RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 MYO5BQ9ULV0 1848 aa17.22■□□□□ 0.35
PCYT1A-215ENST00000488235 RBM33Q96EV2 1170 aaKnown RBP17.22■□□□□ 0.35
PCYT1A-215ENST00000488235 NUP155O75694 1391 aa17.21■□□□□ 0.35
PCYT1A-215ENST00000488235 RIMS2Q9UQ26 1411 aa17.2■□□□□ 0.34
PCYT1A-215ENST00000488235 RRBP1Q9P2E9 1410 aaKnown RBP17.19■□□□□ 0.34
PCYT1A-215ENST00000488235 TMEM94Q12767 1356 aa17.18■□□□□ 0.34
PCYT1A-215ENST00000488235 KCNA6P17658 529 aa17.18■□□□□ 0.34
PCYT1A-215ENST00000488235 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
PCYT1A-215ENST00000488235 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
PCYT1A-215ENST00000488235 PLEKHG1Q9ULL1 1385 aa17.16■□□□□ 0.34
PCYT1A-215ENST00000488235 MED1Q15648 1581 aaPredicted RBP17.16■□□□□ 0.34
PCYT1A-215ENST00000488235 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
PCYT1A-215ENST00000488235 BCANQ96GW7 911 aa17.15■□□□□ 0.34
PCYT1A-215ENST00000488235 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
PCYT1A-215ENST00000488235 NAIPQ13075 1403 aa17.13■□□□□ 0.33
PCYT1A-215ENST00000488235 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
PCYT1A-215ENST00000488235 SOCS7O14512 581 aa17.12■□□□□ 0.33
PCYT1A-215ENST00000488235 PPP1R15AO75807 674 aaPredicted RBP17.12■□□□□ 0.33
PCYT1A-215ENST00000488235 NKTRP30414 1462 aaKnown RBP17.12■□□□□ 0.33
PCYT1A-215ENST00000488235 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.33
PCYT1A-215ENST00000488235 TBX22Q9Y458 520 aa17.08■□□□□ 0.32
PCYT1A-215ENST00000488235 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
PCYT1A-215ENST00000488235 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
PCYT1A-215ENST00000488235 SPHKAPQ2M3C7 1700 aa17.07■□□□□ 0.32
PCYT1A-215ENST00000488235 HDGFP51858 240 aaKnown RBP17.06■□□□□ 0.32
PCYT1A-215ENST00000488235 PTPRUQ92729 1446 aa17.05■□□□□ 0.32
PCYT1A-215ENST00000488235 ROBO1Q9Y6N7 1651 aa17.04■□□□□ 0.32
PCYT1A-215ENST00000488235 CLTCL1P53675 1640 aa17.04■□□□□ 0.32
PCYT1A-215ENST00000488235 NRXN3Q9Y4C0 1643 aa17.03■□□□□ 0.32
PCYT1A-215ENST00000488235 HFM1A2PYH4 1435 aa17.03■□□□□ 0.32
PCYT1A-215ENST00000488235 MSH6P52701 1360 aa17.02■□□□□ 0.32
PCYT1A-215ENST00000488235 DIP2AQ14689 1571 aa17.02■□□□□ 0.31
PCYT1A-215ENST00000488235 TRPM2O94759 1503 aa17.01■□□□□ 0.31
PCYT1A-215ENST00000488235 SLAIN2Q9P270 581 aa17■□□□□ 0.31
PCYT1A-215ENST00000488235 SETBP1Q9Y6X0 1596 aa16.99■□□□□ 0.31
PCYT1A-215ENST00000488235 ZNF326Q5BKZ1 582 aaKnown RBP16.99■□□□□ 0.31
PCYT1A-215ENST00000488235 RGS17Q9UGC6 210 aaPredicted RBP16.99■□□□□ 0.31
PCYT1A-215ENST00000488235 AMOTL2Q9Y2J4 779 aa16.99■□□□□ 0.31
PCYT1A-215ENST00000488235 METP08581 1390 aa16.99■□□□□ 0.31
PCYT1A-215ENST00000488235 PIK3R4Q99570 1358 aa16.99■□□□□ 0.31
PCYT1A-215ENST00000488235 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
PCYT1A-215ENST00000488235 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
PCYT1A-215ENST00000488235 PHF23Q9BUL5 403 aaPredicted RBP16.97■□□□□ 0.31
PCYT1A-215ENST00000488235 NCOA3Q9Y6Q9 1424 aa16.96■□□□□ 0.31
PCYT1A-215ENST00000488235 FOXD1Q16676 465 aa16.95■□□□□ 0.3
PCYT1A-215ENST00000488235 C14orf37Q86TY3 774 aa16.95■□□□□ 0.3
PCYT1A-215ENST00000488235 XRN1Q8IZH2 1706 aaKnown RBP16.95■□□□□ 0.3
PCYT1A-215ENST00000488235 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.95■□□□□ 0.3
PCYT1A-215ENST00000488235 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
PCYT1A-215ENST00000488235 C19orf44Q9H6X5 657 aa16.93■□□□□ 0.3
PCYT1A-215ENST00000488235 PHLPP1O60346 1717 aa16.91■□□□□ 0.3
PCYT1A-215ENST00000488235 COL16A1Q07092 1604 aaPredicted RBP16.91■□□□□ 0.3
PCYT1A-215ENST00000488235 CADPS2Q86UW7 1296 aa16.9■□□□□ 0.3
PCYT1A-215ENST00000488235 KIF1BO60333 1816 aa16.89■□□□□ 0.29
PCYT1A-215ENST00000488235 ATF3P18847 181 aa16.89■□□□□ 0.29
PCYT1A-215ENST00000488235 BRINP3Q76B58 766 aa16.88■□□□□ 0.29
PCYT1A-215ENST00000488235 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
PCYT1A-215ENST00000488235 POTEAQ6S8J7 498 aa16.87■□□□□ 0.29
PCYT1A-215ENST00000488235 JCADQ9P266 1359 aa16.86■□□□□ 0.29
PCYT1A-215ENST00000488235 MST1RQ04912 1400 aa16.86■□□□□ 0.29
PCYT1A-215ENST00000488235 AHDC1Q5TGY3 1603 aaPredicted RBP16.85■□□□□ 0.29
PCYT1A-215ENST00000488235 ROBO2Q9HCK4 1378 aa16.85■□□□□ 0.29
PCYT1A-215ENST00000488235 DCCP43146 1447 aa16.85■□□□□ 0.29
PCYT1A-215ENST00000488235 LRP6O75581 1613 aa16.85■□□□□ 0.29
PCYT1A-215ENST00000488235 MPHOSPH9Q99550 1183 aa16.84■□□□□ 0.29
PCYT1A-215ENST00000488235 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
PCYT1A-215ENST00000488235 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
PCYT1A-215ENST00000488235 VGFO15240 615 aaPredicted RBP16.83■□□□□ 0.28
PCYT1A-215ENST00000488235 ASXL1Q8IXJ9 1541 aa16.83■□□□□ 0.28
PCYT1A-215ENST00000488235 PPLO60437 1756 aa16.82■□□□□ 0.28
PCYT1A-215ENST00000488235 SPATA31E1Q6ZUB1 1445 aa16.82■□□□□ 0.28
PCYT1A-215ENST00000488235 ADGRF5Q8IZF2 1346 aa16.82■□□□□ 0.28
PCYT1A-215ENST00000488235 DDX17Q92841 729 aaKnown RBP16.82■□□□□ 0.28
PCYT1A-215ENST00000488235 RPGRIP1LQ68CZ1 1315 aa16.81■□□□□ 0.28
PCYT1A-215ENST00000488235 PTCH1Q13635 1447 aa16.8■□□□□ 0.28
PCYT1A-215ENST00000488235 RGL3Q3MIN7 710 aa16.8■□□□□ 0.28
PCYT1A-215ENST00000488235 CCDC144AA2RUR9 1427 aa16.79■□□□□ 0.28
PCYT1A-215ENST00000488235 PRAG1Q86YV5 1406 aa16.79■□□□□ 0.28
PCYT1A-215ENST00000488235 SHPRHQ149N8 1683 aa16.77■□□□□ 0.28
PCYT1A-215ENST00000488235 SETD5Q9C0A6 1442 aa16.77■□□□□ 0.27
PCYT1A-215ENST00000488235 NHSL1Q5SYE7 1610 aa16.77■□□□□ 0.27
PCYT1A-215ENST00000488235 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
PCYT1A-215ENST00000488235 C1orf167Q5SNV9 1468 aa16.76■□□□□ 0.27
PCYT1A-215ENST00000488235 IFT172Q9UG01 1749 aa16.74■□□□□ 0.27
PCYT1A-215ENST00000488235 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
PCYT1A-215ENST00000488235 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
PCYT1A-215ENST00000488235 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
PCYT1A-215ENST00000488235 PIK3C2GO75747 1445 aa16.72■□□□□ 0.27
PCYT1A-215ENST00000488235 NUTM2BA6NNL0 878 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-215ENST00000488235 NUTM2EB1AL46 878 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-215ENST00000488235 NUTM2AQ8IVF1 878 aaPredicted RBP16.72■□□□□ 0.27
PCYT1A-215ENST00000488235 STK26Q9P289 416 aa16.72■□□□□ 0.27
PCYT1A-215ENST00000488235 WAPLQ7Z5K2 1190 aa16.71■□□□□ 0.27
PCYT1A-215ENST00000488235 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
PCYT1A-215ENST00000488235 PNPLA6Q8IY17 1366 aa16.7■□□□□ 0.26
PCYT1A-215ENST00000488235 ANKRD30BQ9BXX2 1392 aa16.7■□□□□ 0.26
PCYT1A-215ENST00000488235 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
PCYT1A-215ENST00000488235 TECPR2O15040 1411 aa16.69■□□□□ 0.26
PCYT1A-215ENST00000488235 LRPPRCP42704 1394 aaKnown RBP16.68■□□□□ 0.26
PCYT1A-215ENST00000488235 LRRC59Q96AG4 307 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms