RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
RPUSD3-217ENST00000485705 NUTM2DQ5VT03 806 aaPredicted RBP22.63■■□□□ 1.21
RPUSD3-217ENST00000485705 NEURL4Q96JN8 1562 aa22.63■■□□□ 1.21
RPUSD3-217ENST00000485705 SCAF11Q99590 1463 aaKnown RBP22.62■■□□□ 1.21
RPUSD3-217ENST00000485705 SIN3AQ96ST3 1273 aa22.62■■□□□ 1.21
RPUSD3-217ENST00000485705 EID1Q9Y6B2 187 aa22.6■■□□□ 1.21
RPUSD3-217ENST00000485705 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
RPUSD3-217ENST00000485705 SENP3Q9H4L4 574 aaPredicted RBP22.59■■□□□ 1.21
RPUSD3-217ENST00000485705 PPLO60437 1756 aa22.57■■□□□ 1.2
RPUSD3-217ENST00000485705 MED14O60244 1454 aa22.56■■□□□ 1.2
RPUSD3-217ENST00000485705 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-217ENST00000485705 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
RPUSD3-217ENST00000485705 NEUROD1Q13562 356 aa22.55■■□□□ 1.2
RPUSD3-217ENST00000485705 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
RPUSD3-217ENST00000485705 IQGAP1P46940 1657 aa22.55■■□□□ 1.2
RPUSD3-217ENST00000485705 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
RPUSD3-217ENST00000485705 HDGFP51858 240 aaKnown RBP22.54■■□□□ 1.2
RPUSD3-217ENST00000485705 RPGRIP1LQ68CZ1 1315 aa22.54■■□□□ 1.2
RPUSD3-217ENST00000485705 DMRT2Q9Y5R5 561 aa22.52■■□□□ 1.2
RPUSD3-217ENST00000485705 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
RPUSD3-217ENST00000485705 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
RPUSD3-217ENST00000485705 BCANQ96GW7 911 aa22.49■■□□□ 1.19
RPUSD3-217ENST00000485705 VGFO15240 615 aaPredicted RBP22.48■■□□□ 1.19
RPUSD3-217ENST00000485705 ADGRF5Q8IZF2 1346 aa22.48■■□□□ 1.19
RPUSD3-217ENST00000485705 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
RPUSD3-217ENST00000485705 NRXN3Q9Y4C0 1643 aa22.46■■□□□ 1.19
RPUSD3-217ENST00000485705 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
RPUSD3-217ENST00000485705 DCAF11Q8TEB1 546 aa22.45■■□□□ 1.18
RPUSD3-217ENST00000485705 FBXO41Q8TF61 875 aa22.45■■□□□ 1.18
RPUSD3-217ENST00000485705 ADAMTS13Q76LX8 1427 aa22.45■■□□□ 1.18
RPUSD3-217ENST00000485705 SETBP1Q9Y6X0 1596 aa22.43■■□□□ 1.18
RPUSD3-217ENST00000485705 L3MBTL2Q969R5 705 aa22.43■■□□□ 1.18
RPUSD3-217ENST00000485705 CLSPNQ9HAW4 1339 aa22.42■■□□□ 1.18
RPUSD3-217ENST00000485705 MYOM2P54296 1465 aa22.41■■□□□ 1.18
RPUSD3-217ENST00000485705 ZNF335Q9H4Z2 1342 aaPredicted RBP22.4■■□□□ 1.18
RPUSD3-217ENST00000485705 NRXN1Q9ULB1 1477 aa22.4■■□□□ 1.18
RPUSD3-217ENST00000485705 TBX22Q9Y458 520 aa22.39■■□□□ 1.17
RPUSD3-217ENST00000485705 SETD1AO15047 1707 aaKnown RBP22.38■■□□□ 1.17
RPUSD3-217ENST00000485705 PIK3C2GO75747 1445 aa22.38■■□□□ 1.17
RPUSD3-217ENST00000485705 ALKQ9UM73 1620 aa22.38■■□□□ 1.17
RPUSD3-217ENST00000485705 STRCP1A6NGW2 1772 aa22.38■■□□□ 1.17
RPUSD3-217ENST00000485705 DIP2AQ14689 1571 aa22.37■■□□□ 1.17
RPUSD3-217ENST00000485705 TONSLQ96HA7 1378 aa22.36■■□□□ 1.17
RPUSD3-217ENST00000485705 CHD2O14647 1828 aaKnown RBP22.35■■□□□ 1.17
RPUSD3-217ENST00000485705 METP08581 1390 aa22.35■■□□□ 1.17
RPUSD3-217ENST00000485705 STAC3Q96MF2 364 aa22.34■■□□□ 1.17
RPUSD3-217ENST00000485705 CFAP70Q5T0N1 1121 aa22.33■■□□□ 1.17
RPUSD3-217ENST00000485705 LTBP4Q8N2S1 1624 aa22.32■■□□□ 1.16
RPUSD3-217ENST00000485705 C14orf93Q9H972 538 aaKnown RBP22.32■■□□□ 1.16
RPUSD3-217ENST00000485705 PTPRUQ92729 1446 aa22.31■■□□□ 1.16
RPUSD3-217ENST00000485705 PRAG1Q86YV5 1406 aa22.31■■□□□ 1.16
RPUSD3-217ENST00000485705 KCNA6P17658 529 aa22.3■■□□□ 1.16
RPUSD3-217ENST00000485705 ASXL1Q8IXJ9 1541 aa22.3■■□□□ 1.16
RPUSD3-217ENST00000485705 TMEM132EQ6IEE7 984 aa22.29■■□□□ 1.16
RPUSD3-217ENST00000485705 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
RPUSD3-217ENST00000485705 NWD1Q149M9 1564 aa22.28■■□□□ 1.16
RPUSD3-217ENST00000485705 AMOTL2Q9Y2J4 779 aa22.27■■□□□ 1.16
RPUSD3-217ENST00000485705 LAMC1P11047 1609 aa22.27■■□□□ 1.16
RPUSD3-217ENST00000485705 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
RPUSD3-217ENST00000485705 XRN1Q8IZH2 1706 aaKnown RBP22.25■■□□□ 1.15
RPUSD3-217ENST00000485705 CPS1P31327 1500 aa22.23■■□□□ 1.15
RPUSD3-217ENST00000485705 KIAA1210Q9ULL0 1709 aa22.23■■□□□ 1.15
RPUSD3-217ENST00000485705 ADGRB1O14514 1584 aa22.22■■□□□ 1.15
RPUSD3-217ENST00000485705 NBPF1Q3BBV0 1214 aa22.22■■□□□ 1.15
RPUSD3-217ENST00000485705 RBM33Q96EV2 1170 aaKnown RBP22.22■■□□□ 1.15
RPUSD3-217ENST00000485705 STK26Q9P289 416 aa22.22■■□□□ 1.15
RPUSD3-217ENST00000485705 TIMELESSQ9UNS1 1208 aa22.21■■□□□ 1.15
RPUSD3-217ENST00000485705 XIRP1Q702N8 1843 aaKnown RBP22.21■■□□□ 1.15
RPUSD3-217ENST00000485705 LRRC7Q96NW7 1537 aa22.21■■□□□ 1.15
RPUSD3-217ENST00000485705 TRPM1Q7Z4N2 1603 aa22.2■■□□□ 1.15
RPUSD3-217ENST00000485705 YTHDC2Q9H6S0 1430 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-217ENST00000485705 NKTRP30414 1462 aaKnown RBP22.2■■□□□ 1.14
RPUSD3-217ENST00000485705 PROSER2Q86WR7 435 aaPredicted RBP22.19■■□□□ 1.14
RPUSD3-217ENST00000485705 LRPPRCP42704 1394 aaKnown RBP22.19■■□□□ 1.14
RPUSD3-217ENST00000485705 CERKQ8TCT0 537 aa22.18■■□□□ 1.14
RPUSD3-217ENST00000485705 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
RPUSD3-217ENST00000485705 TMEM94Q12767 1356 aa22.16■■□□□ 1.14
RPUSD3-217ENST00000485705 KNDC1Q76NI1 1749 aa22.16■■□□□ 1.14
RPUSD3-217ENST00000485705 ABCC11Q96J66 1382 aa22.15■■□□□ 1.14
RPUSD3-217ENST00000485705 TECPR2O15040 1411 aa22.14■■□□□ 1.13
RPUSD3-217ENST00000485705 TRAK1Q9UPV9 953 aa22.13■■□□□ 1.13
RPUSD3-217ENST00000485705 PTCH1Q13635 1447 aa22.13■■□□□ 1.13
RPUSD3-217ENST00000485705 WAPLQ7Z5K2 1190 aa22.12■■□□□ 1.13
RPUSD3-217ENST00000485705 ROCK2O75116 1388 aaKnown RBP22.12■■□□□ 1.13
RPUSD3-217ENST00000485705 RALGAPBQ86X10 1494 aa22.11■■□□□ 1.13
RPUSD3-217ENST00000485705 PLEKHH1Q9ULM0 1364 aa22.11■■□□□ 1.13
RPUSD3-217ENST00000485705 ARHGEF28Q8N1W1 1705 aaKnown RBP22.09■■□□□ 1.13
RPUSD3-217ENST00000485705 DLC1Q96QB1 1528 aa22.08■■□□□ 1.13
RPUSD3-217ENST00000485705 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
RPUSD3-217ENST00000485705 GPRASP1Q5JY77 1395 aa22.07■■□□□ 1.12
RPUSD3-217ENST00000485705 FAM135BQ49AJ0 1406 aa22.06■■□□□ 1.12
RPUSD3-217ENST00000485705 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
RPUSD3-217ENST00000485705 C14orf37Q86TY3 774 aa22.06■■□□□ 1.12
RPUSD3-217ENST00000485705 SIRT1Q96EB6 747 aa22.06■■□□□ 1.12
RPUSD3-217ENST00000485705 IQSEC2Q5JU85 1478 aa22.06■■□□□ 1.12
RPUSD3-217ENST00000485705 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.06■■□□□ 1.12
RPUSD3-217ENST00000485705 SAFB2Q14151 953 aaKnown RBP eCLIP22.05■■□□□ 1.12
RPUSD3-217ENST00000485705 NCOA3Q9Y6Q9 1424 aa22.05■■□□□ 1.12
RPUSD3-217ENST00000485705 CARD11Q9BXL7 1154 aa22.04■■□□□ 1.12
RPUSD3-217ENST00000485705 POGKQ9P215 609 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms