENST00000488407 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
FGD3-206ENST00000488407 TRPM2O94759 1503 aa17.24■□□□□ 0.35
FGD3-206ENST00000488407 SETBP1Q9Y6X0 1596 aa17.23■□□□□ 0.35
FGD3-206ENST00000488407 CHGAP10645 457 aaKnown RBP17.22■□□□□ 0.35
FGD3-206ENST00000488407 ITGAEP38570 1179 aa17.22■□□□□ 0.35
FGD3-206ENST00000488407 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
FGD3-206ENST00000488407 NAIPQ13075 1403 aa17.21■□□□□ 0.34
FGD3-206ENST00000488407 NRXN3Q9Y4C0 1643 aa17.19■□□□□ 0.34
FGD3-206ENST00000488407 RBM33Q96EV2 1170 aaKnown RBP17.19■□□□□ 0.34
FGD3-206ENST00000488407 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
FGD3-206ENST00000488407 DCCP43146 1447 aa17.18■□□□□ 0.34
FGD3-206ENST00000488407 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
FGD3-206ENST00000488407 HFM1A2PYH4 1435 aa17.17■□□□□ 0.34
FGD3-206ENST00000488407 PHLPP1O60346 1717 aa17.17■□□□□ 0.34
FGD3-206ENST00000488407 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
FGD3-206ENST00000488407 SENP3Q9H4L4 574 aaPredicted RBP17.17■□□□□ 0.34
FGD3-206ENST00000488407 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.16■□□□□ 0.34
FGD3-206ENST00000488407 RGS17Q9UGC6 210 aaPredicted RBP17.16■□□□□ 0.34
FGD3-206ENST00000488407 JCADQ9P266 1359 aa17.15■□□□□ 0.34
FGD3-206ENST00000488407 PTPRUQ92729 1446 aa17.15■□□□□ 0.34
FGD3-206ENST00000488407 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
FGD3-206ENST00000488407 COL16A1Q07092 1604 aaPredicted RBP17.15■□□□□ 0.34
FGD3-206ENST00000488407 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
FGD3-206ENST00000488407 NUTM2DQ5VT03 806 aaPredicted RBP17.15■□□□□ 0.34
FGD3-206ENST00000488407 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
FGD3-206ENST00000488407 AMOTL2Q9Y2J4 779 aa17.14■□□□□ 0.33
FGD3-206ENST00000488407 NEXMIFQ5QGS0 1516 aa17.14■□□□□ 0.33
FGD3-206ENST00000488407 ATF3P18847 181 aa17.12■□□□□ 0.33
FGD3-206ENST00000488407 KIF1BO60333 1816 aa17.12■□□□□ 0.33
FGD3-206ENST00000488407 C14orf37Q86TY3 774 aa17.11■□□□□ 0.33
FGD3-206ENST00000488407 ZNF326Q5BKZ1 582 aaKnown RBP17.1■□□□□ 0.33
FGD3-206ENST00000488407 SPATA31A6Q5VVP1 1343 aa17.09■□□□□ 0.33
FGD3-206ENST00000488407 METP08581 1390 aa17.09■□□□□ 0.33
FGD3-206ENST00000488407 PRAG1Q86YV5 1406 aa17.09■□□□□ 0.33
FGD3-206ENST00000488407 SHPRHQ149N8 1683 aa17.08■□□□□ 0.32
FGD3-206ENST00000488407 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
FGD3-206ENST00000488407 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
FGD3-206ENST00000488407 MST1RQ04912 1400 aa17.05■□□□□ 0.32
FGD3-206ENST00000488407 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
FGD3-206ENST00000488407 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
FGD3-206ENST00000488407 BRINP3Q76B58 766 aa17.05■□□□□ 0.32
FGD3-206ENST00000488407 ASXL1Q8IXJ9 1541 aa17.05■□□□□ 0.32
FGD3-206ENST00000488407 SETD1AO15047 1707 aaKnown RBP17.04■□□□□ 0.32
FGD3-206ENST00000488407 POTEAQ6S8J7 498 aa17.03■□□□□ 0.32
FGD3-206ENST00000488407 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
FGD3-206ENST00000488407 NHSL1Q5SYE7 1610 aa17.03■□□□□ 0.32
FGD3-206ENST00000488407 TRIM52Q96A61 297 aa17.02■□□□□ 0.32
FGD3-206ENST00000488407 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
FGD3-206ENST00000488407 ACIN1Q9UKV3 1341 aaKnown RBP17.01■□□□□ 0.31
FGD3-206ENST00000488407 LRP6O75581 1613 aa17.01■□□□□ 0.31
FGD3-206ENST00000488407 PPLO60437 1756 aa17.01■□□□□ 0.31
FGD3-206ENST00000488407 NALCNQ8IZF0 1738 aa17.01■□□□□ 0.31
FGD3-206ENST00000488407 LAMC1P11047 1609 aa16.99■□□□□ 0.31
FGD3-206ENST00000488407 ZNF772Q68DY9 489 aaPredicted RBP16.97■□□□□ 0.31
FGD3-206ENST00000488407 CCDC144AA2RUR9 1427 aa16.96■□□□□ 0.3
FGD3-206ENST00000488407 C1orf167Q5SNV9 1468 aa16.95■□□□□ 0.3
FGD3-206ENST00000488407 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
FGD3-206ENST00000488407 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
FGD3-206ENST00000488407 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
FGD3-206ENST00000488407 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
FGD3-206ENST00000488407 MEX3CQ5U5Q3 659 aaKnown RBP16.93■□□□□ 0.3
FGD3-206ENST00000488407 TECPR2O15040 1411 aa16.92■□□□□ 0.3
FGD3-206ENST00000488407 IFT172Q9UG01 1749 aa16.92■□□□□ 0.3
FGD3-206ENST00000488407 CDC42BPGQ6DT37 1551 aa16.91■□□□□ 0.3
FGD3-206ENST00000488407 CDK12Q9NYV4 1490 aaPredicted RBP16.91■□□□□ 0.3
FGD3-206ENST00000488407 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
FGD3-206ENST00000488407 MPHOSPH9Q99550 1183 aa16.9■□□□□ 0.3
FGD3-206ENST00000488407 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
FGD3-206ENST00000488407 PIK3C2GO75747 1445 aa16.87■□□□□ 0.29
FGD3-206ENST00000488407 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
FGD3-206ENST00000488407 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
FGD3-206ENST00000488407 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
FGD3-206ENST00000488407 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
FGD3-206ENST00000488407 FOXD1Q16676 465 aa16.86■□□□□ 0.29
FGD3-206ENST00000488407 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
FGD3-206ENST00000488407 NUTM2BA6NNL0 878 aaPredicted RBP16.84■□□□□ 0.29
FGD3-206ENST00000488407 NUTM2EB1AL46 878 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms