RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 SLC26A8Q96RN1 970 aa27.12■■□□□ 1.93
NPDC1-204ENST00000485589 SLC52A1Q9NWF4 448 aa27.12■■□□□ 1.93
NPDC1-204ENST00000485589 SPHKAPQ2M3C7 1700 aa27.12■■□□□ 1.93
NPDC1-204ENST00000485589 ITGAEP38570 1179 aa27.09■■□□□ 1.93
NPDC1-204ENST00000485589 SENP3Q9H4L4 574 aaPredicted RBP27.09■■□□□ 1.93
NPDC1-204ENST00000485589 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
NPDC1-204ENST00000485589 SOCS7O14512 581 aa27.07■■□□□ 1.92
NPDC1-204ENST00000485589 TMEM94Q12767 1356 aa27.06■■□□□ 1.92
NPDC1-204ENST00000485589 ROBO1Q9Y6N7 1651 aa27.05■■□□□ 1.92
NPDC1-204ENST00000485589 RBM33Q96EV2 1170 aaKnown RBP27.05■■□□□ 1.92
NPDC1-204ENST00000485589 KCNA6P17658 529 aa27.04■■□□□ 1.92
NPDC1-204ENST00000485589 NKTRP30414 1462 aaKnown RBP27.04■■□□□ 1.92
NPDC1-204ENST00000485589 PLEKHG1Q9ULL1 1385 aa27.03■■□□□ 1.92
NPDC1-204ENST00000485589 NUP155O75694 1391 aa27.02■■□□□ 1.92
NPDC1-204ENST00000485589 RRBP1Q9P2E9 1410 aaKnown RBP27.01■■□□□ 1.91
NPDC1-204ENST00000485589 NRXN3Q9Y4C0 1643 aa27■■□□□ 1.91
NPDC1-204ENST00000485589 ADAMTS13Q76LX8 1427 aa26.99■■□□□ 1.91
NPDC1-204ENST00000485589 NUTM2DQ5VT03 806 aaPredicted RBP26.96■■□□□ 1.91
NPDC1-204ENST00000485589 CLTCL1P53675 1640 aa26.96■■□□□ 1.91
NPDC1-204ENST00000485589 DIP2AQ14689 1571 aa26.95■■□□□ 1.9
NPDC1-204ENST00000485589 CHGAP10645 457 aaKnown RBP26.94■■□□□ 1.9
NPDC1-204ENST00000485589 PROSER2Q86WR7 435 aaPredicted RBP26.94■■□□□ 1.9
NPDC1-204ENST00000485589 FAM135BQ49AJ0 1406 aa26.93■■□□□ 1.9
NPDC1-204ENST00000485589 BCANQ96GW7 911 aa26.92■■□□□ 1.9
NPDC1-204ENST00000485589 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.92■■□□□ 1.9
NPDC1-204ENST00000485589 KIF1BO60333 1816 aa26.92■■□□□ 1.9
NPDC1-204ENST00000485589 NAIPQ13075 1403 aa26.91■■□□□ 1.9
NPDC1-204ENST00000485589 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
NPDC1-204ENST00000485589 PHLPP1O60346 1717 aa26.89■■□□□ 1.9
NPDC1-204ENST00000485589 XRN1Q8IZH2 1706 aaKnown RBP26.88■■□□□ 1.89
NPDC1-204ENST00000485589 PTPRUQ92729 1446 aa26.87■■□□□ 1.89
NPDC1-204ENST00000485589 TRPM2O94759 1503 aa26.86■■□□□ 1.89
NPDC1-204ENST00000485589 TBX22Q9Y458 520 aa26.86■■□□□ 1.89
NPDC1-204ENST00000485589 SETBP1Q9Y6X0 1596 aa26.86■■□□□ 1.89
NPDC1-204ENST00000485589 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
NPDC1-204ENST00000485589 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.84■■□□□ 1.89
NPDC1-204ENST00000485589 MSH6P52701 1360 aa26.83■■□□□ 1.88
NPDC1-204ENST00000485589 SETD1AO15047 1707 aaKnown RBP26.82■■□□□ 1.88
NPDC1-204ENST00000485589 COL16A1Q07092 1604 aaPredicted RBP26.82■■□□□ 1.88
NPDC1-204ENST00000485589 HDGFP51858 240 aaKnown RBP26.81■■□□□ 1.88
NPDC1-204ENST00000485589 RGS17Q9UGC6 210 aaPredicted RBP26.78■■□□□ 1.88
NPDC1-204ENST00000485589 PIK3R4Q99570 1358 aa26.78■■□□□ 1.88
NPDC1-204ENST00000485589 HFM1A2PYH4 1435 aa26.77■■□□□ 1.88
NPDC1-204ENST00000485589 NCOA3Q9Y6Q9 1424 aa26.75■■□□□ 1.87
NPDC1-204ENST00000485589 PHF23Q9BUL5 403 aaPredicted RBP26.75■■□□□ 1.87
NPDC1-204ENST00000485589 PPLO60437 1756 aa26.75■■□□□ 1.87
NPDC1-204ENST00000485589 NALCNQ8IZF0 1738 aa26.75■■□□□ 1.87
NPDC1-204ENST00000485589 SLAIN2Q9P270 581 aa26.74■■□□□ 1.87
NPDC1-204ENST00000485589 METP08581 1390 aa26.71■■□□□ 1.87
NPDC1-204ENST00000485589 AHDC1Q5TGY3 1603 aaPredicted RBP26.7■■□□□ 1.86
NPDC1-204ENST00000485589 AMOTL2Q9Y2J4 779 aa26.7■■□□□ 1.86
NPDC1-204ENST00000485589 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
NPDC1-204ENST00000485589 SHPRHQ149N8 1683 aa26.67■■□□□ 1.86
NPDC1-204ENST00000485589 NHSL1Q5SYE7 1610 aa26.65■■□□□ 1.86
NPDC1-204ENST00000485589 IFT172Q9UG01 1749 aa26.65■■□□□ 1.86
NPDC1-204ENST00000485589 C14orf37Q86TY3 774 aa26.63■■□□□ 1.85
NPDC1-204ENST00000485589 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
NPDC1-204ENST00000485589 LRP6O75581 1613 aa26.62■■□□□ 1.85
NPDC1-204ENST00000485589 TRIM52Q96A61 297 aa26.61■■□□□ 1.85
NPDC1-204ENST00000485589 JCADQ9P266 1359 aa26.59■■□□□ 1.85
NPDC1-204ENST00000485589 DCCP43146 1447 aa26.59■■□□□ 1.85
NPDC1-204ENST00000485589 MST1RQ04912 1400 aa26.59■■□□□ 1.85
NPDC1-204ENST00000485589 POTEAQ6S8J7 498 aa26.59■■□□□ 1.85
NPDC1-204ENST00000485589 ASXL1Q8IXJ9 1541 aa26.59■■□□□ 1.85
NPDC1-204ENST00000485589 CADPS2Q86UW7 1296 aa26.58■■□□□ 1.85
NPDC1-204ENST00000485589 FOXD1Q16676 465 aa26.57■■□□□ 1.84
NPDC1-204ENST00000485589 ATF3P18847 181 aa26.56■■□□□ 1.84
NPDC1-204ENST00000485589 SLC4A1APQ9BWU0 796 aaKnown RBP26.56■■□□□ 1.84
NPDC1-204ENST00000485589 ADGRL3Q9HAR2 1447 aa26.56■■□□□ 1.84
NPDC1-204ENST00000485589 BRINP3Q76B58 766 aa26.55■■□□□ 1.84
NPDC1-204ENST00000485589 PTCH1Q13635 1447 aa26.49■■□□□ 1.83
NPDC1-204ENST00000485589 LAMC1P11047 1609 aa26.49■■□□□ 1.83
NPDC1-204ENST00000485589 PRAG1Q86YV5 1406 aa26.48■■□□□ 1.83
NPDC1-204ENST00000485589 ROBO2Q9HCK4 1378 aa26.48■■□□□ 1.83
NPDC1-204ENST00000485589 SPATA31E1Q6ZUB1 1445 aa26.47■■□□□ 1.83
NPDC1-204ENST00000485589 DDX17Q92841 729 aaKnown RBP26.44■■□□□ 1.82
NPDC1-204ENST00000485589 RPGRIP1LQ68CZ1 1315 aa26.43■■□□□ 1.82
NPDC1-204ENST00000485589 KNDC1Q76NI1 1749 aa26.43■■□□□ 1.82
NPDC1-204ENST00000485589 SETD5Q9C0A6 1442 aa26.43■■□□□ 1.82
NPDC1-204ENST00000485589 VGFO15240 615 aaPredicted RBP26.43■■□□□ 1.82
NPDC1-204ENST00000485589 SPATA31A6Q5VVP1 1343 aa26.42■■□□□ 1.82
NPDC1-204ENST00000485589 C1orf167Q5SNV9 1468 aa26.41■■□□□ 1.82
NPDC1-204ENST00000485589 ADGRF5Q8IZF2 1346 aa26.4■■□□□ 1.82
NPDC1-204ENST00000485589 CCDC144AA2RUR9 1427 aa26.4■■□□□ 1.82
NPDC1-204ENST00000485589 MPHOSPH9Q99550 1183 aa26.4■■□□□ 1.82
NPDC1-204ENST00000485589 CDC42BPGQ6DT37 1551 aa26.36■■□□□ 1.81
NPDC1-204ENST00000485589 RGPD8O14715 1765 aaPredicted RBP26.35■■□□□ 1.81
NPDC1-204ENST00000485589 RGL3Q3MIN7 710 aa26.33■■□□□ 1.81
NPDC1-204ENST00000485589 PNPLA6Q8IY17 1366 aa26.33■■□□□ 1.8
NPDC1-204ENST00000485589 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
NPDC1-204ENST00000485589 NUTM2BA6NNL0 878 aaPredicted RBP26.31■■□□□ 1.8
NPDC1-204ENST00000485589 NUTM2EB1AL46 878 aaPredicted RBP26.31■■□□□ 1.8
NPDC1-204ENST00000485589 NUTM2AQ8IVF1 878 aaPredicted RBP26.31■■□□□ 1.8
NPDC1-204ENST00000485589 ORAI2Q96SN7 254 aa26.31■■□□□ 1.8
NPDC1-204ENST00000485589 FMN2Q9NZ56 1722 aa26.31■■□□□ 1.8
NPDC1-204ENST00000485589 TECPR2O15040 1411 aa26.3■■□□□ 1.8
NPDC1-204ENST00000485589 MEX3CQ5U5Q3 659 aaKnown RBP26.29■■□□□ 1.8
NPDC1-204ENST00000485589 COL22A1Q8NFW1 1626 aaPredicted RBP26.28■■□□□ 1.8
NPDC1-204ENST00000485589 MARF1Q9Y4F3 1742 aaKnown RBP26.28■■□□□ 1.8
NPDC1-204ENST00000485589 ANKRD30BQ9BXX2 1392 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms