RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 NCOA3Q9Y6Q9 1424 aa18.18■□□□□ 0.5
HLA-DOA-204ENST00000485901 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
HLA-DOA-204ENST00000485901 RGS17Q9UGC6 210 aaPredicted RBP18.16■□□□□ 0.5
HLA-DOA-204ENST00000485901 ROCK1Q13464 1354 aa18.16■□□□□ 0.5
HLA-DOA-204ENST00000485901 MSH6P52701 1360 aa18.15■□□□□ 0.5
HLA-DOA-204ENST00000485901 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
HLA-DOA-204ENST00000485901 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
HLA-DOA-204ENST00000485901 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.5
HLA-DOA-204ENST00000485901 SLC26A8Q96RN1 970 aa18.14■□□□□ 0.49
HLA-DOA-204ENST00000485901 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
HLA-DOA-204ENST00000485901 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
HLA-DOA-204ENST00000485901 ZFYVE9O95405 1425 aa18.13■□□□□ 0.49
HLA-DOA-204ENST00000485901 TBX22Q9Y458 520 aa18.12■□□□□ 0.49
HLA-DOA-204ENST00000485901 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
HLA-DOA-204ENST00000485901 PIK3R4Q99570 1358 aa18.11■□□□□ 0.49
HLA-DOA-204ENST00000485901 GCC2Q8IWJ2 1684 aa18.1■□□□□ 0.49
HLA-DOA-204ENST00000485901 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
HLA-DOA-204ENST00000485901 TMEM131LA2VDJ0 1609 aa18.08■□□□□ 0.48
HLA-DOA-204ENST00000485901 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
HLA-DOA-204ENST00000485901 JCADQ9P266 1359 aa18.07■□□□□ 0.48
HLA-DOA-204ENST00000485901 BCANQ96GW7 911 aa18.07■□□□□ 0.48
HLA-DOA-204ENST00000485901 DIP2AQ14689 1571 aa18.07■□□□□ 0.48
HLA-DOA-204ENST00000485901 MYO5BQ9ULV0 1848 aa18.07■□□□□ 0.48
HLA-DOA-204ENST00000485901 UNC13BO14795 1591 aa18.05■□□□□ 0.48
HLA-DOA-204ENST00000485901 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
HLA-DOA-204ENST00000485901 PHLPP1O60346 1717 aa18.04■□□□□ 0.48
HLA-DOA-204ENST00000485901 POTEAQ6S8J7 498 aa18.03■□□□□ 0.48
HLA-DOA-204ENST00000485901 CADPS2Q86UW7 1296 aa18.03■□□□□ 0.48
HLA-DOA-204ENST00000485901 SPATA31A6Q5VVP1 1343 aa18.02■□□□□ 0.48
HLA-DOA-204ENST00000485901 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
HLA-DOA-204ENST00000485901 IQGAP3Q86VI3 1631 aa18■□□□□ 0.47
HLA-DOA-204ENST00000485901 ADAMTS13Q76LX8 1427 aa17.99■□□□□ 0.47
HLA-DOA-204ENST00000485901 E9PCH4 1651 aa17.99■□□□□ 0.47
HLA-DOA-204ENST00000485901 COL16A1Q07092 1604 aaPredicted RBP17.98■□□□□ 0.47
HLA-DOA-204ENST00000485901 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
HLA-DOA-204ENST00000485901 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
HLA-DOA-204ENST00000485901 DCCP43146 1447 aa17.98■□□□□ 0.47
HLA-DOA-204ENST00000485901 ATF3P18847 181 aa17.97■□□□□ 0.47
HLA-DOA-204ENST00000485901 TRPM2O94759 1503 aa17.97■□□□□ 0.47
HLA-DOA-204ENST00000485901 NAIPQ13075 1403 aa17.97■□□□□ 0.47
HLA-DOA-204ENST00000485901 NUP155O75694 1391 aa17.96■□□□□ 0.47
HLA-DOA-204ENST00000485901 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.96■□□□□ 0.47
HLA-DOA-204ENST00000485901 ZNF772Q68DY9 489 aaPredicted RBP17.96■□□□□ 0.47
HLA-DOA-204ENST00000485901 HFM1A2PYH4 1435 aa17.95■□□□□ 0.46
HLA-DOA-204ENST00000485901 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
HLA-DOA-204ENST00000485901 CHGAP10645 457 aaKnown RBP17.94■□□□□ 0.46
HLA-DOA-204ENST00000485901 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
HLA-DOA-204ENST00000485901 AMOTL2Q9Y2J4 779 aa17.92■□□□□ 0.46
HLA-DOA-204ENST00000485901 TRIM52Q96A61 297 aa17.9■□□□□ 0.46
HLA-DOA-204ENST00000485901 SETBP1Q9Y6X0 1596 aa17.9■□□□□ 0.46
HLA-DOA-204ENST00000485901 BRINP3Q76B58 766 aa17.87■□□□□ 0.45
HLA-DOA-204ENST00000485901 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
HLA-DOA-204ENST00000485901 SETD5Q9C0A6 1442 aa17.87■□□□□ 0.45
HLA-DOA-204ENST00000485901 CDK12Q9NYV4 1490 aaPredicted RBP17.87■□□□□ 0.45
HLA-DOA-204ENST00000485901 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
HLA-DOA-204ENST00000485901 MEX3CQ5U5Q3 659 aaKnown RBP17.86■□□□□ 0.45
HLA-DOA-204ENST00000485901 PTPRUQ92729 1446 aa17.86■□□□□ 0.45
HLA-DOA-204ENST00000485901 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
HLA-DOA-204ENST00000485901 LRP6O75581 1613 aa17.85■□□□□ 0.45
HLA-DOA-204ENST00000485901 LRRC59Q96AG4 307 aaKnown RBP17.84■□□□□ 0.45
HLA-DOA-204ENST00000485901 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
HLA-DOA-204ENST00000485901 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
HLA-DOA-204ENST00000485901 RXRBP28702 533 aa17.82■□□□□ 0.44
HLA-DOA-204ENST00000485901 SLC4A1APQ9BWU0 796 aaKnown RBP17.82■□□□□ 0.44
HLA-DOA-204ENST00000485901 NHSL1Q5SYE7 1610 aa17.82■□□□□ 0.44
HLA-DOA-204ENST00000485901 MST1RQ04912 1400 aa17.81■□□□□ 0.44
HLA-DOA-204ENST00000485901 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
HLA-DOA-204ENST00000485901 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.44
HLA-DOA-204ENST00000485901 SETD1AO15047 1707 aaKnown RBP17.8■□□□□ 0.44
HLA-DOA-204ENST00000485901 ADGRL3Q9HAR2 1447 aa17.8■□□□□ 0.44
HLA-DOA-204ENST00000485901 KIF1BO60333 1816 aa17.78■□□□□ 0.44
HLA-DOA-204ENST00000485901 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
HLA-DOA-204ENST00000485901 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
HLA-DOA-204ENST00000485901 METP08581 1390 aa17.77■□□□□ 0.43
HLA-DOA-204ENST00000485901 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
HLA-DOA-204ENST00000485901 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
HLA-DOA-204ENST00000485901 LAMC1P11047 1609 aa17.76■□□□□ 0.43
HLA-DOA-204ENST00000485901 RPGRIP1LQ68CZ1 1315 aa17.75■□□□□ 0.43
HLA-DOA-204ENST00000485901 HRCP23327 699 aa17.75■□□□□ 0.43
HLA-DOA-204ENST00000485901 NEXMIFQ5QGS0 1516 aa17.75■□□□□ 0.43
HLA-DOA-204ENST00000485901 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
HLA-DOA-204ENST00000485901 RAB3GAP2Q9H2M9 1393 aa17.74■□□□□ 0.43
HLA-DOA-204ENST00000485901 AFF2P51816 1311 aa17.73■□□□□ 0.43
HLA-DOA-204ENST00000485901 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
HLA-DOA-204ENST00000485901 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
HLA-DOA-204ENST00000485901 PNPLA6Q8IY17 1366 aa17.71■□□□□ 0.43
HLA-DOA-204ENST00000485901 NUTM2BA6NNL0 878 aaPredicted RBP17.71■□□□□ 0.43
HLA-DOA-204ENST00000485901 NUTM2EB1AL46 878 aaPredicted RBP17.71■□□□□ 0.43
HLA-DOA-204ENST00000485901 NUTM2AQ8IVF1 878 aaPredicted RBP17.71■□□□□ 0.43
HLA-DOA-204ENST00000485901 NALCNQ8IZF0 1738 aa17.7■□□□□ 0.42
HLA-DOA-204ENST00000485901 SOS2Q07890 1332 aaPredicted RBP17.7■□□□□ 0.42
HLA-DOA-204ENST00000485901 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
HLA-DOA-204ENST00000485901 FOXD1Q16676 465 aa17.69■□□□□ 0.42
HLA-DOA-204ENST00000485901 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
HLA-DOA-204ENST00000485901 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
HLA-DOA-204ENST00000485901 C8orf37Q96NL8 207 aa17.65■□□□□ 0.42
HLA-DOA-204ENST00000485901 TRIM26Q12899 539 aaPredicted RBP17.63■□□□□ 0.41
HLA-DOA-204ENST00000485901 FNBP4Q8N3X1 1017 aaPredicted RBP17.63■□□□□ 0.41
HLA-DOA-204ENST00000485901 TRPC5Q9UL62 973 aaPredicted RBP17.62■□□□□ 0.41
HLA-DOA-204ENST00000485901 ROBO2Q9HCK4 1378 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms