RNA–Protein interactions for RNA: ENST00000485804.5

SPIN1-206, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-206ENST00000485804 MYO5BQ9ULV0 1848 aa29.18■■■□□ 2.26
SPIN1-206ENST00000485804 CHGAP10645 457 aaKnown RBP29.18■■■□□ 2.26
SPIN1-206ENST00000485804 HDGFP51858 240 aaKnown RBP29.17■■■□□ 2.26
SPIN1-206ENST00000485804 ROBO1Q9Y6N7 1651 aa29.17■■■□□ 2.26
SPIN1-206ENST00000485804 RPRD2Q5VT52 1461 aaKnown RBP29.16■■■□□ 2.26
SPIN1-206ENST00000485804 MSH6P52701 1360 aa29.15■■■□□ 2.26
SPIN1-206ENST00000485804 GCC2Q8IWJ2 1684 aa29.15■■■□□ 2.26
SPIN1-206ENST00000485804 RGS17Q9UGC6 210 aaPredicted RBP29.14■■■□□ 2.26
SPIN1-206ENST00000485804 NKTRP30414 1462 aaKnown RBP29.14■■■□□ 2.26
SPIN1-206ENST00000485804 RIMS2Q9UQ26 1411 aa29.11■■■□□ 2.25
SPIN1-206ENST00000485804 NWD1Q149M9 1564 aa29.11■■■□□ 2.25
SPIN1-206ENST00000485804 PLEKHG1Q9ULL1 1385 aa29.09■■■□□ 2.25
SPIN1-206ENST00000485804 C14orf37Q86TY3 774 aa29.08■■■□□ 2.25
SPIN1-206ENST00000485804 SLAIN2Q9P270 581 aa29.07■■■□□ 2.24
SPIN1-206ENST00000485804 CHD2O14647 1828 aaKnown RBP29.06■■■□□ 2.24
SPIN1-206ENST00000485804 ZFYVE9O95405 1425 aa29.06■■■□□ 2.24
SPIN1-206ENST00000485804 NUTM2DQ5VT03 806 aaPredicted RBP29.06■■■□□ 2.24
SPIN1-206ENST00000485804 TMEM131LA2VDJ0 1609 aa29.05■■■□□ 2.24
SPIN1-206ENST00000485804 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.05■■■□□ 2.24
SPIN1-206ENST00000485804 PHLPP1O60346 1717 aa29.05■■■□□ 2.24
SPIN1-206ENST00000485804 UNC13BO14795 1591 aa29.02■■■□□ 2.24
SPIN1-206ENST00000485804 ITGAEP38570 1179 aa29.02■■■□□ 2.24
SPIN1-206ENST00000485804 POTEAQ6S8J7 498 aa29.01■■■□□ 2.23
SPIN1-206ENST00000485804 E9PCH4 1651 aa29■■■□□ 2.23
SPIN1-206ENST00000485804 TBX22Q9Y458 520 aa29■■■□□ 2.23
SPIN1-206ENST00000485804 JCADQ9P266 1359 aa28.95■■■□□ 2.22
SPIN1-206ENST00000485804 ROCK1Q13464 1354 aa28.94■■■□□ 2.22
SPIN1-206ENST00000485804 NUP155O75694 1391 aa28.93■■■□□ 2.22
SPIN1-206ENST00000485804 IQGAP3Q86VI3 1631 aa28.93■■■□□ 2.22
SPIN1-206ENST00000485804 ATF3P18847 181 aa28.92■■■□□ 2.22
SPIN1-206ENST00000485804 CADPS2Q86UW7 1296 aa28.9■■■□□ 2.22
SPIN1-206ENST00000485804 DIP2AQ14689 1571 aa28.89■■■□□ 2.22
SPIN1-206ENST00000485804 ADAMTS13Q76LX8 1427 aa28.89■■■□□ 2.22
SPIN1-206ENST00000485804 NCOA3Q9Y6Q9 1424 aa28.89■■■□□ 2.22
SPIN1-206ENST00000485804 MEX3CQ5U5Q3 659 aaKnown RBP28.89■■■□□ 2.22
SPIN1-206ENST00000485804 PPARGC1BQ86YN6 1023 aaKnown RBP28.88■■■□□ 2.21
SPIN1-206ENST00000485804 C19orf44Q9H6X5 657 aa28.88■■■□□ 2.21
SPIN1-206ENST00000485804 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.88■■■□□ 2.21
SPIN1-206ENST00000485804 AMOTL2Q9Y2J4 779 aa28.86■■■□□ 2.21
SPIN1-206ENST00000485804 PIK3R4Q99570 1358 aa28.86■■■□□ 2.21
SPIN1-206ENST00000485804 TRPM2O94759 1503 aa28.85■■■□□ 2.21
SPIN1-206ENST00000485804 COL16A1Q07092 1604 aaPredicted RBP28.85■■■□□ 2.21
SPIN1-206ENST00000485804 ZNF326Q5BKZ1 582 aaKnown RBP28.84■■■□□ 2.21
SPIN1-206ENST00000485804 SETD1AO15047 1707 aaKnown RBP28.8■■■□□ 2.2
SPIN1-206ENST00000485804 SPATA31A6Q5VVP1 1343 aa28.8■■■□□ 2.2
SPIN1-206ENST00000485804 SPHKAPQ2M3C7 1700 aa28.77■■■□□ 2.2
SPIN1-206ENST00000485804 PTPRUQ92729 1446 aa28.77■■■□□ 2.2
SPIN1-206ENST00000485804 AHDC1Q5TGY3 1603 aaPredicted RBP28.75■■■□□ 2.19
SPIN1-206ENST00000485804 LRP6O75581 1613 aa28.74■■■□□ 2.19
SPIN1-206ENST00000485804 NUTM2BA6NNL0 878 aaPredicted RBP28.74■■■□□ 2.19
SPIN1-206ENST00000485804 NUTM2EB1AL46 878 aaPredicted RBP28.74■■■□□ 2.19
SPIN1-206ENST00000485804 NUTM2AQ8IVF1 878 aaPredicted RBP28.74■■■□□ 2.19
SPIN1-206ENST00000485804 ZNF772Q68DY9 489 aaPredicted RBP28.73■■■□□ 2.19
SPIN1-206ENST00000485804 BRINP3Q76B58 766 aa28.73■■■□□ 2.19
SPIN1-206ENST00000485804 SHPRHQ149N8 1683 aa28.72■■■□□ 2.19
SPIN1-206ENST00000485804 RRBP1Q9P2E9 1410 aaKnown RBP28.71■■■□□ 2.19
SPIN1-206ENST00000485804 TRIM52Q96A61 297 aa28.71■■■□□ 2.19
SPIN1-206ENST00000485804 NRXN3Q9Y4C0 1643 aa28.69■■■□□ 2.18
SPIN1-206ENST00000485804 SETBP1Q9Y6X0 1596 aa28.67■■■□□ 2.18
SPIN1-206ENST00000485804 XRN1Q8IZH2 1706 aaKnown RBP28.66■■■□□ 2.18
SPIN1-206ENST00000485804 DCCP43146 1447 aa28.66■■■□□ 2.18
SPIN1-206ENST00000485804 METP08581 1390 aa28.65■■■□□ 2.18
SPIN1-206ENST00000485804 ASXL1Q8IXJ9 1541 aa28.64■■■□□ 2.17
SPIN1-206ENST00000485804 KIF1BO60333 1816 aa28.62■■■□□ 2.17
SPIN1-206ENST00000485804 CLTCL1P53675 1640 aa28.61■■■□□ 2.17
SPIN1-206ENST00000485804 RXRBP28702 533 aa28.61■■■□□ 2.17
SPIN1-206ENST00000485804 MST1RQ04912 1400 aa28.6■■■□□ 2.17
SPIN1-206ENST00000485804 LRRC59Q96AG4 307 aaKnown RBP28.59■■■□□ 2.17
SPIN1-206ENST00000485804 NEXMIFQ5QGS0 1516 aa28.58■■■□□ 2.17
SPIN1-206ENST00000485804 DDX17Q92841 729 aaKnown RBP28.57■■■□□ 2.16
SPIN1-206ENST00000485804 AFF2P51816 1311 aa28.56■■■□□ 2.16
SPIN1-206ENST00000485804 NHSL1Q5SYE7 1610 aa28.56■■■□□ 2.16
SPIN1-206ENST00000485804 SETD5Q9C0A6 1442 aa28.55■■■□□ 2.16
SPIN1-206ENST00000485804 ADGRL3Q9HAR2 1447 aa28.55■■■□□ 2.16
SPIN1-206ENST00000485804 UPF1Q92900 1129 aaKnown RBP eCLIP28.54■■■□□ 2.16
SPIN1-206ENST00000485804 NALCNQ8IZF0 1738 aa28.54■■■□□ 2.16
SPIN1-206ENST00000485804 C8orf37Q96NL8 207 aa28.53■■■□□ 2.16
SPIN1-206ENST00000485804 NAIPQ13075 1403 aa28.51■■■□□ 2.15
SPIN1-206ENST00000485804 VGFO15240 615 aaPredicted RBP28.5■■■□□ 2.15
SPIN1-206ENST00000485804 PNPLA6Q8IY17 1366 aa28.47■■■□□ 2.15
SPIN1-206ENST00000485804 ADAMTS2O95450 1211 aa28.45■■■□□ 2.14
SPIN1-206ENST00000485804 SLC4A1APQ9BWU0 796 aaKnown RBP28.45■■■□□ 2.14
SPIN1-206ENST00000485804 QTRT2Q9H974 415 aaKnown RBP28.45■■■□□ 2.14
SPIN1-206ENST00000485804 C1orf167Q5SNV9 1468 aa28.45■■■□□ 2.14
SPIN1-206ENST00000485804 HFM1A2PYH4 1435 aa28.44■■■□□ 2.14
SPIN1-206ENST00000485804 NGLY1Q96IV0 654 aa28.43■■■□□ 2.14
SPIN1-206ENST00000485804 CDK12Q9NYV4 1490 aaPredicted RBP28.42■■■□□ 2.14
SPIN1-206ENST00000485804 ORAI2Q96SN7 254 aa28.41■■■□□ 2.14
SPIN1-206ENST00000485804 ROBO2Q9HCK4 1378 aa28.4■■■□□ 2.14
SPIN1-206ENST00000485804 RBM6P78332 1123 aaKnown RBP28.4■■■□□ 2.14
SPIN1-206ENST00000485804 PTCH1Q13635 1447 aa28.4■■■□□ 2.14
SPIN1-206ENST00000485804 RPGRIP1LQ68CZ1 1315 aa28.4■■■□□ 2.14
SPIN1-206ENST00000485804 PPLO60437 1756 aa28.35■■■□□ 2.13
SPIN1-206ENST00000485804 RGS12O14924 1447 aa28.34■■■□□ 2.13
SPIN1-206ENST00000485804 FOXD1Q16676 465 aa28.32■■■□□ 2.12
SPIN1-206ENST00000485804 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
SPIN1-206ENST00000485804 ESCO1Q5FWF5 840 aa28.31■■■□□ 2.12
SPIN1-206ENST00000485804 USP21Q9UK80 565 aa28.31■■■□□ 2.12
SPIN1-206ENST00000485804 LAMC1P11047 1609 aa28.29■■■□□ 2.12
SPIN1-206ENST00000485804 RGL3Q3MIN7 710 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms