RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 HDGFP51858 240 aaKnown RBP34.22■■■■□ 3.07
SREBF1-214ENST00000486311 RIMS2Q9UQ26 1411 aa34.21■■■■□ 3.07
SREBF1-214ENST00000486311 PLEKHG1Q9ULL1 1385 aa34.21■■■■□ 3.07
SREBF1-214ENST00000486311 TMEM131LA2VDJ0 1609 aa34.2■■■■□ 3.07
SREBF1-214ENST00000486311 E9PCH4 1651 aa34.2■■■■□ 3.07
SREBF1-214ENST00000486311 BCANQ96GW7 911 aa34.2■■■■□ 3.07
SREBF1-214ENST00000486311 TMEM94Q12767 1356 aa34.2■■■■□ 3.07
SREBF1-214ENST00000486311 RRBP1Q9P2E9 1410 aaKnown RBP34.16■■■■□ 3.06
SREBF1-214ENST00000486311 PPP1R15AO75807 674 aaPredicted RBP34.16■■■■□ 3.06
SREBF1-214ENST00000486311 CHGAP10645 457 aaKnown RBP34.16■■■■□ 3.06
SREBF1-214ENST00000486311 PROSER2Q86WR7 435 aaPredicted RBP34.15■■■■□ 3.06
SREBF1-214ENST00000486311 XIRP1Q702N8 1843 aaKnown RBP34.15■■■■□ 3.06
SREBF1-214ENST00000486311 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.14■■■■□ 3.06
SREBF1-214ENST00000486311 NKTRP30414 1462 aaKnown RBP34.14■■■■□ 3.06
SREBF1-214ENST00000486311 NWD1Q149M9 1564 aa34.13■■■■□ 3.05
SREBF1-214ENST00000486311 SENP3Q9H4L4 574 aaPredicted RBP34.1■■■■□ 3.05
SREBF1-214ENST00000486311 TBX22Q9Y458 520 aa34.09■■■■□ 3.05
SREBF1-214ENST00000486311 MYO5BQ9ULV0 1848 aa34.09■■■■□ 3.05
SREBF1-214ENST00000486311 RBM33Q96EV2 1170 aaKnown RBP34.08■■■■□ 3.05
SREBF1-214ENST00000486311 FAM135BQ49AJ0 1406 aa34.07■■■■□ 3.04
SREBF1-214ENST00000486311 NUTM2DQ5VT03 806 aaPredicted RBP34.03■■■■□ 3.04
SREBF1-214ENST00000486311 ADAMTS13Q76LX8 1427 aa34.02■■■■□ 3.04
SREBF1-214ENST00000486311 NAIPQ13075 1403 aa34.01■■■■□ 3.03
SREBF1-214ENST00000486311 MSH6P52701 1360 aa33.98■■■■□ 3.03
SREBF1-214ENST00000486311 PHF23Q9BUL5 403 aaPredicted RBP33.96■■■■□ 3.03
SREBF1-214ENST00000486311 PIK3R4Q99570 1358 aa33.96■■■■□ 3.03
SREBF1-214ENST00000486311 DIP2AQ14689 1571 aa33.95■■■■□ 3.03
SREBF1-214ENST00000486311 CHD2O14647 1828 aaKnown RBP33.95■■■■□ 3.02
SREBF1-214ENST00000486311 NCOA3Q9Y6Q9 1424 aa33.93■■■■□ 3.02
SREBF1-214ENST00000486311 SPHKAPQ2M3C7 1700 aa33.9■■■■□ 3.02
SREBF1-214ENST00000486311 SLAIN2Q9P270 581 aa33.89■■■■□ 3.02
SREBF1-214ENST00000486311 HFM1A2PYH4 1435 aa33.88■■■■□ 3.01
SREBF1-214ENST00000486311 ZNF326Q5BKZ1 582 aaKnown RBP33.86■■■■□ 3.01
SREBF1-214ENST00000486311 ROBO1Q9Y6N7 1651 aa33.86■■■■□ 3.01
SREBF1-214ENST00000486311 TRPM2O94759 1503 aa33.85■■■■□ 3.01
SREBF1-214ENST00000486311 AMOTL2Q9Y2J4 779 aa33.83■■■■□ 3.01
SREBF1-214ENST00000486311 PTPRUQ92729 1446 aa33.82■■■■□ 3
SREBF1-214ENST00000486311 C14orf37Q86TY3 774 aa33.81■■■■□ 3
SREBF1-214ENST00000486311 TRIM52Q96A61 297 aa33.81■■■■□ 3
SREBF1-214ENST00000486311 SETBP1Q9Y6X0 1596 aa33.81■■■■□ 3
SREBF1-214ENST00000486311 CLTCL1P53675 1640 aa33.79■■■■□ 3
SREBF1-214ENST00000486311 C19orf44Q9H6X5 657 aa33.79■■■■□ 3
SREBF1-214ENST00000486311 NRXN3Q9Y4C0 1643 aa33.77■■■■□ 3
SREBF1-214ENST00000486311 CADPS2Q86UW7 1296 aa33.76■■■□□ 2.99
SREBF1-214ENST00000486311 NEXMIFQ5QGS0 1516 aa33.74■■■□□ 2.99
SREBF1-214ENST00000486311 ATF3P18847 181 aa33.73■■■□□ 2.99
SREBF1-214ENST00000486311 SLC4A1APQ9BWU0 796 aaKnown RBP33.73■■■□□ 2.99
SREBF1-214ENST00000486311 RGS17Q9UGC6 210 aaPredicted RBP33.73■■■□□ 2.99
SREBF1-214ENST00000486311 METP08581 1390 aa33.72■■■□□ 2.99
SREBF1-214ENST00000486311 XRN1Q8IZH2 1706 aaKnown RBP33.67■■■□□ 2.98
SREBF1-214ENST00000486311 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.67■■■□□ 2.98
SREBF1-214ENST00000486311 JCADQ9P266 1359 aa33.66■■■□□ 2.98
SREBF1-214ENST00000486311 DCCP43146 1447 aa33.64■■■□□ 2.98
SREBF1-214ENST00000486311 PHLPP1O60346 1717 aa33.63■■■□□ 2.97
SREBF1-214ENST00000486311 VGFO15240 615 aaPredicted RBP33.63■■■□□ 2.97
SREBF1-214ENST00000486311 RPGRIP1LQ68CZ1 1315 aa33.62■■■□□ 2.97
SREBF1-214ENST00000486311 KIF1BO60333 1816 aa33.61■■■□□ 2.97
SREBF1-214ENST00000486311 COL16A1Q07092 1604 aaPredicted RBP33.59■■■□□ 2.97
SREBF1-214ENST00000486311 BRINP3Q76B58 766 aa33.57■■■□□ 2.96
SREBF1-214ENST00000486311 AHDC1Q5TGY3 1603 aaPredicted RBP33.57■■■□□ 2.96
SREBF1-214ENST00000486311 FOXD1Q16676 465 aa33.55■■■□□ 2.96
SREBF1-214ENST00000486311 ADGRL3Q9HAR2 1447 aa33.53■■■□□ 2.96
SREBF1-214ENST00000486311 MST1RQ04912 1400 aa33.53■■■□□ 2.96
SREBF1-214ENST00000486311 POTEAQ6S8J7 498 aa33.51■■■□□ 2.95
SREBF1-214ENST00000486311 MPHOSPH9Q99550 1183 aa33.5■■■□□ 2.95
SREBF1-214ENST00000486311 SPATA31A6Q5VVP1 1343 aa33.5■■■□□ 2.95
SREBF1-214ENST00000486311 PTCH1Q13635 1447 aa33.49■■■□□ 2.95
SREBF1-214ENST00000486311 CCDC144AA2RUR9 1427 aa33.47■■■□□ 2.95
SREBF1-214ENST00000486311 ASXL1Q8IXJ9 1541 aa33.47■■■□□ 2.95
SREBF1-214ENST00000486311 PRAG1Q86YV5 1406 aa33.46■■■□□ 2.95
SREBF1-214ENST00000486311 ROBO2Q9HCK4 1378 aa33.45■■■□□ 2.94
SREBF1-214ENST00000486311 SETD1AO15047 1707 aaKnown RBP33.44■■■□□ 2.94
SREBF1-214ENST00000486311 LRP6O75581 1613 aa33.42■■■□□ 2.94
SREBF1-214ENST00000486311 ACIN1Q9UKV3 1341 aaKnown RBP33.42■■■□□ 2.94
SREBF1-214ENST00000486311 SPATA31E1Q6ZUB1 1445 aa33.42■■■□□ 2.94
SREBF1-214ENST00000486311 PPLO60437 1756 aa33.41■■■□□ 2.94
SREBF1-214ENST00000486311 NALCNQ8IZF0 1738 aa33.39■■■□□ 2.94
SREBF1-214ENST00000486311 SETD5Q9C0A6 1442 aa33.38■■■□□ 2.93
SREBF1-214ENST00000486311 ADGRF5Q8IZF2 1346 aa33.38■■■□□ 2.93
SREBF1-214ENST00000486311 SHPRHQ149N8 1683 aa33.38■■■□□ 2.93
SREBF1-214ENST00000486311 RGL3Q3MIN7 710 aa33.37■■■□□ 2.93
SREBF1-214ENST00000486311 ANKRD30BQ9BXX2 1392 aa33.35■■■□□ 2.93
SREBF1-214ENST00000486311 MEX3CQ5U5Q3 659 aaKnown RBP33.35■■■□□ 2.93
SREBF1-214ENST00000486311 C1orf167Q5SNV9 1468 aa33.35■■■□□ 2.93
SREBF1-214ENST00000486311 LRRC59Q96AG4 307 aaKnown RBP33.33■■■□□ 2.93
SREBF1-214ENST00000486311 NHSL1Q5SYE7 1610 aa33.32■■■□□ 2.92
SREBF1-214ENST00000486311 DDX17Q92841 729 aaKnown RBP33.3■■■□□ 2.92
SREBF1-214ENST00000486311 ZNF772Q68DY9 489 aaPredicted RBP33.28■■■□□ 2.92
SREBF1-214ENST00000486311 NUTM2BA6NNL0 878 aaPredicted RBP33.27■■■□□ 2.92
SREBF1-214ENST00000486311 NUTM2EB1AL46 878 aaPredicted RBP33.27■■■□□ 2.92
SREBF1-214ENST00000486311 NUTM2AQ8IVF1 878 aaPredicted RBP33.27■■■□□ 2.92
SREBF1-214ENST00000486311 ORAI2Q96SN7 254 aa33.25■■■□□ 2.91
SREBF1-214ENST00000486311 TECPR2O15040 1411 aa33.24■■■□□ 2.91
SREBF1-214ENST00000486311 PIK3C2GO75747 1445 aa33.24■■■□□ 2.91
SREBF1-214ENST00000486311 LRPPRCP42704 1394 aaKnown RBP33.23■■■□□ 2.91
SREBF1-214ENST00000486311 PNPLA6Q8IY17 1366 aa33.23■■■□□ 2.91
SREBF1-214ENST00000486311 RAB3GAP2Q9H2M9 1393 aa33.22■■■□□ 2.91
SREBF1-214ENST00000486311 IFT172Q9UG01 1749 aa33.22■■■□□ 2.91
SREBF1-214ENST00000486311 STK26Q9P289 416 aa33.21■■■□□ 2.91
SREBF1-214ENST00000486311 ABCC11Q96J66 1382 aa33.21■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms