RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 CDHR5Q9HBB8 845 aa6.75□□□□□ -1.33
SMARCC1-206ENST00000485737 KIAA1468Q9P260 1216 aa6.75□□□□□ -1.33
SMARCC1-206ENST00000485737 RABGEF1Q9UJ41 708 aa6.75□□□□□ -1.33
SMARCC1-206ENST00000485737 CUX1P39880 1505 aa6.75□□□□□ -1.33
SMARCC1-206ENST00000485737 KIF27Q86VH2 1401 aa6.75□□□□□ -1.33
SMARCC1-206ENST00000485737 ARHGAP35Q9NRY4 1499 aa6.74□□□□□ -1.33
SMARCC1-206ENST00000485737 BHMG1C9JSJ3 638 aaPredicted RBP6.74□□□□□ -1.33
SMARCC1-206ENST00000485737 SEMA3EO15041 775 aa6.74□□□□□ -1.33
SMARCC1-206ENST00000485737 VSIG10Q8N0Z9 540 aa6.74□□□□□ -1.33
SMARCC1-206ENST00000485737 TIAM1Q13009 1591 aa6.74□□□□□ -1.33
SMARCC1-206ENST00000485737 TRIM6-TRIM34B2RNG4 842 aa6.73□□□□□ -1.33
SMARCC1-206ENST00000485737 WNT2BQ93097 391 aa6.73□□□□□ -1.33
SMARCC1-206ENST00000485737 SEPT9Q9UHD8 586 aaPredicted RBP6.73□□□□□ -1.33
SMARCC1-206ENST00000485737 CFAP43Q8NDM7 1665 aa6.73□□□□□ -1.33
SMARCC1-206ENST00000485737 PTPN5P54829 565 aa6.72□□□□□ -1.33
SMARCC1-206ENST00000485737 PACS2Q86VP3 889 aa6.72□□□□□ -1.33
SMARCC1-206ENST00000485737 PRSS12P56730 875 aa6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 NYAP1Q6ZVC0 841 aa6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 CERKQ8TCT0 537 aa6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 CDCA7LQ96GN5 454 aa6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 IRX2Q9BZI1 471 aaPredicted RBP6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 TSKSQ9UJT2 592 aa6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 NCAPD3P42695 1498 aa6.71□□□□□ -1.34
SMARCC1-206ENST00000485737 NUTM2FA1L443 756 aa6.7□□□□□ -1.34
SMARCC1-206ENST00000485737 KANK4Q5T7N3 995 aaPredicted RBP6.7□□□□□ -1.34
SMARCC1-206ENST00000485737 ANP32EQ9BTT0 268 aa6.7□□□□□ -1.34
SMARCC1-206ENST00000485737 CFTRP13569 1480 aa6.7□□□□□ -1.34
SMARCC1-206ENST00000485737 PRDM2Q13029 1718 aa6.7□□□□□ -1.34
SMARCC1-206ENST00000485737 RAB3GAP2Q9H2M9 1393 aa6.69□□□□□ -1.34
SMARCC1-206ENST00000485737 ONECUT3O60422 494 aaPredicted RBP6.69□□□□□ -1.34
SMARCC1-206ENST00000485737 ANKK1Q8NFD2 765 aa6.69□□□□□ -1.34
SMARCC1-206ENST00000485737 LRRC9Q6ZRR7 1453 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 SMAPO00193 183 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 LAPTM4AQ15012 233 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 PADI6Q6TGC4 694 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 THSD4Q6ZMP0 1018 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 ZFRQ96KR1 1074 aaKnown RBP6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 PNMA3Q9UL41 463 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 TIMELESSQ9UNS1 1208 aa6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMARCC1-206ENST00000485737 SETD5Q9C0A6 1442 aa6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 NBPF26B4DH59 902 aa6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 BCAMP50895 628 aa6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 FAM98CQ17RN3 349 aaKnown RBP6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 SMYD5Q6GMV2 418 aa6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 LAPTM4BQ86VI4 370 aa6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 FAM198AQ9UFP1 575 aa6.67□□□□□ -1.34
SMARCC1-206ENST00000485737 TESPA1A2RU30 521 aaPredicted RBP6.66□□□□□ -1.34
SMARCC1-206ENST00000485737 NPDC1Q9NQX5 325 aaPredicted RBP6.66□□□□□ -1.34
SMARCC1-206ENST00000485737 FHAD1B1AJZ9 1412 aa6.66□□□□□ -1.34
SMARCC1-206ENST00000485737 WDR97A6NE52 1622 aa6.65□□□□□ -1.34
SMARCC1-206ENST00000485737 A0A0G2JS52 829 aa6.65□□□□□ -1.34
SMARCC1-206ENST00000485737 CCER2I3L3R5 266 aa6.65□□□□□ -1.34
SMARCC1-206ENST00000485737 RBM26Q5T8P6 1007 aaKnown RBP6.65□□□□□ -1.34
SMARCC1-206ENST00000485737 NUDT18Q6ZVK8 323 aa6.65□□□□□ -1.34
SMARCC1-206ENST00000485737 TATDN2Q93075 761 aa6.65□□□□□ -1.34
SMARCC1-206ENST00000485737 AQRO60306 1485 aaKnown RBP eCLIP6.65□□□□□ -1.357e-7■■■■■ 27.4
SMARCC1-206ENST00000485737 EFCAB5A4FU69 1503 aa6.65□□□□□ -1.35
SMARCC1-206ENST00000485737 PCF11O94913 1555 aaKnown RBP6.65□□□□□ -1.35
SMARCC1-206ENST00000485737 PTGDRQ13258 359 aa6.64□□□□□ -1.35
SMARCC1-206ENST00000485737 LRCH3Q96II8 777 aa6.64□□□□□ -1.35
SMARCC1-206ENST00000485737 RBM27Q9P2N5 1060 aaKnown RBP6.64□□□□□ -1.35
SMARCC1-206ENST00000485737 FYCO1Q9BQS8 1478 aa6.64□□□□□ -1.35
SMARCC1-206ENST00000485737 SOWAHBA6NEL2 793 aa6.63□□□□□ -1.35
SMARCC1-206ENST00000485737 C3orf80F5H4A9 247 aa6.63□□□□□ -1.35
SMARCC1-206ENST00000485737 RNF40O75150 1001 aa6.63□□□□□ -1.35
SMARCC1-206ENST00000485737 PHLDB1Q86UU1 1377 aa6.63□□□□□ -1.35
SMARCC1-206ENST00000485737 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.63□□□□□ -1.35
SMARCC1-206ENST00000485737 IGF1RP08069 1367 aa6.62□□□□□ -1.35
SMARCC1-206ENST00000485737 PPP1R15AO75807 674 aaPredicted RBP6.62□□□□□ -1.35
SMARCC1-206ENST00000485737 FCHSD2O94868 740 aa6.62□□□□□ -1.35
SMARCC1-206ENST00000485737 HDGFP51858 240 aaKnown RBP6.62□□□□□ -1.35
SMARCC1-206ENST00000485737 FGD5Q6ZNL6 1462 aa6.61□□□□□ -1.35
SMARCC1-206ENST00000485737 TULP1O00294 542 aaPredicted RBP6.61□□□□□ -1.35
SMARCC1-206ENST00000485737 SAMD7Q7Z3H4 446 aa6.61□□□□□ -1.35
SMARCC1-206ENST00000485737 HPS5Q9UPZ3 1129 aa6.61□□□□□ -1.35
SMARCC1-206ENST00000485737 CASKIN1Q8WXD9 1431 aa6.6□□□□□ -1.35
SMARCC1-206ENST00000485737 WBP1LQ9NX94 342 aa6.6□□□□□ -1.35
SMARCC1-206ENST00000485737 CC2D2AQ9P2K1 1620 aa6.59□□□□□ -1.35
SMARCC1-206ENST00000485737 FAM161AQ3B820 660 aa6.59□□□□□ -1.35
SMARCC1-206ENST00000485737 TTC13Q8NBP0 860 aa6.59□□□□□ -1.35
SMARCC1-206ENST00000485737 TSR3Q9UJK0 312 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-206ENST00000485737 THOC2Q8NI27 1593 aaKnown RBP6.59□□□□□ -1.35
SMARCC1-206ENST00000485737 KDM5BQ9UGL1 1544 aa6.59□□□□□ -1.35
SMARCC1-206ENST00000485737 CARMIL1Q5VZK9 1371 aa6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 NEFLP07196 543 aa6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 RANGAP1P46060 587 aaPredicted RBP6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 PPP4CP60510 307 aa6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 GPIHBP1Q8IV16 184 aa6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 HFM1A2PYH4 1435 aa6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 UACAQ9BZF9 1416 aa6.58□□□□□ -1.36
SMARCC1-206ENST00000485737 ITGBL1O95965 494 aaPredicted RBP6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 HIC1Q14526 733 aa6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 SWT1Q5T5J6 900 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 RBM46Q8TBY0 533 aaKnown RBP6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 BCL11AQ9H165 835 aa6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 SNAPC4Q5SXM2 1469 aa6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 CCDC18Q5T9S5 1454 aa6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 CUL7Q14999 1698 aa6.57□□□□□ -1.36
SMARCC1-206ENST00000485737 FGD6Q6ZV73 1430 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms