RNA–Protein interactions for RNA: ENST00000485565.6

SPIN1-205, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-205ENST00000485565 NUP155O75694 1391 aa27.36■■□□□ 1.97
SPIN1-205ENST00000485565 ZFYVE9O95405 1425 aa27.3■■□□□ 1.96
SPIN1-205ENST00000485565 SPHKAPQ2M3C7 1700 aa27.3■■□□□ 1.96
SPIN1-205ENST00000485565 SLC26A8Q96RN1 970 aa27.29■■□□□ 1.96
SPIN1-205ENST00000485565 MED1Q15648 1581 aaPredicted RBP27.28■■□□□ 1.96
SPIN1-205ENST00000485565 RIMS2Q9UQ26 1411 aa27.27■■□□□ 1.96
SPIN1-205ENST00000485565 CHGAP10645 457 aaKnown RBP27.27■■□□□ 1.96
SPIN1-205ENST00000485565 SENP3Q9H4L4 574 aaPredicted RBP27.27■■□□□ 1.96
SPIN1-205ENST00000485565 NAIPQ13075 1403 aa27.25■■□□□ 1.95
SPIN1-205ENST00000485565 KCNA6P17658 529 aa27.23■■□□□ 1.95
SPIN1-205ENST00000485565 BCANQ96GW7 911 aa27.23■■□□□ 1.95
SPIN1-205ENST00000485565 NWD1Q149M9 1564 aa27.22■■□□□ 1.95
SPIN1-205ENST00000485565 PLEKHG1Q9ULL1 1385 aa27.22■■□□□ 1.95
SPIN1-205ENST00000485565 CHD2O14647 1828 aaKnown RBP27.21■■□□□ 1.95
SPIN1-205ENST00000485565 PPP1R15AO75807 674 aaPredicted RBP27.2■■□□□ 1.94
SPIN1-205ENST00000485565 TMEM94Q12767 1356 aa27.2■■□□□ 1.94
SPIN1-205ENST00000485565 HDGFP51858 240 aaKnown RBP27.17■■□□□ 1.94
SPIN1-205ENST00000485565 NUTM2DQ5VT03 806 aaPredicted RBP27.17■■□□□ 1.94
SPIN1-205ENST00000485565 HFM1A2PYH4 1435 aa27.16■■□□□ 1.94
SPIN1-205ENST00000485565 NKTRP30414 1462 aaKnown RBP27.15■■□□□ 1.94
SPIN1-205ENST00000485565 PROSER2Q86WR7 435 aaPredicted RBP27.15■■□□□ 1.94
SPIN1-205ENST00000485565 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.14■■□□□ 1.94
SPIN1-205ENST00000485565 RBM33Q96EV2 1170 aaKnown RBP27.14■■□□□ 1.94
SPIN1-205ENST00000485565 CLTCL1P53675 1640 aa27.14■■□□□ 1.94
SPIN1-205ENST00000485565 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
SPIN1-205ENST00000485565 FAM135BQ49AJ0 1406 aa27.1■■□□□ 1.93
SPIN1-205ENST00000485565 ADAMTS13Q76LX8 1427 aa27.1■■□□□ 1.93
SPIN1-205ENST00000485565 KIF1BO60333 1816 aa27.1■■□□□ 1.93
SPIN1-205ENST00000485565 TRPM2O94759 1503 aa27.1■■□□□ 1.93
SPIN1-205ENST00000485565 DIP2AQ14689 1571 aa27.09■■□□□ 1.93
SPIN1-205ENST00000485565 TRIM52Q96A61 297 aa27.07■■□□□ 1.92
SPIN1-205ENST00000485565 TBX22Q9Y458 520 aa27.07■■□□□ 1.92
SPIN1-205ENST00000485565 NRXN3Q9Y4C0 1643 aa27.05■■□□□ 1.92
SPIN1-205ENST00000485565 ROBO1Q9Y6N7 1651 aa27.03■■□□□ 1.92
SPIN1-205ENST00000485565 MSH6P52701 1360 aa27.02■■□□□ 1.92
SPIN1-205ENST00000485565 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
SPIN1-205ENST00000485565 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
SPIN1-205ENST00000485565 SETBP1Q9Y6X0 1596 aa27■■□□□ 1.91
SPIN1-205ENST00000485565 PIK3R4Q99570 1358 aa26.98■■□□□ 1.91
SPIN1-205ENST00000485565 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
SPIN1-205ENST00000485565 SLAIN2Q9P270 581 aa26.96■■□□□ 1.91
SPIN1-205ENST00000485565 PTPRUQ92729 1446 aa26.96■■□□□ 1.91
SPIN1-205ENST00000485565 XRN1Q8IZH2 1706 aaKnown RBP26.94■■□□□ 1.9
SPIN1-205ENST00000485565 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.94■■□□□ 1.9
SPIN1-205ENST00000485565 RGS17Q9UGC6 210 aaPredicted RBP26.93■■□□□ 1.9
SPIN1-205ENST00000485565 NCOA3Q9Y6Q9 1424 aa26.91■■□□□ 1.9
SPIN1-205ENST00000485565 AMOTL2Q9Y2J4 779 aa26.91■■□□□ 1.9
SPIN1-205ENST00000485565 C14orf37Q86TY3 774 aa26.9■■□□□ 1.9
SPIN1-205ENST00000485565 PPLO60437 1756 aa26.89■■□□□ 1.9
SPIN1-205ENST00000485565 FOXD1Q16676 465 aa26.89■■□□□ 1.9
SPIN1-205ENST00000485565 PHLPP1O60346 1717 aa26.87■■□□□ 1.89
SPIN1-205ENST00000485565 METP08581 1390 aa26.87■■□□□ 1.89
SPIN1-205ENST00000485565 SETD1AO15047 1707 aaKnown RBP26.87■■□□□ 1.89
SPIN1-205ENST00000485565 C19orf44Q9H6X5 657 aa26.84■■□□□ 1.89
SPIN1-205ENST00000485565 CADPS2Q86UW7 1296 aa26.83■■□□□ 1.89
SPIN1-205ENST00000485565 ATF3P18847 181 aa26.81■■□□□ 1.88
SPIN1-205ENST00000485565 MPHOSPH9Q99550 1183 aa26.81■■□□□ 1.88
SPIN1-205ENST00000485565 JCADQ9P266 1359 aa26.8■■□□□ 1.88
SPIN1-205ENST00000485565 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
SPIN1-205ENST00000485565 VGFO15240 615 aaPredicted RBP26.78■■□□□ 1.88
SPIN1-205ENST00000485565 IFT172Q9UG01 1749 aa26.77■■□□□ 1.88
SPIN1-205ENST00000485565 COL16A1Q07092 1604 aaPredicted RBP26.77■■□□□ 1.88
SPIN1-205ENST00000485565 CCDC144AA2RUR9 1427 aa26.77■■□□□ 1.88
SPIN1-205ENST00000485565 SETD5Q9C0A6 1442 aa26.77■■□□□ 1.88
SPIN1-205ENST00000485565 RPGRIP1LQ68CZ1 1315 aa26.77■■□□□ 1.88
SPIN1-205ENST00000485565 POTEAQ6S8J7 498 aa26.76■■□□□ 1.87
SPIN1-205ENST00000485565 DCCP43146 1447 aa26.73■■□□□ 1.87
SPIN1-205ENST00000485565 AHDC1Q5TGY3 1603 aaPredicted RBP26.72■■□□□ 1.87
SPIN1-205ENST00000485565 SPATA31E1Q6ZUB1 1445 aa26.71■■□□□ 1.87
SPIN1-205ENST00000485565 ADGRL3Q9HAR2 1447 aa26.7■■□□□ 1.86
SPIN1-205ENST00000485565 RGL3Q3MIN7 710 aa26.69■■□□□ 1.86
SPIN1-205ENST00000485565 BRINP3Q76B58 766 aa26.69■■□□□ 1.86
SPIN1-205ENST00000485565 RAB3GAP2Q9H2M9 1393 aa26.69■■□□□ 1.86
SPIN1-205ENST00000485565 MST1RQ04912 1400 aa26.68■■□□□ 1.86
SPIN1-205ENST00000485565 PTCH1Q13635 1447 aa26.67■■□□□ 1.86
SPIN1-205ENST00000485565 SPATA31A6Q5VVP1 1343 aa26.66■■□□□ 1.86
SPIN1-205ENST00000485565 ADGRF5Q8IZF2 1346 aa26.65■■□□□ 1.86
SPIN1-205ENST00000485565 ASXL1Q8IXJ9 1541 aa26.65■■□□□ 1.86
SPIN1-205ENST00000485565 ROBO2Q9HCK4 1378 aa26.65■■□□□ 1.86
SPIN1-205ENST00000485565 NHSL1Q5SYE7 1610 aa26.65■■□□□ 1.86
SPIN1-205ENST00000485565 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
SPIN1-205ENST00000485565 SHPRHQ149N8 1683 aa26.63■■□□□ 1.85
SPIN1-205ENST00000485565 LRP6O75581 1613 aa26.63■■□□□ 1.85
SPIN1-205ENST00000485565 PRAG1Q86YV5 1406 aa26.63■■□□□ 1.85
SPIN1-205ENST00000485565 ANKRD30BQ9BXX2 1392 aa26.6■■□□□ 1.85
SPIN1-205ENST00000485565 MEX3CQ5U5Q3 659 aaKnown RBP26.6■■□□□ 1.85
SPIN1-205ENST00000485565 KNDC1Q76NI1 1749 aa26.56■■□□□ 1.84
SPIN1-205ENST00000485565 PIK3C2GO75747 1445 aa26.56■■□□□ 1.84
SPIN1-205ENST00000485565 C1orf167Q5SNV9 1468 aa26.54■■□□□ 1.84
SPIN1-205ENST00000485565 ZNF772Q68DY9 489 aaPredicted RBP26.53■■□□□ 1.84
SPIN1-205ENST00000485565 NUTM2BA6NNL0 878 aaPredicted RBP26.52■■□□□ 1.84
SPIN1-205ENST00000485565 NUTM2EB1AL46 878 aaPredicted RBP26.52■■□□□ 1.84
SPIN1-205ENST00000485565 NUTM2AQ8IVF1 878 aaPredicted RBP26.52■■□□□ 1.84
SPIN1-205ENST00000485565 DDX17Q92841 729 aaKnown RBP26.52■■□□□ 1.84
SPIN1-205ENST00000485565 STK26Q9P289 416 aa26.51■■□□□ 1.83
SPIN1-205ENST00000485565 TMEM132EQ6IEE7 984 aa26.5■■□□□ 1.83
SPIN1-205ENST00000485565 LRRC59Q96AG4 307 aaKnown RBP26.5■■□□□ 1.83
SPIN1-205ENST00000485565 CDC42BPGQ6DT37 1551 aa26.5■■□□□ 1.83
SPIN1-205ENST00000485565 TECPR2O15040 1411 aa26.49■■□□□ 1.83
SPIN1-205ENST00000485565 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms