RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TXNDC2Q86VQ3 553 aa28.24■■■□□ 2.11
PCOLCE-208ENST00000487172 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.24■■■□□ 2.11
PCOLCE-208ENST00000487172 POLR1AO95602 1720 aaPredicted RBP28.23■■■□□ 2.11
PCOLCE-208ENST00000487172 NCKAP5LQ9HCH0 1330 aa28.22■■■□□ 2.11
PCOLCE-208ENST00000487172 SCAF11Q99590 1463 aaKnown RBP28.22■■■□□ 2.11
PCOLCE-208ENST00000487172 MED14O60244 1454 aa28.21■■■□□ 2.11
PCOLCE-208ENST00000487172 CLSPNQ9HAW4 1339 aa28.2■■■□□ 2.11
PCOLCE-208ENST00000487172 NEXMIFQ5QGS0 1516 aa28.19■■■□□ 2.1
PCOLCE-208ENST00000487172 RGL3Q3MIN7 710 aa28.19■■■□□ 2.1
PCOLCE-208ENST00000487172 DMRT2Q9Y5R5 561 aa28.19■■■□□ 2.1
PCOLCE-208ENST00000487172 SIN3AQ96ST3 1273 aa28.18■■■□□ 2.1
PCOLCE-208ENST00000487172 PPLO60437 1756 aa28.14■■■□□ 2.1
PCOLCE-208ENST00000487172 NPHP4O75161 1426 aaPredicted RBP28.14■■■□□ 2.1
PCOLCE-208ENST00000487172 VGFO15240 615 aaPredicted RBP28.13■■■□□ 2.09
PCOLCE-208ENST00000487172 PLEKHG1Q9ULL1 1385 aa28.12■■■□□ 2.09
PCOLCE-208ENST00000487172 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
PCOLCE-208ENST00000487172 PPP1R15AO75807 674 aaPredicted RBP28.12■■■□□ 2.09
PCOLCE-208ENST00000487172 CCER1Q8TC90 406 aaPredicted RBP28.11■■■□□ 2.09
PCOLCE-208ENST00000487172 STAC3Q96MF2 364 aa28.11■■■□□ 2.09
PCOLCE-208ENST00000487172 NEUROD1Q13562 356 aa28.1■■■□□ 2.09
PCOLCE-208ENST00000487172 NUTM2DQ5VT03 806 aaPredicted RBP28.1■■■□□ 2.09
PCOLCE-208ENST00000487172 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
PCOLCE-208ENST00000487172 MYOM2P54296 1465 aa28.05■■■□□ 2.08
PCOLCE-208ENST00000487172 DCAF11Q8TEB1 546 aa28.03■■■□□ 2.08
PCOLCE-208ENST00000487172 SETBP1Q9Y6X0 1596 aa28.03■■■□□ 2.08
PCOLCE-208ENST00000487172 ADGRF5Q8IZF2 1346 aa28.01■■■□□ 2.07
PCOLCE-208ENST00000487172 L3MBTL2Q969R5 705 aa28.01■■■□□ 2.07
PCOLCE-208ENST00000487172 BCANQ96GW7 911 aa28.01■■■□□ 2.07
PCOLCE-208ENST00000487172 NRXN1Q9ULB1 1477 aa28.01■■■□□ 2.07
PCOLCE-208ENST00000487172 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.07
PCOLCE-208ENST00000487172 TBX22Q9Y458 520 aa28■■■□□ 2.07
PCOLCE-208ENST00000487172 NRXN3Q9Y4C0 1643 aa28■■■□□ 2.07
PCOLCE-208ENST00000487172 DIP2AQ14689 1571 aa27.98■■■□□ 2.07
PCOLCE-208ENST00000487172 SLC26A8Q96RN1 970 aa27.97■■■□□ 2.07
PCOLCE-208ENST00000487172 PIK3C2GO75747 1445 aa27.96■■■□□ 2.07
PCOLCE-208ENST00000487172 KDM2AQ9Y2K7 1162 aa27.96■■■□□ 2.07
PCOLCE-208ENST00000487172 TONSLQ96HA7 1378 aa27.96■■■□□ 2.07
PCOLCE-208ENST00000487172 TIMELESSQ9UNS1 1208 aa27.95■■■□□ 2.06
PCOLCE-208ENST00000487172 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
PCOLCE-208ENST00000487172 ALKQ9UM73 1620 aa27.92■■■□□ 2.06
PCOLCE-208ENST00000487172 PIK3R4Q99570 1358 aa27.91■■■□□ 2.06
PCOLCE-208ENST00000487172 C14orf93Q9H972 538 aaKnown RBP27.9■■■□□ 2.06
PCOLCE-208ENST00000487172 SETD1AO15047 1707 aaKnown RBP27.89■■■□□ 2.06
PCOLCE-208ENST00000487172 PRAG1Q86YV5 1406 aa27.86■■■□□ 2.05
PCOLCE-208ENST00000487172 LAMC1P11047 1609 aa27.86■■■□□ 2.05
PCOLCE-208ENST00000487172 CHD2O14647 1828 aaKnown RBP27.85■■■□□ 2.05
PCOLCE-208ENST00000487172 KCNA6P17658 529 aa27.85■■■□□ 2.05
PCOLCE-208ENST00000487172 ZNF335Q9H4Z2 1342 aaPredicted RBP27.85■■■□□ 2.05
PCOLCE-208ENST00000487172 METP08581 1390 aa27.85■■■□□ 2.05
PCOLCE-208ENST00000487172 CFAP70Q5T0N1 1121 aa27.84■■■□□ 2.05
PCOLCE-208ENST00000487172 NWD1Q149M9 1564 aa27.82■■■□□ 2.04
PCOLCE-208ENST00000487172 KIAA1210Q9ULL0 1709 aa27.81■■■□□ 2.04
PCOLCE-208ENST00000487172 LTBP4Q8N2S1 1624 aa27.81■■■□□ 2.04
PCOLCE-208ENST00000487172 STRCP1A6NGW2 1772 aa27.79■■■□□ 2.04
PCOLCE-208ENST00000487172 PTPRUQ92729 1446 aa27.79■■■□□ 2.04
PCOLCE-208ENST00000487172 CPS1P31327 1500 aa27.78■■■□□ 2.04
PCOLCE-208ENST00000487172 AMOTL2Q9Y2J4 779 aa27.78■■■□□ 2.04
PCOLCE-208ENST00000487172 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
PCOLCE-208ENST00000487172 NBPF8Q3BBV2 869 aa27.76■■■□□ 2.03
PCOLCE-208ENST00000487172 TMEM132EQ6IEE7 984 aa27.75■■■□□ 2.03
PCOLCE-208ENST00000487172 NKTRP30414 1462 aaKnown RBP27.75■■■□□ 2.03
PCOLCE-208ENST00000487172 XRN1Q8IZH2 1706 aaKnown RBP27.75■■■□□ 2.03
PCOLCE-208ENST00000487172 ADGRB1O14514 1584 aa27.74■■■□□ 2.03
PCOLCE-208ENST00000487172 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
PCOLCE-208ENST00000487172 TRPM1Q7Z4N2 1603 aa27.72■■■□□ 2.03
PCOLCE-208ENST00000487172 YTHDC2Q9H6S0 1430 aaKnown RBP27.72■■■□□ 2.03
PCOLCE-208ENST00000487172 ABCC11Q96J66 1382 aa27.72■■■□□ 2.03
PCOLCE-208ENST00000487172 TECPR2O15040 1411 aa27.69■■■□□ 2.02
PCOLCE-208ENST00000487172 NBPF1Q3BBV0 1214 aa27.69■■■□□ 2.02
PCOLCE-208ENST00000487172 LRRC7Q96NW7 1537 aa27.68■■■□□ 2.02
PCOLCE-208ENST00000487172 SIRT1Q96EB6 747 aa27.68■■■□□ 2.02
PCOLCE-208ENST00000487172 PTCH1Q13635 1447 aa27.67■■■□□ 2.02
PCOLCE-208ENST00000487172 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
PCOLCE-208ENST00000487172 PROSER2Q86WR7 435 aaPredicted RBP27.67■■■□□ 2.02
PCOLCE-208ENST00000487172 NCOA3Q9Y6Q9 1424 aa27.65■■■□□ 2.02
PCOLCE-208ENST00000487172 RALGAPBQ86X10 1494 aa27.64■■■□□ 2.02
PCOLCE-208ENST00000487172 STK26Q9P289 416 aa27.64■■■□□ 2.02
PCOLCE-208ENST00000487172 GPRASP1Q5JY77 1395 aa27.63■■■□□ 2.01
PCOLCE-208ENST00000487172 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
PCOLCE-208ENST00000487172 ROCK2O75116 1388 aaKnown RBP27.62■■■□□ 2.01
PCOLCE-208ENST00000487172 ROBO2Q9HCK4 1378 aa27.62■■■□□ 2.01
PCOLCE-208ENST00000487172 CERKQ8TCT0 537 aa27.62■■■□□ 2.01
PCOLCE-208ENST00000487172 IQSEC2Q5JU85 1478 aa27.62■■■□□ 2.01
PCOLCE-208ENST00000487172 TMEM94Q12767 1356 aa27.61■■■□□ 2.01
PCOLCE-208ENST00000487172 FAM135BQ49AJ0 1406 aa27.61■■■□□ 2.01
PCOLCE-208ENST00000487172 XIRP1Q702N8 1843 aaKnown RBP27.6■■■□□ 2.01
PCOLCE-208ENST00000487172 TRAK1Q9UPV9 953 aa27.59■■■□□ 2.01
PCOLCE-208ENST00000487172 RBM33Q96EV2 1170 aaKnown RBP27.54■■■□□ 2
PCOLCE-208ENST00000487172 CARD11Q9BXL7 1154 aa27.54■■■□□ 2
PCOLCE-208ENST00000487172 ARHGEF28Q8N1W1 1705 aaKnown RBP27.53■■■□□ 2
PCOLCE-208ENST00000487172 WAPLQ7Z5K2 1190 aa27.53■■■□□ 2
PCOLCE-208ENST00000487172 PRAM1Q96QH2 718 aa27.52■■■□□ 2
PCOLCE-208ENST00000487172 PLEKHH1Q9ULM0 1364 aa27.51■■□□□ 1.99
PCOLCE-208ENST00000487172 C19orf44Q9H6X5 657 aa27.51■■□□□ 1.99
PCOLCE-208ENST00000487172 POGKQ9P215 609 aa27.5■■□□□ 1.99
PCOLCE-208ENST00000487172 ADGRL3Q9HAR2 1447 aa27.5■■□□□ 1.99
PCOLCE-208ENST00000487172 MSH6P52701 1360 aa27.48■■□□□ 1.99
PCOLCE-208ENST00000487172 C14orf37Q86TY3 774 aa27.48■■□□□ 1.99
PCOLCE-208ENST00000487172 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.47■■□□□ 1.99
PCOLCE-208ENST00000487172 EIF3AQ14152 1382 aaKnown RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms