RNA–Protein interactions for RNA: ENST00000485532.1

PRAME-212, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 3

Gene PRAME, Length 709 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-212ENST00000485532 TMEM131LA2VDJ0 1609 aa19.41■□□□□ 0.7
PRAME-212ENST00000485532 ROCK1Q13464 1354 aa19.41■□□□□ 0.7
PRAME-212ENST00000485532 BCANQ96GW7 911 aa19.4■□□□□ 0.7
PRAME-212ENST00000485532 TMEM94Q12767 1356 aa19.4■□□□□ 0.7
PRAME-212ENST00000485532 ZFYVE9O95405 1425 aa19.4■□□□□ 0.7
PRAME-212ENST00000485532 KCNA6P17658 529 aa19.39■□□□□ 0.69
PRAME-212ENST00000485532 IQGAP3Q86VI3 1631 aa19.39■□□□□ 0.69
PRAME-212ENST00000485532 CHGAP10645 457 aaKnown RBP19.38■□□□□ 0.69
PRAME-212ENST00000485532 RIMS2Q9UQ26 1411 aa19.38■□□□□ 0.69
PRAME-212ENST00000485532 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
PRAME-212ENST00000485532 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
PRAME-212ENST00000485532 NWD1Q149M9 1564 aa19.36■□□□□ 0.69
PRAME-212ENST00000485532 NUP155O75694 1391 aa19.34■□□□□ 0.69
PRAME-212ENST00000485532 PLEKHG1Q9ULL1 1385 aa19.34■□□□□ 0.69
PRAME-212ENST00000485532 CHD2O14647 1828 aaKnown RBP19.33■□□□□ 0.69
PRAME-212ENST00000485532 PPP1R15AO75807 674 aaPredicted RBP19.33■□□□□ 0.68
PRAME-212ENST00000485532 NKTRP30414 1462 aaKnown RBP19.32■□□□□ 0.68
PRAME-212ENST00000485532 ROBO1Q9Y6N7 1651 aa19.3■□□□□ 0.68
PRAME-212ENST00000485532 PHF23Q9BUL5 403 aaPredicted RBP19.3■□□□□ 0.68
PRAME-212ENST00000485532 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
PRAME-212ENST00000485532 ADAMTS13Q76LX8 1427 aa19.27■□□□□ 0.68
PRAME-212ENST00000485532 HDGFP51858 240 aaKnown RBP19.27■□□□□ 0.68
PRAME-212ENST00000485532 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.26■□□□□ 0.67
PRAME-212ENST00000485532 TBX22Q9Y458 520 aa19.26■□□□□ 0.67
PRAME-212ENST00000485532 SPHKAPQ2M3C7 1700 aa19.25■□□□□ 0.67
PRAME-212ENST00000485532 MSH6P52701 1360 aa19.25■□□□□ 0.67
PRAME-212ENST00000485532 RRBP1Q9P2E9 1410 aaKnown RBP19.23■□□□□ 0.67
PRAME-212ENST00000485532 RGS17Q9UGC6 210 aaPredicted RBP19.22■□□□□ 0.67
PRAME-212ENST00000485532 DIP2AQ14689 1571 aa19.21■□□□□ 0.67
PRAME-212ENST00000485532 SLAIN2Q9P270 581 aa19.21■□□□□ 0.67
PRAME-212ENST00000485532 PTPRUQ92729 1446 aa19.2■□□□□ 0.66
PRAME-212ENST00000485532 NAIPQ13075 1403 aa19.19■□□□□ 0.66
PRAME-212ENST00000485532 NRXN3Q9Y4C0 1643 aa19.19■□□□□ 0.66
PRAME-212ENST00000485532 PHLPP1O60346 1717 aa19.19■□□□□ 0.66
PRAME-212ENST00000485532 CLTCL1P53675 1640 aa19.18■□□□□ 0.66
PRAME-212ENST00000485532 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.18■□□□□ 0.66
PRAME-212ENST00000485532 TRPM2O94759 1503 aa19.18■□□□□ 0.66
PRAME-212ENST00000485532 ZNF326Q5BKZ1 582 aaKnown RBP19.17■□□□□ 0.66
PRAME-212ENST00000485532 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
PRAME-212ENST00000485532 AMOTL2Q9Y2J4 779 aa19.16■□□□□ 0.66
PRAME-212ENST00000485532 PIK3R4Q99570 1358 aa19.15■□□□□ 0.66
PRAME-212ENST00000485532 NCOA3Q9Y6Q9 1424 aa19.14■□□□□ 0.65
PRAME-212ENST00000485532 SETBP1Q9Y6X0 1596 aa19.14■□□□□ 0.65
PRAME-212ENST00000485532 XRN1Q8IZH2 1706 aaKnown RBP19.12■□□□□ 0.65
PRAME-212ENST00000485532 COL16A1Q07092 1604 aaPredicted RBP19.12■□□□□ 0.65
PRAME-212ENST00000485532 NEXMIFQ5QGS0 1516 aa19.12■□□□□ 0.65
PRAME-212ENST00000485532 METP08581 1390 aa19.11■□□□□ 0.65
PRAME-212ENST00000485532 POTEAQ6S8J7 498 aa19.11■□□□□ 0.65
PRAME-212ENST00000485532 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
PRAME-212ENST00000485532 C19orf44Q9H6X5 657 aa19.11■□□□□ 0.65
PRAME-212ENST00000485532 KIF1BO60333 1816 aa19.11■□□□□ 0.65
PRAME-212ENST00000485532 ATF3P18847 181 aa19.1■□□□□ 0.65
PRAME-212ENST00000485532 CADPS2Q86UW7 1296 aa19.09■□□□□ 0.65
PRAME-212ENST00000485532 HFM1A2PYH4 1435 aa19.08■□□□□ 0.64
PRAME-212ENST00000485532 JCADQ9P266 1359 aa19.07■□□□□ 0.64
PRAME-212ENST00000485532 AHDC1Q5TGY3 1603 aaPredicted RBP19.05■□□□□ 0.64
PRAME-212ENST00000485532 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
PRAME-212ENST00000485532 LRP6O75581 1613 aa19.03■□□□□ 0.64
PRAME-212ENST00000485532 FOXD1Q16676 465 aa19.03■□□□□ 0.64
PRAME-212ENST00000485532 SLC4A1APQ9BWU0 796 aaKnown RBP19.03■□□□□ 0.64
PRAME-212ENST00000485532 NALCNQ8IZF0 1738 aa19.03■□□□□ 0.64
PRAME-212ENST00000485532 SETD1AO15047 1707 aaKnown RBP19.02■□□□□ 0.63
PRAME-212ENST00000485532 MST1RQ04912 1400 aa19.01■□□□□ 0.63
PRAME-212ENST00000485532 DCCP43146 1447 aa19■□□□□ 0.63
PRAME-212ENST00000485532 SHPRHQ149N8 1683 aa19■□□□□ 0.63
PRAME-212ENST00000485532 ASXL1Q8IXJ9 1541 aa19■□□□□ 0.63
PRAME-212ENST00000485532 PPLO60437 1756 aa18.98■□□□□ 0.63
PRAME-212ENST00000485532 DDX17Q92841 729 aaKnown RBP18.98■□□□□ 0.63
PRAME-212ENST00000485532 ADGRL3Q9HAR2 1447 aa18.98■□□□□ 0.63
PRAME-212ENST00000485532 SPATA31A6Q5VVP1 1343 aa18.97■□□□□ 0.63
PRAME-212ENST00000485532 NHSL1Q5SYE7 1610 aa18.96■□□□□ 0.63
PRAME-212ENST00000485532 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
PRAME-212ENST00000485532 ROBO2Q9HCK4 1378 aa18.95■□□□□ 0.62
PRAME-212ENST00000485532 MEX3CQ5U5Q3 659 aaKnown RBP18.95■□□□□ 0.62
PRAME-212ENST00000485532 NUTM2BA6NNL0 878 aaPredicted RBP18.94■□□□□ 0.62
PRAME-212ENST00000485532 NUTM2EB1AL46 878 aaPredicted RBP18.94■□□□□ 0.62
PRAME-212ENST00000485532 NUTM2AQ8IVF1 878 aaPredicted RBP18.94■□□□□ 0.62
PRAME-212ENST00000485532 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
PRAME-212ENST00000485532 PTCH1Q13635 1447 aa18.91■□□□□ 0.62
PRAME-212ENST00000485532 SETD5Q9C0A6 1442 aa18.91■□□□□ 0.62
PRAME-212ENST00000485532 C1orf167Q5SNV9 1468 aa18.9■□□□□ 0.62
PRAME-212ENST00000485532 RGL3Q3MIN7 710 aa18.9■□□□□ 0.62
PRAME-212ENST00000485532 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
PRAME-212ENST00000485532 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
PRAME-212ENST00000485532 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
PRAME-212ENST00000485532 IFT172Q9UG01 1749 aa18.88■□□□□ 0.61
PRAME-212ENST00000485532 SPATA31E1Q6ZUB1 1445 aa18.87■□□□□ 0.61
PRAME-212ENST00000485532 ORAI2Q96SN7 254 aa18.87■□□□□ 0.61
PRAME-212ENST00000485532 PRAG1Q86YV5 1406 aa18.86■□□□□ 0.61
PRAME-212ENST00000485532 LRRC59Q96AG4 307 aaKnown RBP18.86■□□□□ 0.61
PRAME-212ENST00000485532 PNPLA6Q8IY17 1366 aa18.85■□□□□ 0.61
PRAME-212ENST00000485532 ZNF772Q68DY9 489 aaPredicted RBP18.85■□□□□ 0.61
PRAME-212ENST00000485532 AFF2P51816 1311 aa18.84■□□□□ 0.61
PRAME-212ENST00000485532 STK26Q9P289 416 aa18.84■□□□□ 0.61
PRAME-212ENST00000485532 LAMC1P11047 1609 aa18.83■□□□□ 0.61
PRAME-212ENST00000485532 TMEM132EQ6IEE7 984 aa18.82■□□□□ 0.6
PRAME-212ENST00000485532 WAPLQ7Z5K2 1190 aa18.82■□□□□ 0.6
PRAME-212ENST00000485532 C8orf37Q96NL8 207 aa18.8■□□□□ 0.6
PRAME-212ENST00000485532 RXRBP28702 533 aa18.79■□□□□ 0.6
PRAME-212ENST00000485532 ANKRD30BQ9BXX2 1392 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms