RNA–Protein interactions for RNA: ENST00000485952.1

SPTLC3-206, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 3

Gene SPTLC3, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-206ENST00000485952 PCMTD1Q96MG8 357 aaPredicted RBP8.88□□□□□ -0.99
SPTLC3-206ENST00000485952 DDX11L8A8MPP1 907 aa8.87□□□□□ -0.99
SPTLC3-206ENST00000485952 SLC4A3P48751 1232 aa8.87□□□□□ -0.99
SPTLC3-206ENST00000485952 RSPH4AQ5TD94 716 aa8.87□□□□□ -0.99
SPTLC3-206ENST00000485952 NBPF3Q9H094 633 aa8.87□□□□□ -0.99
SPTLC3-206ENST00000485952 VPS9D1Q9Y2B5 631 aa8.87□□□□□ -0.99
SPTLC3-206ENST00000485952 CD46P15529 392 aa8.85□□□□□ -0.99
SPTLC3-206ENST00000485952 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-206ENST00000485952 FAM98CQ17RN3 349 aaKnown RBP8.85□□□□□ -0.99
SPTLC3-206ENST00000485952 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-206ENST00000485952 ATP1B4Q9UN42 357 aaPredicted RBP8.85□□□□□ -0.99
SPTLC3-206ENST00000485952 TK2O00142 265 aa8.84□□□□□ -0.99
SPTLC3-206ENST00000485952 LAPTM4BQ86VI4 370 aa8.84□□□□□ -0.99
SPTLC3-206ENST00000485952 RDH13Q8NBN7 331 aa8.84□□□□□ -0.99
SPTLC3-206ENST00000485952 SUPT5HO00267 1087 aaKnown RBP8.83□□□□□ -1
SPTLC3-206ENST00000485952 TBC1D2Q9BYX2 928 aa8.83□□□□□ -1
SPTLC3-206ENST00000485952 SWT1Q5T5J6 900 aaKnown RBP8.82□□□□□ -1
SPTLC3-206ENST00000485952 NUTM1Q86Y26 1132 aa8.82□□□□□ -1
SPTLC3-206ENST00000485952 POTEB3A0JP26 581 aa8.81□□□□□ -1
SPTLC3-206ENST00000485952 LSM11P83369 360 aaKnown RBP eCLIP8.81□□□□□ -1
SPTLC3-206ENST00000485952 MYSM1Q5VVJ2 828 aa8.81□□□□□ -1
SPTLC3-206ENST00000485952 POTEBQ6S5H4 581 aa8.81□□□□□ -1
SPTLC3-206ENST00000485952 MRPL50Q8N5N7 158 aaKnown RBP8.81□□□□□ -1
SPTLC3-206ENST00000485952 POLR3EQ9NVU0 708 aa8.81□□□□□ -1
SPTLC3-206ENST00000485952 SLF2Q8IX21 1173 aa8.8□□□□□ -1
SPTLC3-206ENST00000485952 STAC3Q96MF2 364 aa8.8□□□□□ -1
SPTLC3-206ENST00000485952 BHMG1C9JSJ3 638 aaPredicted RBP8.79□□□□□ -1
SPTLC3-206ENST00000485952 CLK2P49760 499 aaKnown RBP8.79□□□□□ -1
SPTLC3-206ENST00000485952 LCE2DQ5TA82 110 aaPredicted RBP8.79□□□□□ -1
SPTLC3-206ENST00000485952 ADGRD1Q6QNK2 874 aa8.79□□□□□ -1
SPTLC3-206ENST00000485952 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
SPTLC3-206ENST00000485952 ZMYND15Q9H091 742 aa8.79□□□□□ -1
SPTLC3-206ENST00000485952 KDM4AO75164 1064 aa8.77□□□□□ -1.01
SPTLC3-206ENST00000485952 SAMD7Q7Z3H4 446 aa8.77□□□□□ -1.01
SPTLC3-206ENST00000485952 RIC3Q7Z5B4 369 aa8.77□□□□□ -1.01
SPTLC3-206ENST00000485952 NECTIN2Q92692 538 aa8.77□□□□□ -1.01
SPTLC3-206ENST00000485952 ZFRQ96KR1 1074 aaKnown RBP8.77□□□□□ -1.01
SPTLC3-206ENST00000485952 RNF40O75150 1001 aa8.76□□□□□ -1.01
SPTLC3-206ENST00000485952 GCGRP47871 477 aa8.76□□□□□ -1.01
SPTLC3-206ENST00000485952 USP46P62068 366 aa8.76□□□□□ -1.01
SPTLC3-206ENST00000485952 FLIIQ13045 1269 aa8.76□□□□□ -1.01
SPTLC3-206ENST00000485952 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
SPTLC3-206ENST00000485952 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
SPTLC3-206ENST00000485952 HOMEZQ8IX15 550 aa8.75□□□□□ -1.01
SPTLC3-206ENST00000485952 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
SPTLC3-206ENST00000485952 SLC10A3P09131 477 aa8.74□□□□□ -1.01
SPTLC3-206ENST00000485952 GJA5P36382 358 aa8.74□□□□□ -1.01
SPTLC3-206ENST00000485952 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
SPTLC3-206ENST00000485952 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
SPTLC3-206ENST00000485952 SPTLC1O15269 473 aa8.73□□□□□ -1.01
SPTLC3-206ENST00000485952 HRO43593 1189 aa8.73□□□□□ -1.01
SPTLC3-206ENST00000485952 TUSC1Q2TAM9 212 aa8.73□□□□□ -1.01
SPTLC3-206ENST00000485952 RSBN1LQ6PCB5 846 aaPredicted RBP8.73□□□□□ -1.01
SPTLC3-206ENST00000485952 MOXD2PA6NHM9 499 aa8.72□□□□□ -1.01
SPTLC3-206ENST00000485952 GRIPAP1Q4V328 841 aa8.72□□□□□ -1.01
SPTLC3-206ENST00000485952 ANKK1Q8NFD2 765 aa8.72□□□□□ -1.01
SPTLC3-206ENST00000485952 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.72□□□□□ -1.01
SPTLC3-206ENST00000485952 LIMD1Q9UGP4 676 aa8.72□□□□□ -1.01
SPTLC3-206ENST00000485952 CFHP08603 1231 aa8.71□□□□□ -1.02
SPTLC3-206ENST00000485952 KMT5BQ4FZB7 885 aa8.71□□□□□ -1.02
SPTLC3-206ENST00000485952 HOXA2O43364 376 aa8.7□□□□□ -1.02
SPTLC3-206ENST00000485952 NDUFV2P19404 249 aa8.7□□□□□ -1.02
SPTLC3-206ENST00000485952 CSPP1Q1MSJ5 1256 aa8.7□□□□□ -1.02
SPTLC3-206ENST00000485952 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
SPTLC3-206ENST00000485952 FDX1P10109 184 aa8.68□□□□□ -1.02
SPTLC3-206ENST00000485952 RFC5P40937 340 aa8.68□□□□□ -1.02
SPTLC3-206ENST00000485952 PPP2R2DQ66LE6 453 aa8.68□□□□□ -1.02
SPTLC3-206ENST00000485952 NUTM2BA6NNL0 878 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 NUTM2EB1AL46 878 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 ATP6V1AP38606 617 aa8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 TMEM259Q4ZIN3 620 aa8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 NUTM2DQ5VT03 806 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 NUTM2AQ8IVF1 878 aaPredicted RBP8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 ZBTB3Q9H5J0 574 aa8.67□□□□□ -1.02
SPTLC3-206ENST00000485952 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
SPTLC3-206ENST00000485952 FUT2Q10981 343 aa8.66□□□□□ -1.02
SPTLC3-206ENST00000485952 WNT2BQ93097 391 aa8.66□□□□□ -1.02
SPTLC3-206ENST00000485952 LILRB3O75022 631 aa8.65□□□□□ -1.02
SPTLC3-206ENST00000485952 PPP4CP60510 307 aa8.65□□□□□ -1.02
SPTLC3-206ENST00000485952 BANK1Q8NDB2 785 aa8.65□□□□□ -1.02
SPTLC3-206ENST00000485952 PCDHB15Q9Y5E8 787 aa8.65□□□□□ -1.02
SPTLC3-206ENST00000485952 MCM6Q14566 821 aa8.64□□□□□ -1.03
SPTLC3-206ENST00000485952 QPCTQ16769 361 aa8.64□□□□□ -1.03
SPTLC3-206ENST00000485952 TSR3Q9UJK0 312 aaKnown RBP8.64□□□□□ -1.03
SPTLC3-206ENST00000485952 HPS5Q9UPZ3 1129 aa8.64□□□□□ -1.03
SPTLC3-206ENST00000485952 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-206ENST00000485952 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
SPTLC3-206ENST00000485952 GUCA2AQ02747 115 aa8.63□□□□□ -1.03
SPTLC3-206ENST00000485952 MTMR2Q13614 643 aa8.63□□□□□ -1.03
SPTLC3-206ENST00000485952 KRTAP3-3Q9BYR6 98 aa8.63□□□□□ -1.03
SPTLC3-206ENST00000485952 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
SPTLC3-206ENST00000485952 SPDYE5A6NIY4 337 aa8.62□□□□□ -1.03
SPTLC3-206ENST00000485952 HRCP23327 699 aa8.62□□□□□ -1.03
SPTLC3-206ENST00000485952 BCAMP50895 628 aa8.62□□□□□ -1.03
SPTLC3-206ENST00000485952 CABLES1Q8TDN4 633 aa8.62□□□□□ -1.03
SPTLC3-206ENST00000485952 HLA-CQ95604 372 aa8.62□□□□□ -1.03
SPTLC3-206ENST00000485952 PCDHGC3Q9UN70 934 aa8.62□□□□□ -1.03
SPTLC3-206ENST00000485952 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
SPTLC3-206ENST00000485952 AP1G2O75843 785 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms