RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 C6orf132Q5T0Z8 1188 aa10.88□□□□□ -0.67
TNFSF4-203ENST00000488053 KCNH8Q96L42 1107 aa10.88□□□□□ -0.67
TNFSF4-203ENST00000488053 CARMIL2Q6F5E8 1435 aa10.87□□□□□ -0.67
TNFSF4-203ENST00000488053 PTPREP23469 700 aa10.87□□□□□ -0.67
TNFSF4-203ENST00000488053 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
TNFSF4-203ENST00000488053 TNIKQ9UKE5 1360 aa10.87□□□□□ -0.67
TNFSF4-203ENST00000488053 KDM6BO15054 1643 aa10.87□□□□□ -0.67
TNFSF4-203ENST00000488053 FCHSD2O94868 740 aa10.86□□□□□ -0.67
TNFSF4-203ENST00000488053 TSR1Q2NL82 804 aaKnown RBP10.86□□□□□ -0.67
TNFSF4-203ENST00000488053 CERKQ8TCT0 537 aa10.86□□□□□ -0.67
TNFSF4-203ENST00000488053 PBX2P40425 430 aa10.85□□□□□ -0.67
TNFSF4-203ENST00000488053 TPRNQ4KMQ1 711 aa10.85□□□□□ -0.67
TNFSF4-203ENST00000488053 ZNF687Q8N1G0 1237 aa10.85□□□□□ -0.67
TNFSF4-203ENST00000488053 ZC3H15Q8WU90 426 aaKnown RBP10.85□□□□□ -0.67
TNFSF4-203ENST00000488053 ABCC2Q92887 1545 aa10.84□□□□□ -0.67
TNFSF4-203ENST00000488053 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
TNFSF4-203ENST00000488053 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
TNFSF4-203ENST00000488053 PTGDRQ13258 359 aa10.83□□□□□ -0.68
TNFSF4-203ENST00000488053 HIC1Q14526 733 aa10.83□□□□□ -0.68
TNFSF4-203ENST00000488053 KCNK17Q96T54 332 aa10.83□□□□□ -0.68
TNFSF4-203ENST00000488053 DISP1Q96F81 1524 aa10.83□□□□□ -0.68
TNFSF4-203ENST00000488053 ASXL2Q76L83 1435 aa10.83□□□□□ -0.68
TNFSF4-203ENST00000488053 PPP1R3GB7ZBB8 358 aa10.82□□□□□ -0.68
TNFSF4-203ENST00000488053 GPR37O15354 613 aa10.82□□□□□ -0.68
TNFSF4-203ENST00000488053 ARHGAP33O14559 1287 aa10.81□□□□□ -0.68
TNFSF4-203ENST00000488053 NPDC1Q9NQX5 325 aaPredicted RBP10.81□□□□□ -0.68
TNFSF4-203ENST00000488053 PPRC1Q5VV67 1664 aaKnown RBP10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 POTEB3A0JP26 581 aa10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 POTEBQ6S5H4 581 aa10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 UACAQ9BZF9 1416 aa10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 UHRF1BP1LA0JNW5 1464 aa10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 PLB1Q6P1J6 1458 aa10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 KIAA0556O60303 1618 aa10.8□□□□□ -0.68
TNFSF4-203ENST00000488053 UGGT2Q9NYU1 1516 aa10.79□□□□□ -0.68
TNFSF4-203ENST00000488053 GNPATO15228 680 aa10.79□□□□□ -0.68
TNFSF4-203ENST00000488053 ZMYND10O75800 440 aa10.79□□□□□ -0.68
TNFSF4-203ENST00000488053 CTTNBP2Q8WZ74 1663 aa10.79□□□□□ -0.68
TNFSF4-203ENST00000488053 ZCCHC11Q5TAX3 1644 aaKnown RBP10.78□□□□□ -0.68
TNFSF4-203ENST00000488053 COL9A1P20849 921 aa10.78□□□□□ -0.68
TNFSF4-203ENST00000488053 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
TNFSF4-203ENST00000488053 GLI2P10070 1586 aa10.77□□□□□ -0.68
TNFSF4-203ENST00000488053 BARGINQ6ZT62 677 aa10.77□□□□□ -0.69
TNFSF4-203ENST00000488053 PSEN2P49810 448 aa10.76□□□□□ -0.69
TNFSF4-203ENST00000488053 POTEGQ6S5H5 508 aa10.76□□□□□ -0.69
TNFSF4-203ENST00000488053 EPRSP07814 1512 aaKnown RBP10.75□□□□□ -0.69
TNFSF4-203ENST00000488053 KDM5BQ9UGL1 1544 aa10.75□□□□□ -0.69
TNFSF4-203ENST00000488053 PRSS12P56730 875 aa10.75□□□□□ -0.69
TNFSF4-203ENST00000488053 POTEEQ6S8J3 1075 aa10.75□□□□□ -0.69
TNFSF4-203ENST00000488053 AXIN2Q9Y2T1 843 aa10.75□□□□□ -0.69
TNFSF4-203ENST00000488053 MAP3K4Q9Y6R4 1608 aa10.74□□□□□ -0.69
TNFSF4-203ENST00000488053 POTEMA6NI47 508 aa10.74□□□□□ -0.69
TNFSF4-203ENST00000488053 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
TNFSF4-203ENST00000488053 PRKCSHP14314 528 aaPredicted RBP10.73□□□□□ -0.69
TNFSF4-203ENST00000488053 SLC4A5Q9BY07 1137 aa10.73□□□□□ -0.69
TNFSF4-203ENST00000488053 MAP2K5Q13163 448 aa10.72□□□□□ -0.69
TNFSF4-203ENST00000488053 PADI6Q6TGC4 694 aa10.72□□□□□ -0.69
TNFSF4-203ENST00000488053 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
TNFSF4-203ENST00000488053 ZBED2Q9BTP6 218 aa10.72□□□□□ -0.69
TNFSF4-203ENST00000488053 COL17A1Q9UMD9 1497 aaPredicted RBP10.72□□□□□ -0.69
TNFSF4-203ENST00000488053 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
TNFSF4-203ENST00000488053 DMRTA1Q5VZB9 504 aa10.71□□□□□ -0.69
TNFSF4-203ENST00000488053 MINK1Q8N4C8 1332 aaPredicted RBP10.71□□□□□ -0.69
TNFSF4-203ENST00000488053 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
TNFSF4-203ENST00000488053 GOLGA3Q08378 1498 aa10.7□□□□□ -0.7
TNFSF4-203ENST00000488053 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
TNFSF4-203ENST00000488053 ARID3CA6NKF2 412 aa10.7□□□□□ -0.7
TNFSF4-203ENST00000488053 TRIM6-TRIM34B2RNG4 842 aa10.7□□□□□ -0.7
TNFSF4-203ENST00000488053 LSM11P83369 360 aaKnown RBP eCLIP10.7□□□□□ -0.7
TNFSF4-203ENST00000488053 TEX14Q8IWB6 1497 aa10.69□□□□□ -0.7
TNFSF4-203ENST00000488053 PRXQ9BXM0 1461 aa10.69□□□□□ -0.7
TNFSF4-203ENST00000488053 TK2O00142 265 aa10.69□□□□□ -0.7
TNFSF4-203ENST00000488053 FECHP22830 423 aa10.69□□□□□ -0.7
TNFSF4-203ENST00000488053 PACS2Q86VP3 889 aa10.69□□□□□ -0.7
TNFSF4-203ENST00000488053 ABCA8O94911 1581 aa10.69□□□□□ -0.7
TNFSF4-203ENST00000488053 ADGRL1O94910 1474 aa10.68□□□□□ -0.7
TNFSF4-203ENST00000488053 PROX2Q3B8N5 592 aa10.68□□□□□ -0.7
TNFSF4-203ENST00000488053 IRF6O14896 467 aa10.67□□□□□ -0.7
TNFSF4-203ENST00000488053 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
TNFSF4-203ENST00000488053 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
TNFSF4-203ENST00000488053 NBPF26B4DH59 902 aa10.66□□□□□ -0.7
TNFSF4-203ENST00000488053 CDAN1Q8IWY9 1227 aa10.66□□□□□ -0.7
TNFSF4-203ENST00000488053 OATP04181 439 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 AK7Q96M32 723 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 SLC24A3Q9HC58 644 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 RABGEF1Q9UJ41 708 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 CFAP43Q8NDM7 1665 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 CD109Q6YHK3 1445 aa10.65□□□□□ -0.7
TNFSF4-203ENST00000488053 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
TNFSF4-203ENST00000488053 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
TNFSF4-203ENST00000488053 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
TNFSF4-203ENST00000488053 FAM198AQ9UFP1 575 aa10.64□□□□□ -0.71
TNFSF4-203ENST00000488053 ADGRD1Q6QNK2 874 aa10.63□□□□□ -0.71
TNFSF4-203ENST00000488053 ANKRD13DQ6ZTN6 518 aa10.63□□□□□ -0.71
TNFSF4-203ENST00000488053 RBM46Q8TBY0 533 aaKnown RBP10.63□□□□□ -0.71
TNFSF4-203ENST00000488053 KRTAP3-3Q9BYR6 98 aa10.63□□□□□ -0.71
TNFSF4-203ENST00000488053 KRTAP3-2Q9BYR7 98 aa10.63□□□□□ -0.71
TNFSF4-203ENST00000488053 NBPF3Q9H094 633 aa10.62□□□□□ -0.71
TNFSF4-203ENST00000488053 TATDN2Q93075 761 aa10.61□□□□□ -0.71
TNFSF4-203ENST00000488053 MAGI3Q5TCQ9 1506 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms