RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ALKQ9UM73 1620 aa35.84■■■■□ 3.33
PLOD3-215ENST00000487563 PPP1R15AO75807 674 aaPredicted RBP35.84■■■■□ 3.33
PLOD3-215ENST00000487563 RIMS2Q9UQ26 1411 aa35.83■■■■□ 3.33
PLOD3-215ENST00000487563 HDGFP51858 240 aaKnown RBP35.82■■■■□ 3.32
PLOD3-215ENST00000487563 ZFYVE9O95405 1425 aa35.82■■■■□ 3.32
PLOD3-215ENST00000487563 SENP3Q9H4L4 574 aaPredicted RBP35.79■■■■□ 3.32
PLOD3-215ENST00000487563 KCNA6P17658 529 aa35.78■■■■□ 3.32
PLOD3-215ENST00000487563 PLEKHG1Q9ULL1 1385 aa35.76■■■■□ 3.32
PLOD3-215ENST00000487563 XIRP1Q702N8 1843 aaKnown RBP35.75■■■■□ 3.31
PLOD3-215ENST00000487563 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.74■■■■□ 3.31
PLOD3-215ENST00000487563 TMEM94Q12767 1356 aa35.72■■■■□ 3.31
PLOD3-215ENST00000487563 PROSER2Q86WR7 435 aaPredicted RBP35.71■■■■□ 3.31
PLOD3-215ENST00000487563 NWD1Q149M9 1564 aa35.71■■■■□ 3.31
PLOD3-215ENST00000487563 NKTRP30414 1462 aaKnown RBP35.7■■■■□ 3.31
PLOD3-215ENST00000487563 NAIPQ13075 1403 aa35.69■■■■□ 3.3
PLOD3-215ENST00000487563 ILDR2Q71H61 639 aa35.69■■■■□ 3.3
PLOD3-215ENST00000487563 SPHKAPQ2M3C7 1700 aa35.69■■■■□ 3.3
PLOD3-215ENST00000487563 NUTM2DQ5VT03 806 aaPredicted RBP35.66■■■■□ 3.3
PLOD3-215ENST00000487563 RBM33Q96EV2 1170 aaKnown RBP35.62■■■■□ 3.29
PLOD3-215ENST00000487563 MED1Q15648 1581 aaPredicted RBP35.6■■■■□ 3.29
PLOD3-215ENST00000487563 TBX22Q9Y458 520 aa35.6■■■■□ 3.29
PLOD3-215ENST00000487563 DIP2AQ14689 1571 aa35.59■■■■□ 3.29
PLOD3-215ENST00000487563 HFM1A2PYH4 1435 aa35.58■■■■□ 3.29
PLOD3-215ENST00000487563 CHD2O14647 1828 aaKnown RBP35.58■■■■□ 3.29
PLOD3-215ENST00000487563 TRIM52Q96A61 297 aa35.56■■■■□ 3.28
PLOD3-215ENST00000487563 MSH6P52701 1360 aa35.55■■■■□ 3.28
PLOD3-215ENST00000487563 ADAMTS13Q76LX8 1427 aa35.55■■■■□ 3.28
PLOD3-215ENST00000487563 ZNF326Q5BKZ1 582 aaKnown RBP35.54■■■■□ 3.28
PLOD3-215ENST00000487563 TRPM2O94759 1503 aa35.52■■■■□ 3.28
PLOD3-215ENST00000487563 CLTCL1P53675 1640 aa35.5■■■■□ 3.27
PLOD3-215ENST00000487563 FAM135BQ49AJ0 1406 aa35.5■■■■□ 3.27
PLOD3-215ENST00000487563 PIK3R4Q99570 1358 aa35.49■■■■□ 3.27
PLOD3-215ENST00000487563 C14orf37Q86TY3 774 aa35.46■■■■□ 3.27
PLOD3-215ENST00000487563 SOCS7O14512 581 aa35.45■■■■□ 3.27
PLOD3-215ENST00000487563 ROBO1Q9Y6N7 1651 aa35.45■■■■□ 3.27
PLOD3-215ENST00000487563 PHF23Q9BUL5 403 aaPredicted RBP35.43■■■■□ 3.26
PLOD3-215ENST00000487563 SLC4A1APQ9BWU0 796 aaKnown RBP35.43■■■■□ 3.26
PLOD3-215ENST00000487563 KIF1BO60333 1816 aa35.41■■■■□ 3.26
PLOD3-215ENST00000487563 SETBP1Q9Y6X0 1596 aa35.41■■■■□ 3.26
PLOD3-215ENST00000487563 NCOA3Q9Y6Q9 1424 aa35.4■■■■□ 3.26
PLOD3-215ENST00000487563 NRXN3Q9Y4C0 1643 aa35.39■■■■□ 3.26
PLOD3-215ENST00000487563 AMOTL2Q9Y2J4 779 aa35.38■■■■□ 3.25
PLOD3-215ENST00000487563 SLAIN2Q9P270 581 aa35.37■■■■□ 3.25
PLOD3-215ENST00000487563 NEXMIFQ5QGS0 1516 aa35.37■■■■□ 3.25
PLOD3-215ENST00000487563 PTPRUQ92729 1446 aa35.34■■■■□ 3.25
PLOD3-215ENST00000487563 ATF3P18847 181 aa35.29■■■■□ 3.24
PLOD3-215ENST00000487563 C19orf44Q9H6X5 657 aa35.29■■■■□ 3.24
PLOD3-215ENST00000487563 XRN1Q8IZH2 1706 aaKnown RBP35.29■■■■□ 3.24
PLOD3-215ENST00000487563 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.29■■■■□ 3.24
PLOD3-215ENST00000487563 CADPS2Q86UW7 1296 aa35.28■■■■□ 3.24
PLOD3-215ENST00000487563 METP08581 1390 aa35.25■■■■□ 3.23
PLOD3-215ENST00000487563 PHLPP1O60346 1717 aa35.25■■■■□ 3.23
PLOD3-215ENST00000487563 VGFO15240 615 aaPredicted RBP35.22■■■■□ 3.23
PLOD3-215ENST00000487563 FOXD1Q16676 465 aa35.22■■■■□ 3.23
PLOD3-215ENST00000487563 RPGRIP1LQ68CZ1 1315 aa35.2■■■■□ 3.23
PLOD3-215ENST00000487563 DCCP43146 1447 aa35.17■■■■□ 3.22
PLOD3-215ENST00000487563 CCDC144AA2RUR9 1427 aa35.16■■■■□ 3.22
PLOD3-215ENST00000487563 MPHOSPH9Q99550 1183 aa35.15■■■■□ 3.22
PLOD3-215ENST00000487563 PPLO60437 1756 aa35.13■■■■□ 3.21
PLOD3-215ENST00000487563 JCADQ9P266 1359 aa35.13■■■■□ 3.21
PLOD3-215ENST00000487563 COL16A1Q07092 1604 aaPredicted RBP35.11■■■■□ 3.21
PLOD3-215ENST00000487563 ACIN1Q9UKV3 1341 aaKnown RBP35.09■■■■□ 3.21
PLOD3-215ENST00000487563 ADGRL3Q9HAR2 1447 aa35.09■■■■□ 3.21
PLOD3-215ENST00000487563 SETD5Q9C0A6 1442 aa35.08■■■■□ 3.21
PLOD3-215ENST00000487563 AHDC1Q5TGY3 1603 aaPredicted RBP35.08■■■■□ 3.21
PLOD3-215ENST00000487563 SETD1AO15047 1707 aaKnown RBP35.08■■■■□ 3.21
PLOD3-215ENST00000487563 BRINP3Q76B58 766 aa35.05■■■■□ 3.2
PLOD3-215ENST00000487563 PTCH1Q13635 1447 aa35.05■■■■□ 3.2
PLOD3-215ENST00000487563 NALCNQ8IZF0 1738 aa35.04■■■■□ 3.2
PLOD3-215ENST00000487563 RGL3Q3MIN7 710 aa35.04■■■■□ 3.2
PLOD3-215ENST00000487563 MST1RQ04912 1400 aa35.04■■■■□ 3.2
PLOD3-215ENST00000487563 RGS17Q9UGC6 210 aaPredicted RBP35.03■■■■□ 3.2
PLOD3-215ENST00000487563 ASXL1Q8IXJ9 1541 aa35.01■■■■□ 3.2
PLOD3-215ENST00000487563 SPATA31E1Q6ZUB1 1445 aa35■■■■□ 3.19
PLOD3-215ENST00000487563 ROBO2Q9HCK4 1378 aa34.99■■■■□ 3.19
PLOD3-215ENST00000487563 ANKRD30BQ9BXX2 1392 aa34.97■■■■□ 3.19
PLOD3-215ENST00000487563 ADGRF5Q8IZF2 1346 aa34.96■■■■□ 3.19
PLOD3-215ENST00000487563 SPATA31A6Q5VVP1 1343 aa34.95■■■■□ 3.19
PLOD3-215ENST00000487563 RAB3GAP2Q9H2M9 1393 aa34.95■■■■□ 3.19
PLOD3-215ENST00000487563 PRAG1Q86YV5 1406 aa34.95■■■■□ 3.19
PLOD3-215ENST00000487563 IFT172Q9UG01 1749 aa34.94■■■■□ 3.18
PLOD3-215ENST00000487563 SHPRHQ149N8 1683 aa34.93■■■■□ 3.18
PLOD3-215ENST00000487563 NHSL1Q5SYE7 1610 aa34.91■■■■□ 3.18
PLOD3-215ENST00000487563 MEX3CQ5U5Q3 659 aaKnown RBP34.9■■■■□ 3.18
PLOD3-215ENST00000487563 POTEAQ6S8J7 498 aa34.88■■■■□ 3.17
PLOD3-215ENST00000487563 LRP6O75581 1613 aa34.88■■■■□ 3.17
PLOD3-215ENST00000487563 C1orf167Q5SNV9 1468 aa34.86■■■■□ 3.17
PLOD3-215ENST00000487563 PIK3C2GO75747 1445 aa34.83■■■■□ 3.17
PLOD3-215ENST00000487563 STK26Q9P289 416 aa34.83■■■■□ 3.17
PLOD3-215ENST00000487563 DDX17Q92841 729 aaKnown RBP34.81■■■■□ 3.16
PLOD3-215ENST00000487563 LRRC59Q96AG4 307 aaKnown RBP34.81■■■■□ 3.16
PLOD3-215ENST00000487563 NUTM2BA6NNL0 878 aaPredicted RBP34.8■■■■□ 3.16
PLOD3-215ENST00000487563 NUTM2EB1AL46 878 aaPredicted RBP34.8■■■■□ 3.16
PLOD3-215ENST00000487563 NUTM2AQ8IVF1 878 aaPredicted RBP34.8■■■■□ 3.16
PLOD3-215ENST00000487563 LRPPRCP42704 1394 aaKnown RBP34.79■■■■□ 3.16
PLOD3-215ENST00000487563 TMEM132EQ6IEE7 984 aa34.77■■■■□ 3.16
PLOD3-215ENST00000487563 TECPR2O15040 1411 aa34.77■■■■□ 3.16
PLOD3-215ENST00000487563 CDC42BPGQ6DT37 1551 aa34.77■■■■□ 3.16
PLOD3-215ENST00000487563 ORAI2Q96SN7 254 aa34.75■■■■□ 3.15
PLOD3-215ENST00000487563 KNDC1Q76NI1 1749 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms