RNA–Protein interactions for RNA: ENST00000487431.1

RPL35-203, Transcript of ribosomal protein L35, humanhuman

TSL 1 (best)

Gene RPL35, Length 785 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-203ENST00000487431 KCNA6P17658 529 aa32.95■■■□□ 2.87
RPL35-203ENST00000487431 NKTRP30414 1462 aaKnown RBP32.93■■■□□ 2.86
RPL35-203ENST00000487431 CHD2O14647 1828 aaKnown RBP32.93■■■□□ 2.86
RPL35-203ENST00000487431 SLC26A8Q96RN1 970 aa32.92■■■□□ 2.86
RPL35-203ENST00000487431 TMEM94Q12767 1356 aa32.9■■■□□ 2.86
RPL35-203ENST00000487431 PLEKHG1Q9ULL1 1385 aa32.9■■■□□ 2.86
RPL35-203ENST00000487431 RIMS2Q9UQ26 1411 aa32.88■■■□□ 2.85
RPL35-203ENST00000487431 FAM135BQ49AJ0 1406 aa32.85■■■□□ 2.85
RPL35-203ENST00000487431 HDGFP51858 240 aaKnown RBP32.83■■■□□ 2.85
RPL35-203ENST00000487431 PROSER2Q86WR7 435 aaPredicted RBP32.81■■■□□ 2.84
RPL35-203ENST00000487431 NUP155O75694 1391 aa32.81■■■□□ 2.84
RPL35-203ENST00000487431 ROBO1Q9Y6N7 1651 aa32.8■■■□□ 2.84
RPL35-203ENST00000487431 SPHKAPQ2M3C7 1700 aa32.79■■■□□ 2.84
RPL35-203ENST00000487431 DIP2AQ14689 1571 aa32.79■■■□□ 2.84
RPL35-203ENST00000487431 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.77■■■□□ 2.84
RPL35-203ENST00000487431 ITGAEP38570 1179 aa32.76■■■□□ 2.83
RPL35-203ENST00000487431 BCANQ96GW7 911 aa32.76■■■□□ 2.83
RPL35-203ENST00000487431 PPP1R15AO75807 674 aaPredicted RBP32.75■■■□□ 2.83
RPL35-203ENST00000487431 TBX22Q9Y458 520 aa32.75■■■□□ 2.83
RPL35-203ENST00000487431 PPARGC1BQ86YN6 1023 aaKnown RBP32.74■■■□□ 2.83
RPL35-203ENST00000487431 SENP3Q9H4L4 574 aaPredicted RBP32.74■■■□□ 2.83
RPL35-203ENST00000487431 ADAMTS13Q76LX8 1427 aa32.74■■■□□ 2.83
RPL35-203ENST00000487431 RRBP1Q9P2E9 1410 aaKnown RBP32.73■■■□□ 2.83
RPL35-203ENST00000487431 RBM33Q96EV2 1170 aaKnown RBP32.72■■■□□ 2.83
RPL35-203ENST00000487431 MSH6P52701 1360 aa32.7■■■□□ 2.83
RPL35-203ENST00000487431 CHGAP10645 457 aaKnown RBP32.7■■■□□ 2.83
RPL35-203ENST00000487431 NCOA3Q9Y6Q9 1424 aa32.69■■■□□ 2.82
RPL35-203ENST00000487431 PIK3R4Q99570 1358 aa32.69■■■□□ 2.82
RPL35-203ENST00000487431 PHF23Q9BUL5 403 aaPredicted RBP32.68■■■□□ 2.82
RPL35-203ENST00000487431 TRPM2O94759 1503 aa32.64■■■□□ 2.82
RPL35-203ENST00000487431 NRXN3Q9Y4C0 1643 aa32.64■■■□□ 2.82
RPL35-203ENST00000487431 PHLPP1O60346 1717 aa32.61■■■□□ 2.81
RPL35-203ENST00000487431 NUTM2DQ5VT03 806 aaPredicted RBP32.61■■■□□ 2.81
RPL35-203ENST00000487431 SETBP1Q9Y6X0 1596 aa32.61■■■□□ 2.81
RPL35-203ENST00000487431 NAIPQ13075 1403 aa32.6■■■□□ 2.81
RPL35-203ENST00000487431 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.6■■■□□ 2.81
RPL35-203ENST00000487431 SLAIN2Q9P270 581 aa32.6■■■□□ 2.81
RPL35-203ENST00000487431 CLTCL1P53675 1640 aa32.59■■■□□ 2.81
RPL35-203ENST00000487431 XRN1Q8IZH2 1706 aaKnown RBP32.57■■■□□ 2.8
RPL35-203ENST00000487431 KIF1BO60333 1816 aa32.56■■■□□ 2.8
RPL35-203ENST00000487431 PTPRUQ92729 1446 aa32.54■■■□□ 2.8
RPL35-203ENST00000487431 RGS17Q9UGC6 210 aaPredicted RBP32.53■■■□□ 2.8
RPL35-203ENST00000487431 COL16A1Q07092 1604 aaPredicted RBP32.52■■■□□ 2.8
RPL35-203ENST00000487431 NEXMIFQ5QGS0 1516 aa32.51■■■□□ 2.8
RPL35-203ENST00000487431 HFM1A2PYH4 1435 aa32.49■■■□□ 2.79
RPL35-203ENST00000487431 C19orf44Q9H6X5 657 aa32.48■■■□□ 2.79
RPL35-203ENST00000487431 AMOTL2Q9Y2J4 779 aa32.48■■■□□ 2.79
RPL35-203ENST00000487431 CADPS2Q86UW7 1296 aa32.46■■■□□ 2.79
RPL35-203ENST00000487431 AHDC1Q5TGY3 1603 aaPredicted RBP32.45■■■□□ 2.79
RPL35-203ENST00000487431 DCCP43146 1447 aa32.43■■■□□ 2.78
RPL35-203ENST00000487431 C14orf37Q86TY3 774 aa32.43■■■□□ 2.78
RPL35-203ENST00000487431 JCADQ9P266 1359 aa32.43■■■□□ 2.78
RPL35-203ENST00000487431 ZNF326Q5BKZ1 582 aaKnown RBP32.42■■■□□ 2.78
RPL35-203ENST00000487431 METP08581 1390 aa32.4■■■□□ 2.78
RPL35-203ENST00000487431 ATF3P18847 181 aa32.39■■■□□ 2.78
RPL35-203ENST00000487431 SETD1AO15047 1707 aaKnown RBP32.39■■■□□ 2.78
RPL35-203ENST00000487431 SHPRHQ149N8 1683 aa32.38■■■□□ 2.77
RPL35-203ENST00000487431 PPLO60437 1756 aa32.33■■■□□ 2.77
RPL35-203ENST00000487431 NALCNQ8IZF0 1738 aa32.33■■■□□ 2.77
RPL35-203ENST00000487431 POTEAQ6S8J7 498 aa32.31■■■□□ 2.76
RPL35-203ENST00000487431 NHSL1Q5SYE7 1610 aa32.3■■■□□ 2.76
RPL35-203ENST00000487431 MST1RQ04912 1400 aa32.29■■■□□ 2.76
RPL35-203ENST00000487431 TRIM52Q96A61 297 aa32.29■■■□□ 2.76
RPL35-203ENST00000487431 SPATA31A6Q5VVP1 1343 aa32.28■■■□□ 2.76
RPL35-203ENST00000487431 ADGRL3Q9HAR2 1447 aa32.28■■■□□ 2.76
RPL35-203ENST00000487431 ASXL1Q8IXJ9 1541 aa32.28■■■□□ 2.76
RPL35-203ENST00000487431 BRINP3Q76B58 766 aa32.28■■■□□ 2.76
RPL35-203ENST00000487431 LRP6O75581 1613 aa32.27■■■□□ 2.76
RPL35-203ENST00000487431 SLC4A1APQ9BWU0 796 aaKnown RBP32.26■■■□□ 2.75
RPL35-203ENST00000487431 PRAG1Q86YV5 1406 aa32.25■■■□□ 2.75
RPL35-203ENST00000487431 RPGRIP1LQ68CZ1 1315 aa32.25■■■□□ 2.75
RPL35-203ENST00000487431 VGFO15240 615 aaPredicted RBP32.24■■■□□ 2.75
RPL35-203ENST00000487431 PTCH1Q13635 1447 aa32.23■■■□□ 2.75
RPL35-203ENST00000487431 SETD5Q9C0A6 1442 aa32.19■■■□□ 2.74
RPL35-203ENST00000487431 LAMC1P11047 1609 aa32.17■■■□□ 2.74
RPL35-203ENST00000487431 IFT172Q9UG01 1749 aa32.17■■■□□ 2.74
RPL35-203ENST00000487431 ROBO2Q9HCK4 1378 aa32.13■■■□□ 2.73
RPL35-203ENST00000487431 C1orf167Q5SNV9 1468 aa32.1■■■□□ 2.73
RPL35-203ENST00000487431 CCDC144AA2RUR9 1427 aa32.09■■■□□ 2.73
RPL35-203ENST00000487431 SPATA31E1Q6ZUB1 1445 aa32.09■■■□□ 2.73
RPL35-203ENST00000487431 FOXD1Q16676 465 aa32.08■■■□□ 2.73
RPL35-203ENST00000487431 MEX3CQ5U5Q3 659 aaKnown RBP32.07■■■□□ 2.72
RPL35-203ENST00000487431 ZNF772Q68DY9 489 aaPredicted RBP32.06■■■□□ 2.72
RPL35-203ENST00000487431 LRRC59Q96AG4 307 aaKnown RBP32.05■■■□□ 2.72
RPL35-203ENST00000487431 MPHOSPH9Q99550 1183 aa32.04■■■□□ 2.72
RPL35-203ENST00000487431 KNDC1Q76NI1 1749 aa32.01■■■□□ 2.72
RPL35-203ENST00000487431 PNPLA6Q8IY17 1366 aa32.01■■■□□ 2.71
RPL35-203ENST00000487431 CDC42BPGQ6DT37 1551 aa32.01■■■□□ 2.71
RPL35-203ENST00000487431 ANKRD30BQ9BXX2 1392 aa32■■■□□ 2.71
RPL35-203ENST00000487431 ADGRF5Q8IZF2 1346 aa32■■■□□ 2.71
RPL35-203ENST00000487431 DDX17Q92841 729 aaKnown RBP31.99■■■□□ 2.71
RPL35-203ENST00000487431 ACIN1Q9UKV3 1341 aaKnown RBP31.99■■■□□ 2.71
RPL35-203ENST00000487431 TECPR2O15040 1411 aa31.98■■■□□ 2.71
RPL35-203ENST00000487431 NUTM2BA6NNL0 878 aaPredicted RBP31.97■■■□□ 2.71
RPL35-203ENST00000487431 NUTM2EB1AL46 878 aaPredicted RBP31.97■■■□□ 2.71
RPL35-203ENST00000487431 NUTM2AQ8IVF1 878 aaPredicted RBP31.97■■■□□ 2.71
RPL35-203ENST00000487431 PIK3C2GO75747 1445 aa31.94■■■□□ 2.7
RPL35-203ENST00000487431 SOS2Q07890 1332 aaPredicted RBP31.94■■■□□ 2.7
RPL35-203ENST00000487431 CDK12Q9NYV4 1490 aaPredicted RBP31.93■■■□□ 2.7
RPL35-203ENST00000487431 RGL3Q3MIN7 710 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms