RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 DDX19BQ9UMR2 479 aa9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 GRIN2BQ13224 1484 aa9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 NASPP49321 788 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 ERBINQ96RT1 1412 aa9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 RUNDC1Q96C34 613 aa9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 BCL11BQ9C0K0 894 aaPredicted RBP9.55□□□□□ -0.88
COL6A4P1-202ENST00000487147 CUL7Q14999 1698 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 SNAPC4Q5SXM2 1469 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 SPATA31E1Q6ZUB1 1445 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 PARD3Q8TEW0 1356 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 IGHDP01880 384 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 ANKRD45Q5TZF3 282 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 PRG4Q92954 1404 aaPredicted RBP9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 KIAA2012Q0VF49 1180 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 JPH4Q96JJ6 628 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 DNMBPQ6XZF7 1577 aa9.54□□□□□ -0.88
COL6A4P1-202ENST00000487147 NINLQ9Y2I6 1382 aa9.53□□□□□ -0.88
COL6A4P1-202ENST00000487147 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL6A4P1-202ENST00000487147 LNPKQ9C0E8 428 aa9.53□□□□□ -0.88
COL6A4P1-202ENST00000487147 TEX14Q8IWB6 1497 aa9.53□□□□□ -0.88
COL6A4P1-202ENST00000487147 TCP11L2Q8N4U5 519 aa9.53□□□□□ -0.88
COL6A4P1-202ENST00000487147 KANK1Q14678 1352 aa9.53□□□□□ -0.88
COL6A4P1-202ENST00000487147 CLCN1P35523 988 aa9.52□□□□□ -0.88
COL6A4P1-202ENST00000487147 C9orf84Q5VXU9 1444 aa9.52□□□□□ -0.88
COL6A4P1-202ENST00000487147 TCOF1Q13428 1488 aaKnown RBP9.52□□□□□ -0.88
COL6A4P1-202ENST00000487147 TROQ12816 1431 aaPredicted RBP9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 APBB1O00213 710 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 CHAF1AQ13111 956 aaPredicted RBP9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 RRAGDQ9NQL2 400 aaPredicted RBP9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 KDM2BQ8NHM5 1336 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 KCNA4P22459 653 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 KLHL34Q8N239 644 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 R3HCC1Q9Y3T6 440 aaKnown RBP9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 RALGAPBQ86X10 1494 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 RBM10P98175 930 aaKnown RBP9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 PANK2Q9BZ23 570 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 CC2D2AQ9P2K1 1620 aa9.52□□□□□ -0.89
COL6A4P1-202ENST00000487147 NKTRP30414 1462 aaKnown RBP9.51□□□□□ -0.89
COL6A4P1-202ENST00000487147 CCDC173Q0VFZ6 552 aa9.51□□□□□ -0.89
COL6A4P1-202ENST00000487147 SAFB2Q14151 953 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL6A4P1-202ENST00000487147 KIAA1211Q6ZU35 1233 aa9.51□□□□□ -0.89
COL6A4P1-202ENST00000487147 THOC2Q8NI27 1593 aaKnown RBP9.51□□□□□ -0.89
COL6A4P1-202ENST00000487147 TBC1D32Q96NH3 1257 aa9.51□□□□□ -0.89
COL6A4P1-202ENST00000487147 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 STAG3Q9UJ98 1225 aa9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 ST18O60284 1047 aa9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 SRPK2P78362 688 aaKnown RBP9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 MCTP1Q6DN14 999 aa9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 WWC1Q8IX03 1113 aa9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 FOXD4L4Q8WXT5 416 aaPredicted RBP9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 MAP7D2Q96T17 732 aa9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
COL6A4P1-202ENST00000487147 NESP48681 1621 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 SEC24BO95487 1268 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 TAF7LQ5H9L4 462 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 CAMSAP2Q08AD1 1489 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 EFCAB2Q5VUJ9 269 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 MCCP23508 829 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
COL6A4P1-202ENST00000487147 NUCB2P80303 420 aa9.48□□□□□ -0.89
COL6A4P1-202ENST00000487147 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
COL6A4P1-202ENST00000487147 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
COL6A4P1-202ENST00000487147 FGD1P98174 961 aa9.48□□□□□ -0.89
COL6A4P1-202ENST00000487147 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
COL6A4P1-202ENST00000487147 CAVIN1Q6NZI2 390 aaKnown RBP9.47□□□□□ -0.89
COL6A4P1-202ENST00000487147 PLEKHH1Q9ULM0 1364 aa9.47□□□□□ -0.89
COL6A4P1-202ENST00000487147 RARSP54136 660 aaKnown RBP9.47□□□□□ -0.89
COL6A4P1-202ENST00000487147 MTHFSP49914 203 aa9.47□□□□□ -0.89
COL6A4P1-202ENST00000487147 ZSCAN30Q86W11 494 aa9.47□□□□□ -0.89
COL6A4P1-202ENST00000487147 STAC3Q96MF2 364 aa9.47□□□□□ -0.89
COL6A4P1-202ENST00000487147 KIF3BO15066 747 aa9.46□□□□□ -0.89
COL6A4P1-202ENST00000487147 KIF16BQ96L93 1317 aa9.46□□□□□ -0.89
COL6A4P1-202ENST00000487147 NCBP3Q53F19 620 aaKnown RBP9.46□□□□□ -0.9
COL6A4P1-202ENST00000487147 WDR63Q8IWG1 891 aa9.46□□□□□ -0.9
COL6A4P1-202ENST00000487147 ELL2O00472 640 aaPredicted RBP9.46□□□□□ -0.9
COL6A4P1-202ENST00000487147 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 EXOSC9Q06265 439 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 MTERF4Q7Z6M4 381 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 PDCL3Q9H2J4 239 aa9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 IQGAP2Q13576 1575 aa9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 NOL8Q76FK4 1167 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 CTTNBP2Q8WZ74 1663 aa9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 K7ELQ4 463 aaPredicted RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 PHF14O94880 888 aa9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 TNPO1Q92973 898 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 TSR2Q969E8 191 aaKnown RBP9.45□□□□□ -0.9
COL6A4P1-202ENST00000487147 PZPP20742 1482 aa9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 RIPK4P57078 832 aa9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 STK26Q9P289 416 aa9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 FOXD4L6Q3SYB3 417 aaPredicted RBP9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 FOXD4L3Q6VB84 417 aaPredicted RBP9.44□□□□□ -0.9
COL6A4P1-202ENST00000487147 HAP1P54257 671 aaPredicted RBP9.43□□□□□ -0.9
COL6A4P1-202ENST00000487147 RNF214Q8ND24 703 aa9.43□□□□□ -0.9
COL6A4P1-202ENST00000487147 ATF7IPQ6VMQ6 1270 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms