RNA–Protein interactions for RNA: ENST00000485781.5

MDH1-213, Transcript of malate dehydrogenase 1, humanhuman

TSL 2

Gene MDH1, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-213ENST00000485781 LMTK2Q8IWU2 1503 aa18.03■□□□□ 0.48
MDH1-213ENST00000485781 PPP1R15AO75807 674 aaPredicted RBP18.03■□□□□ 0.48
MDH1-213ENST00000485781 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
MDH1-213ENST00000485781 HDGFP51858 240 aaKnown RBP18.02■□□□□ 0.48
MDH1-213ENST00000485781 NWD1Q149M9 1564 aa18.02■□□□□ 0.48
MDH1-213ENST00000485781 C14orf37Q86TY3 774 aa18.02■□□□□ 0.48
MDH1-213ENST00000485781 NOS1P29475 1434 aa18.01■□□□□ 0.47
MDH1-213ENST00000485781 MEX3CQ5U5Q3 659 aaKnown RBP18.01■□□□□ 0.47
MDH1-213ENST00000485781 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
MDH1-213ENST00000485781 FGD6Q6ZV73 1430 aa17.98■□□□□ 0.47
MDH1-213ENST00000485781 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
MDH1-213ENST00000485781 ZNF772Q68DY9 489 aaPredicted RBP17.96■□□□□ 0.47
MDH1-213ENST00000485781 RIMS2Q9UQ26 1411 aa17.96■□□□□ 0.47
MDH1-213ENST00000485781 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
MDH1-213ENST00000485781 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
MDH1-213ENST00000485781 TRIM52Q96A61 297 aa17.95■□□□□ 0.46
MDH1-213ENST00000485781 CHD2O14647 1828 aaKnown RBP17.93■□□□□ 0.46
MDH1-213ENST00000485781 ZFYVE9O95405 1425 aa17.93■□□□□ 0.46
MDH1-213ENST00000485781 ATF3P18847 181 aa17.93■□□□□ 0.46
MDH1-213ENST00000485781 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
MDH1-213ENST00000485781 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.93■□□□□ 0.46
MDH1-213ENST00000485781 TBX22Q9Y458 520 aa17.93■□□□□ 0.46
MDH1-213ENST00000485781 COL16A1Q07092 1604 aaPredicted RBP17.93■□□□□ 0.46
MDH1-213ENST00000485781 RPRD2Q5VT52 1461 aaKnown RBP17.93■□□□□ 0.46
MDH1-213ENST00000485781 NCOA3Q9Y6Q9 1424 aa17.92■□□□□ 0.46
MDH1-213ENST00000485781 UPF1Q92900 1129 aaKnown RBP eCLIP17.91■□□□□ 0.46
MDH1-213ENST00000485781 GCC2Q8IWJ2 1684 aa17.9■□□□□ 0.46
MDH1-213ENST00000485781 FAM50AQ14320 339 aaKnown RBP17.9■□□□□ 0.46
MDH1-213ENST00000485781 MYO5BQ9ULV0 1848 aa17.9■□□□□ 0.46
MDH1-213ENST00000485781 LRP6O75581 1613 aa17.9■□□□□ 0.46
MDH1-213ENST00000485781 ANKRD50Q9ULJ7 1429 aa17.89■□□□□ 0.46
MDH1-213ENST00000485781 C19orf44Q9H6X5 657 aa17.89■□□□□ 0.45
MDH1-213ENST00000485781 ADGRL2O95490 1459 aa17.88■□□□□ 0.45
MDH1-213ENST00000485781 NUTM2BA6NNL0 878 aaPredicted RBP17.88■□□□□ 0.45
MDH1-213ENST00000485781 NUTM2EB1AL46 878 aaPredicted RBP17.88■□□□□ 0.45
MDH1-213ENST00000485781 RXRBP28702 533 aa17.88■□□□□ 0.45
MDH1-213ENST00000485781 NUTM2DQ5VT03 806 aaPredicted RBP17.88■□□□□ 0.45
MDH1-213ENST00000485781 NUTM2AQ8IVF1 878 aaPredicted RBP17.88■□□□□ 0.45
MDH1-213ENST00000485781 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
MDH1-213ENST00000485781 AHDC1Q5TGY3 1603 aaPredicted RBP17.86■□□□□ 0.45
MDH1-213ENST00000485781 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
MDH1-213ENST00000485781 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.85■□□□□ 0.45
MDH1-213ENST00000485781 SHPRHQ149N8 1683 aa17.84■□□□□ 0.45
MDH1-213ENST00000485781 DIP2AQ14689 1571 aa17.84■□□□□ 0.45
MDH1-213ENST00000485781 ADAMTS13Q76LX8 1427 aa17.83■□□□□ 0.45
MDH1-213ENST00000485781 BRINP3Q76B58 766 aa17.82■□□□□ 0.44
MDH1-213ENST00000485781 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
MDH1-213ENST00000485781 TRPM2O94759 1503 aa17.81■□□□□ 0.44
MDH1-213ENST00000485781 AFF2P51816 1311 aa17.8■□□□□ 0.44
MDH1-213ENST00000485781 CDK12Q9NYV4 1490 aaPredicted RBP17.78■□□□□ 0.44
MDH1-213ENST00000485781 DCCP43146 1447 aa17.77■□□□□ 0.44
MDH1-213ENST00000485781 UNC13BO14795 1591 aa17.76■□□□□ 0.43
MDH1-213ENST00000485781 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
MDH1-213ENST00000485781 E9PCH4 1651 aa17.76■□□□□ 0.43
MDH1-213ENST00000485781 PTPRUQ92729 1446 aa17.75■□□□□ 0.43
MDH1-213ENST00000485781 ASXL1Q8IXJ9 1541 aa17.75■□□□□ 0.43
MDH1-213ENST00000485781 C8orf37Q96NL8 207 aa17.74■□□□□ 0.43
MDH1-213ENST00000485781 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
MDH1-213ENST00000485781 QTRT2Q9H974 415 aaKnown RBP17.73■□□□□ 0.43
MDH1-213ENST00000485781 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
MDH1-213ENST00000485781 ZNF326Q5BKZ1 582 aaKnown RBP17.72■□□□□ 0.43
MDH1-213ENST00000485781 NUP155O75694 1391 aa17.71■□□□□ 0.43
MDH1-213ENST00000485781 MST1RQ04912 1400 aa17.71■□□□□ 0.43
MDH1-213ENST00000485781 IQGAP3Q86VI3 1631 aa17.69■□□□□ 0.42
MDH1-213ENST00000485781 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
MDH1-213ENST00000485781 RGS12O14924 1447 aa17.69■□□□□ 0.42
MDH1-213ENST00000485781 NHSL1Q5SYE7 1610 aa17.69■□□□□ 0.42
MDH1-213ENST00000485781 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
MDH1-213ENST00000485781 DDX17Q92841 729 aaKnown RBP17.68■□□□□ 0.42
MDH1-213ENST00000485781 PNPLA6Q8IY17 1366 aa17.67■□□□□ 0.42
MDH1-213ENST00000485781 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
MDH1-213ENST00000485781 ROCK1Q13464 1354 aa17.66■□□□□ 0.42
MDH1-213ENST00000485781 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
MDH1-213ENST00000485781 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
MDH1-213ENST00000485781 METP08581 1390 aa17.65■□□□□ 0.42
MDH1-213ENST00000485781 ITGAEP38570 1179 aa17.64■□□□□ 0.41
MDH1-213ENST00000485781 FOXD1Q16676 465 aa17.64■□□□□ 0.41
MDH1-213ENST00000485781 NRXN3Q9Y4C0 1643 aa17.64■□□□□ 0.41
MDH1-213ENST00000485781 ATAD2Q6PL18 1390 aa17.63■□□□□ 0.41
MDH1-213ENST00000485781 USP21Q9UK80 565 aa17.61■□□□□ 0.41
MDH1-213ENST00000485781 SPHKAPQ2M3C7 1700 aa17.6■□□□□ 0.41
MDH1-213ENST00000485781 NALCNQ8IZF0 1738 aa17.59■□□□□ 0.41
MDH1-213ENST00000485781 C1orf167Q5SNV9 1468 aa17.59■□□□□ 0.41
MDH1-213ENST00000485781 TRPC5Q9UL62 973 aaPredicted RBP17.59■□□□□ 0.41
MDH1-213ENST00000485781 ZRANB1Q9UGI0 708 aa17.58■□□□□ 0.4
MDH1-213ENST00000485781 ORAI2Q96SN7 254 aa17.56■□□□□ 0.4
MDH1-213ENST00000485781 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
MDH1-213ENST00000485781 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
MDH1-213ENST00000485781 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
MDH1-213ENST00000485781 FNBP4Q8N3X1 1017 aaPredicted RBP17.53■□□□□ 0.4
MDH1-213ENST00000485781 VGFO15240 615 aaPredicted RBP17.52■□□□□ 0.4
MDH1-213ENST00000485781 CLTCL1P53675 1640 aa17.51■□□□□ 0.39
MDH1-213ENST00000485781 LAMC1P11047 1609 aa17.5■□□□□ 0.39
MDH1-213ENST00000485781 ATRNO75882 1429 aa17.5■□□□□ 0.39
MDH1-213ENST00000485781 KIF1BO60333 1816 aa17.5■□□□□ 0.39
MDH1-213ENST00000485781 CCDC125Q86Z20 511 aa17.5■□□□□ 0.39
MDH1-213ENST00000485781 ROBO2Q9HCK4 1378 aa17.5■□□□□ 0.39
MDH1-213ENST00000485781 NPHP3Q7Z494 1330 aa17.49■□□□□ 0.39
MDH1-213ENST00000485781 ESCO1Q5FWF5 840 aa17.49■□□□□ 0.39
MDH1-213ENST00000485781 SRCAPQ6ZRS2 3230 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms