RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
SPTA1-207ENST00000485680 SLF2Q8IX21 1173 aa10.31□□□□□ -0.76
SPTA1-207ENST00000485680 EMID1Q96A84 441 aaPredicted RBP10.31□□□□□ -0.76
SPTA1-207ENST00000485680 E2F4Q16254 413 aa10.29□□□□□ -0.76
SPTA1-207ENST00000485680 NPDC1Q9NQX5 325 aaPredicted RBP10.29□□□□□ -0.76
SPTA1-207ENST00000485680 SLC19A1P41440 591 aa10.28□□□□□ -0.76
SPTA1-207ENST00000485680 RNF223E7ERA6 249 aa10.27□□□□□ -0.77
SPTA1-207ENST00000485680 MYT1Q01538 1121 aa10.27□□□□□ -0.77
SPTA1-207ENST00000485680 PADI6Q6TGC4 694 aa10.26□□□□□ -0.77
SPTA1-207ENST00000485680 POTECB2RU33 542 aa10.25□□□□□ -0.77
SPTA1-207ENST00000485680 DGAT1O75907 488 aa10.25□□□□□ -0.77
SPTA1-207ENST00000485680 EYA1Q99502 592 aa10.25□□□□□ -0.77
SPTA1-207ENST00000485680 SPRYD7Q5W111 196 aa10.24□□□□□ -0.77
SPTA1-207ENST00000485680 PRR20EP86478 221 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 PRR20CP86479 221 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 PRR20DP86480 221 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 PRR20BP86481 221 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 PRR20AP86496 221 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 PKDCCQ504Y2 493 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 ZNF598Q86UK7 904 aaKnown RBP10.23□□□□□ -0.77
SPTA1-207ENST00000485680 ARHGEF1Q92888 912 aaKnown RBP10.23□□□□□ -0.77
SPTA1-207ENST00000485680 PCDHB3Q9Y5E6 796 aa10.23□□□□□ -0.77
SPTA1-207ENST00000485680 BLOC1S3Q6QNY0 202 aa10.22□□□□□ -0.77
SPTA1-207ENST00000485680 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
SPTA1-207ENST00000485680 SLC4A3P48751 1232 aa10.2□□□□□ -0.78
SPTA1-207ENST00000485680 LIAT1Q6ZQX7 453 aa10.19□□□□□ -0.78
SPTA1-207ENST00000485680 ANKLE1Q8NAG6 615 aa10.19□□□□□ -0.78
SPTA1-207ENST00000485680 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
SPTA1-207ENST00000485680 TLL1O43897 1013 aa10.17□□□□□ -0.78
SPTA1-207ENST00000485680 GDF9O60383 454 aa10.17□□□□□ -0.78
SPTA1-207ENST00000485680 SEMA3EO15041 775 aa10.16□□□□□ -0.78
SPTA1-207ENST00000485680 LCE2AQ5TA79 106 aaPredicted RBP10.15□□□□□ -0.78
SPTA1-207ENST00000485680 ZNF697Q5TEC3 545 aa10.15□□□□□ -0.78
SPTA1-207ENST00000485680 FAM187AA6NFU0 413 aa10.14□□□□□ -0.79
SPTA1-207ENST00000485680 S1PR4O95977 384 aa10.14□□□□□ -0.79
SPTA1-207ENST00000485680 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPTA1-207ENST00000485680 LMOD2Q6P5Q4 547 aa10.13□□□□□ -0.79
SPTA1-207ENST00000485680 TREML4Q6UXN2 200 aa10.13□□□□□ -0.79
SPTA1-207ENST00000485680 TNFRSF10AO00220 468 aa10.12□□□□□ -0.79
SPTA1-207ENST00000485680 ACTN4O43707 911 aaKnown RBP10.12□□□□□ -0.79
SPTA1-207ENST00000485680 TESPA1A2RU30 521 aaPredicted RBP10.11□□□□□ -0.79
SPTA1-207ENST00000485680 DNAJB2P25686 324 aa10.11□□□□□ -0.79
SPTA1-207ENST00000485680 AAASQ9NRG9 546 aa10.1□□□□□ -0.79
SPTA1-207ENST00000485680 ST8SIA5O15466 376 aa10.09□□□□□ -0.79
SPTA1-207ENST00000485680 TMEM134Q9H6X4 195 aa10.09□□□□□ -0.79
SPTA1-207ENST00000485680 ADH1BP00325 375 aa10.08□□□□□ -0.8
SPTA1-207ENST00000485680 KMT5BQ4FZB7 885 aa10.08□□□□□ -0.8
SPTA1-207ENST00000485680 PLA2G2CQ5R387 149 aa10.08□□□□□ -0.8
SPTA1-207ENST00000485680 ADGRG1Q9Y653 693 aa10.06□□□□□ -0.8
SPTA1-207ENST00000485680 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
SPTA1-207ENST00000485680 CFHP08603 1231 aa10.05□□□□□ -0.8
SPTA1-207ENST00000485680 PTGDRQ13258 359 aa10.05□□□□□ -0.8
SPTA1-207ENST00000485680 RBM46Q8TBY0 533 aaKnown RBP10.05□□□□□ -0.8
SPTA1-207ENST00000485680 PKD2L1Q9P0L9 805 aa10.05□□□□□ -0.8
SPTA1-207ENST00000485680 RCCD1A6NED2 376 aa10.04□□□□□ -0.8
SPTA1-207ENST00000485680 SLC10A3P09131 477 aa10.04□□□□□ -0.8
SPTA1-207ENST00000485680 SLC6A16Q9GZN6 736 aa10.04□□□□□ -0.8
SPTA1-207ENST00000485680 NR1I2O75469 434 aa10.03□□□□□ -0.8
SPTA1-207ENST00000485680 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
SPTA1-207ENST00000485680 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
SPTA1-207ENST00000485680 CRIPAKQ8N1N5 446 aa10.01□□□□□ -0.81
SPTA1-207ENST00000485680 DACH1Q9UI36 760 aa10.01□□□□□ -0.81
SPTA1-207ENST00000485680 FOXC1Q12948 553 aa10□□□□□ -0.81
SPTA1-207ENST00000485680 FAM161AQ3B820 660 aa10□□□□□ -0.81
SPTA1-207ENST00000485680 AVPP01185 164 aa9.98□□□□□ -0.81
SPTA1-207ENST00000485680 SMYD5Q6GMV2 418 aa9.98□□□□□ -0.81
SPTA1-207ENST00000485680 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
SPTA1-207ENST00000485680 TOR4AQ9NXH8 423 aa9.97□□□□□ -0.81
SPTA1-207ENST00000485680 RBM26Q5T8P6 1007 aaKnown RBP9.96□□□□□ -0.82
SPTA1-207ENST00000485680 WFS1O76024 890 aa9.95□□□□□ -0.82
SPTA1-207ENST00000485680 RPIAP49247 311 aa9.95□□□□□ -0.82
SPTA1-207ENST00000485680 SPSB2Q99619 263 aa9.95□□□□□ -0.82
SPTA1-207ENST00000485680 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
SPTA1-207ENST00000485680 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
SPTA1-207ENST00000485680 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
SPTA1-207ENST00000485680 C11orf95C9JLR9 678 aaPredicted RBP9.92□□□□□ -0.82
SPTA1-207ENST00000485680 AXIN1O15169 862 aa9.92□□□□□ -0.82
SPTA1-207ENST00000485680 NFX1Q12986 1120 aaKnown RBP9.92□□□□□ -0.82
SPTA1-207ENST00000485680 CD2BP2O95400 341 aaKnown RBP9.91□□□□□ -0.82
SPTA1-207ENST00000485680 NUTM2FA1L443 756 aa9.9□□□□□ -0.82
SPTA1-207ENST00000485680 SMCPP49901 116 aaPredicted RBP9.9□□□□□ -0.82
SPTA1-207ENST00000485680 CTC1Q2NKJ3 1217 aa9.9□□□□□ -0.82
SPTA1-207ENST00000485680 PXYLP1Q8TE99 480 aa9.9□□□□□ -0.82
SPTA1-207ENST00000485680 STK17AQ9UEE5 414 aa9.9□□□□□ -0.82
SPTA1-207ENST00000485680 WIPF1O43516 503 aa9.89□□□□□ -0.83
SPTA1-207ENST00000485680 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
SPTA1-207ENST00000485680 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
SPTA1-207ENST00000485680 THAP11Q96EK4 314 aa9.88□□□□□ -0.83
SPTA1-207ENST00000485680 ZMYND10O75800 440 aa9.87□□□□□ -0.83
SPTA1-207ENST00000485680 SLC24A3Q9HC58 644 aa9.87□□□□□ -0.83
SPTA1-207ENST00000485680 FCF1Q9Y324 198 aaKnown RBP9.87□□□□□ -0.83
SPTA1-207ENST00000485680 OATP04181 439 aa9.86□□□□□ -0.83
SPTA1-207ENST00000485680 RSPH4AQ5TD94 716 aa9.86□□□□□ -0.83
SPTA1-207ENST00000485680 FAM160A2Q8N612 972 aaPredicted RBP9.86□□□□□ -0.83
SPTA1-207ENST00000485680 FCHSD2O94868 740 aa9.85□□□□□ -0.83
SPTA1-207ENST00000485680 MORN1Q5T089 497 aa9.85□□□□□ -0.83
SPTA1-207ENST00000485680 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
SPTA1-207ENST00000485680 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
SPTA1-207ENST00000485680 BARGINQ6ZT62 677 aa9.83□□□□□ -0.84
SPTA1-207ENST00000485680 METTL3Q86U44 580 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms