RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 RBM46Q8TBY0 533 aaKnown RBP5.8□□□□□ -1.48
GPNMB-212ENST00000487890 KHSRPQ92945 711 aaKnown RBP eCLIP5.8□□□□□ -1.48
GPNMB-212ENST00000487890 CDCA7LQ96GN5 454 aa5.8□□□□□ -1.48
GPNMB-212ENST00000487890 RCCD1A6NED2 376 aa5.79□□□□□ -1.48
GPNMB-212ENST00000487890 RETREG2Q8NC44 543 aa5.79□□□□□ -1.48
GPNMB-212ENST00000487890 DCAF1Q9Y4B6 1507 aa5.79□□□□□ -1.48
GPNMB-212ENST00000487890 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.78□□□□□ -1.48
GPNMB-212ENST00000487890 MOXD2PA6NHM9 499 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 C3orf80F5H4A9 247 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 NUDT7P0C024 238 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 CD46P15529 392 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 QPCTQ16769 361 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 CSPP1Q1MSJ5 1256 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 TUSC1Q2TAM9 212 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 RSBN1LQ6PCB5 846 aaPredicted RBP5.78□□□□□ -1.48
GPNMB-212ENST00000487890 AEBP1Q8IUX7 1158 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 EYA1Q99502 592 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.78□□□□□ -1.48
GPNMB-212ENST00000487890 PCDHB15Q9Y5E8 787 aa5.78□□□□□ -1.48
GPNMB-212ENST00000487890 POM121CA8CG34 1229 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 POTEIP0CG38 1075 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 NDUFV2P19404 249 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 COL9A1P20849 921 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 ABL2P42684 1182 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 IRF5Q13568 498 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 RTL5Q5HYW3 569 aaPredicted RBP5.77□□□□□ -1.49
GPNMB-212ENST00000487890 KCTD17Q8N5Z5 321 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 TBC1D2BQ9UPU7 963 aa5.77□□□□□ -1.49
GPNMB-212ENST00000487890 DDX11L8A8MPP1 907 aa5.76□□□□□ -1.49
GPNMB-212ENST00000487890 LILRB3O75022 631 aa5.76□□□□□ -1.49
GPNMB-212ENST00000487890 AP1G2O75843 785 aa5.76□□□□□ -1.49
GPNMB-212ENST00000487890 ARSIQ5FYB1 569 aa5.76□□□□□ -1.49
GPNMB-212ENST00000487890 NUTM1Q86Y26 1132 aa5.76□□□□□ -1.49
GPNMB-212ENST00000487890 ZNF710Q8N1W2 664 aa5.75□□□□□ -1.49
GPNMB-212ENST00000487890 CALR3Q96L12 384 aaKnown RBP5.75□□□□□ -1.49
GPNMB-212ENST00000487890 TSKSQ9UJT2 592 aa5.75□□□□□ -1.49
GPNMB-212ENST00000487890 NUDT18Q6ZVK8 323 aa5.74□□□□□ -1.49
GPNMB-212ENST00000487890 PPP1R15AO75807 674 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-212ENST00000487890 HOXB3P14651 431 aaPredicted RBP5.73□□□□□ -1.49
GPNMB-212ENST00000487890 GJA5P36382 358 aa5.73□□□□□ -1.49
GPNMB-212ENST00000487890 SULF1Q8IWU6 871 aa5.73□□□□□ -1.49
GPNMB-212ENST00000487890 WWC1Q8IX03 1113 aa5.73□□□□□ -1.49
GPNMB-212ENST00000487890 CABLES1Q8TDN4 633 aa5.73□□□□□ -1.49
GPNMB-212ENST00000487890 GLMNQ92990 594 aa5.73□□□□□ -1.49
GPNMB-212ENST00000487890 NUTM2BA6NNL0 878 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-212ENST00000487890 NUTM2EB1AL46 878 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-212ENST00000487890 SOCS7O14512 581 aa5.72□□□□□ -1.49
GPNMB-212ENST00000487890 USP17L8P0C7I0 530 aa5.72□□□□□ -1.49
GPNMB-212ENST00000487890 DNAJB2P25686 324 aa5.72□□□□□ -1.49
GPNMB-212ENST00000487890 NUTM2DQ5VT03 806 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-212ENST00000487890 GPR153Q6NV75 609 aa5.72□□□□□ -1.49
GPNMB-212ENST00000487890 NUTM2AQ8IVF1 878 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-212ENST00000487890 TATDN2Q93075 761 aa5.72□□□□□ -1.49
GPNMB-212ENST00000487890 GZF1Q9H116 711 aaPredicted RBP5.72□□□□□ -1.49
GPNMB-212ENST00000487890 LHX6Q9UPM6 363 aa5.72□□□□□ -1.49
GPNMB-212ENST00000487890 ACIN1Q9UKV3 1341 aaKnown RBP5.72□□□□□ -1.49
GPNMB-212ENST00000487890 SHROOM4Q9ULL8 1493 aa5.71□□□□□ -1.49
GPNMB-212ENST00000487890 HDGFL1Q5TGJ6 251 aa5.71□□□□□ -1.5
GPNMB-212ENST00000487890 ADAMTS19Q8TE59 1207 aa5.71□□□□□ -1.5
GPNMB-212ENST00000487890 GJD4Q96KN9 370 aaPredicted RBP5.71□□□□□ -1.5
GPNMB-212ENST00000487890 TMEM134Q9H6X4 195 aa5.71□□□□□ -1.5
GPNMB-212ENST00000487890 PRM3Q9NNZ6 103 aa5.71□□□□□ -1.5
GPNMB-212ENST00000487890 PNMA3Q9UL41 463 aa5.71□□□□□ -1.5
GPNMB-212ENST00000487890 CC2D2AQ9P2K1 1620 aa5.7□□□□□ -1.5
GPNMB-212ENST00000487890 SMAPO00193 183 aa5.7□□□□□ -1.5
GPNMB-212ENST00000487890 BCL2L12Q9HB09 334 aa5.7□□□□□ -1.5
GPNMB-212ENST00000487890 PPP1R3GB7ZBB8 358 aa5.69□□□□□ -1.5
GPNMB-212ENST00000487890 KDM4AO75164 1064 aa5.69□□□□□ -1.5
GPNMB-212ENST00000487890 DOK7Q18PE1 504 aa5.69□□□□□ -1.5
GPNMB-212ENST00000487890 PRPF38BQ5VTL8 546 aaKnown RBP5.69□□□□□ -1.5
GPNMB-212ENST00000487890 RDH13Q8NBN7 331 aa5.69□□□□□ -1.5
GPNMB-212ENST00000487890 RGS22Q8NE09 1264 aa5.69□□□□□ -1.5
GPNMB-212ENST00000487890 PCDHGC3Q9UN70 934 aa5.69□□□□□ -1.5
GPNMB-212ENST00000487890 EIF4G1Q04637 1599 aaKnown RBP5.68□□□□□ -1.5
GPNMB-212ENST00000487890 TRIM6-TRIM34B2RNG4 842 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 NBPF26B4DH59 902 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 GPR37L1O60883 481 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 RFX1P22670 979 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 SRPK2P78362 688 aaKnown RBP5.68□□□□□ -1.5
GPNMB-212ENST00000487890 GUCA2AQ02747 115 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 CTDSPL2Q05D32 466 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 PPP4R3BQ5MIZ7 849 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 PACS2Q86VP3 889 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 HLA-CQ95604 372 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 TRIM34Q9BYJ4 488 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 HMX1Q9NP08 348 aaPredicted RBP5.68□□□□□ -1.5
GPNMB-212ENST00000487890 MTMR7Q9Y216 660 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 NDUFB9Q9Y6M9 179 aa5.68□□□□□ -1.5
GPNMB-212ENST00000487890 CECR2Q9BXF3 1484 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.67□□□□□ -1.5
GPNMB-212ENST00000487890 HOXA2O43364 376 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 POTEJP0CG39 1038 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 FDX1P10109 184 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 PTPREP23469 700 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 GCGRP47871 477 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 PROX2Q3B8N5 592 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 CFAP70Q5T0N1 1121 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 TMCO4Q5TGY1 634 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 PBXIP1Q96AQ6 731 aa5.67□□□□□ -1.5
GPNMB-212ENST00000487890 ZBTB3Q9H5J0 574 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms