RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
NEK4-204ENST00000487068 TRPM2O94759 1503 aa15.24■□□□□ 0.03
NEK4-204ENST00000487068 NPHP4O75161 1426 aaPredicted RBP15.24■□□□□ 0.03
NEK4-204ENST00000487068 IDI1Q13907 227 aa15.23■□□□□ 0.03
NEK4-204ENST00000487068 SLC52A1Q9NWF4 448 aa15.23■□□□□ 0.03
NEK4-204ENST00000487068 SETD5Q9C0A6 1442 aa15.23■□□□□ 0.03
NEK4-204ENST00000487068 ARHGAP23Q9P227 1491 aa15.22■□□□□ 0.03
NEK4-204ENST00000487068 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
NEK4-204ENST00000487068 MED14O60244 1454 aa15.21■□□□□ 0.03
NEK4-204ENST00000487068 EID1Q9Y6B2 187 aa15.21■□□□□ 0.03
NEK4-204ENST00000487068 TMEM2Q9UHN6 1383 aa15.2■□□□□ 0.02
NEK4-204ENST00000487068 ALKQ9UM73 1620 aa15.19■□□□□ 0.02
NEK4-204ENST00000487068 RAB3GAP2Q9H2M9 1393 aa15.19■□□□□ 0.02
NEK4-204ENST00000487068 TXNDC2Q86VQ3 553 aa15.18■□□□□ 0.02
NEK4-204ENST00000487068 STRCP1A6NGW2 1772 aa15.18■□□□□ 0.02
NEK4-204ENST00000487068 PPP1R15AO75807 674 aaPredicted RBP15.17■□□□□ 0.02
NEK4-204ENST00000487068 BCANQ96GW7 911 aa15.17■□□□□ 0.02
NEK4-204ENST00000487068 RIMS2Q9UQ26 1411 aa15.16■□□□□ 0.02
NEK4-204ENST00000487068 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
NEK4-204ENST00000487068 PPLO60437 1756 aa15.14■□□□□ 0.01
NEK4-204ENST00000487068 LRRC7Q96NW7 1537 aa15.14■□□□□ 0.01
NEK4-204ENST00000487068 ZNF326Q5BKZ1 582 aaKnown RBP15.14■□□□□ 0.01
NEK4-204ENST00000487068 ZFYVE9O95405 1425 aa15.13■□□□□ 0.01
NEK4-204ENST00000487068 LTKP29376 864 aa15.13■□□□□ 0.01
NEK4-204ENST00000487068 MPHOSPH9Q99550 1183 aa15.12■□□□□ 0.01
NEK4-204ENST00000487068 CCDC144AA2RUR9 1427 aa15.11■□□□□ 0.01
NEK4-204ENST00000487068 HDGFP51858 240 aaKnown RBP15.11■□□□□ 0.01
NEK4-204ENST00000487068 CHD2O14647 1828 aaKnown RBP15.1■□□□□ 0.01
NEK4-204ENST00000487068 IFT172Q9UG01 1749 aa15.1■□□□□ 0.01
NEK4-204ENST00000487068 NUTM2DQ5VT03 806 aaPredicted RBP15.1■□□□□ 0.01
NEK4-204ENST00000487068 NEXMIFQ5QGS0 1516 aa15.1■□□□□ 0.01
NEK4-204ENST00000487068 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
NEK4-204ENST00000487068 XIRP1Q702N8 1843 aaKnown RBP15.1■□□□□ 0.01
NEK4-204ENST00000487068 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.09■□□□□ 0.01
NEK4-204ENST00000487068 PLEKHG1Q9ULL1 1385 aa15.09■□□□□ 0.01
NEK4-204ENST00000487068 SLC26A8Q96RN1 970 aa15.07■□□□□ 0
NEK4-204ENST00000487068 NRXN3Q9Y4C0 1643 aa15.06■□□□□ 0
NEK4-204ENST00000487068 NWD1Q149M9 1564 aa15.06■□□□□ 0
NEK4-204ENST00000487068 SETBP1Q9Y6X0 1596 aa15.04■□□□□ -0
NEK4-204ENST00000487068 SETD1AO15047 1707 aaKnown RBP15.02□□□□□ -0.01
NEK4-204ENST00000487068 NKTRP30414 1462 aaKnown RBP15.01□□□□□ -0.01
NEK4-204ENST00000487068 ADAMTS13Q76LX8 1427 aa15□□□□□ -0.01
NEK4-204ENST00000487068 RGL3Q3MIN7 710 aa14.99□□□□□ -0.01
NEK4-204ENST00000487068 RGS17Q9UGC6 210 aaPredicted RBP14.99□□□□□ -0.01
NEK4-204ENST00000487068 XRN1Q8IZH2 1706 aaKnown RBP14.98□□□□□ -0.01
NEK4-204ENST00000487068 FAM135BQ49AJ0 1406 aa14.98□□□□□ -0.01
NEK4-204ENST00000487068 LAMC1P11047 1609 aa14.97□□□□□ -0.01
NEK4-204ENST00000487068 HRCP23327 699 aa14.97□□□□□ -0.01
NEK4-204ENST00000487068 TRIM26Q12899 539 aaPredicted RBP14.97□□□□□ -0.01
NEK4-204ENST00000487068 KCNA6P17658 529 aa14.96□□□□□ -0.01
NEK4-204ENST00000487068 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.01
NEK4-204ENST00000487068 RPGRIP1LQ68CZ1 1315 aa14.95□□□□□ -0.02
NEK4-204ENST00000487068 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
NEK4-204ENST00000487068 TBX22Q9Y458 520 aa14.95□□□□□ -0.02
NEK4-204ENST00000487068 ROBO1Q9Y6N7 1651 aa14.95□□□□□ -0.02
NEK4-204ENST00000487068 PROSER2Q86WR7 435 aaPredicted RBP14.94□□□□□ -0.02
NEK4-204ENST00000487068 TMEM94Q12767 1356 aa14.94□□□□□ -0.02
NEK4-204ENST00000487068 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
NEK4-204ENST00000487068 ANKRD30BQ9BXX2 1392 aa14.94□□□□□ -0.02
NEK4-204ENST00000487068 C14orf37Q86TY3 774 aa14.93□□□□□ -0.02
NEK4-204ENST00000487068 NALCNQ8IZF0 1738 aa14.92□□□□□ -0.02
NEK4-204ENST00000487068 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.92□□□□□ -0.02
NEK4-204ENST00000487068 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
NEK4-204ENST00000487068 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
NEK4-204ENST00000487068 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
NEK4-204ENST00000487068 MYOM2P54296 1465 aa14.91□□□□□ -0.02
NEK4-204ENST00000487068 MSH6P52701 1360 aa14.91□□□□□ -0.02
NEK4-204ENST00000487068 METP08581 1390 aa14.9□□□□□ -0.02
NEK4-204ENST00000487068 POTEAQ6S8J7 498 aa14.9□□□□□ -0.02
NEK4-204ENST00000487068 PTPRUQ92729 1446 aa14.9□□□□□ -0.02
NEK4-204ENST00000487068 AMOTL2Q9Y2J4 779 aa14.89□□□□□ -0.03
NEK4-204ENST00000487068 ADGRF5Q8IZF2 1346 aa14.89□□□□□ -0.03
NEK4-204ENST00000487068 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
NEK4-204ENST00000487068 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
NEK4-204ENST00000487068 PHLPP1O60346 1717 aa14.87□□□□□ -0.03
NEK4-204ENST00000487068 PIAS4Q8N2W9 510 aaPredicted RBP14.86□□□□□ -0.03
NEK4-204ENST00000487068 ASXL1Q8IXJ9 1541 aa14.85□□□□□ -0.03
NEK4-204ENST00000487068 DCAF11Q8TEB1 546 aa14.84□□□□□ -0.03
NEK4-204ENST00000487068 KDM2AQ9Y2K7 1162 aa14.84□□□□□ -0.03
NEK4-204ENST00000487068 PTCH1Q13635 1447 aa14.83□□□□□ -0.03
NEK4-204ENST00000487068 NRXN1Q9ULB1 1477 aa14.83□□□□□ -0.03
NEK4-204ENST00000487068 JCADQ9P266 1359 aa14.83□□□□□ -0.04
NEK4-204ENST00000487068 NCOA3Q9Y6Q9 1424 aa14.83□□□□□ -0.04
NEK4-204ENST00000487068 KIAA1210Q9ULL0 1709 aa14.82□□□□□ -0.04
NEK4-204ENST00000487068 DHX57Q6P158 1386 aaKnown RBP14.82□□□□□ -0.04
NEK4-204ENST00000487068 STK26Q9P289 416 aa14.81□□□□□ -0.04
NEK4-204ENST00000487068 ATF3P18847 181 aa14.8□□□□□ -0.04
NEK4-204ENST00000487068 SLAIN2Q9P270 581 aa14.8□□□□□ -0.04
NEK4-204ENST00000487068 ADGRL3Q9HAR2 1447 aa14.8□□□□□ -0.04
NEK4-204ENST00000487068 COL16A1Q07092 1604 aaPredicted RBP14.8□□□□□ -0.04
NEK4-204ENST00000487068 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
NEK4-204ENST00000487068 DCCP43146 1447 aa14.78□□□□□ -0.04
NEK4-204ENST00000487068 YTHDC2Q9H6S0 1430 aaKnown RBP14.78□□□□□ -0.04
NEK4-204ENST00000487068 ROBO2Q9HCK4 1378 aa14.78□□□□□ -0.04
NEK4-204ENST00000487068 NEUROD1Q13562 356 aa14.78□□□□□ -0.04
NEK4-204ENST00000487068 TMEM132EQ6IEE7 984 aa14.78□□□□□ -0.04
NEK4-204ENST00000487068 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.04
NEK4-204ENST00000487068 PRAG1Q86YV5 1406 aa14.77□□□□□ -0.04
NEK4-204ENST00000487068 CFAP70Q5T0N1 1121 aa14.77□□□□□ -0.05
NEK4-204ENST00000487068 CADPS2Q86UW7 1296 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms