RNA–Protein interactions for RNA: ENST00000485142.1

EFCAB6-210, Transcript of EF-hand calcium binding domain 6, humanhuman

TSL 3

Gene EFCAB6, Length 467 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB6-210ENST00000485142 CHGAP10645 457 aaKnown RBP23.47■■□□□ 1.35
EFCAB6-210ENST00000485142 SLC26A8Q96RN1 970 aa23.47■■□□□ 1.35
EFCAB6-210ENST00000485142 RIMS2Q9UQ26 1411 aa23.47■■□□□ 1.35
EFCAB6-210ENST00000485142 XIRP1Q702N8 1843 aaKnown RBP23.47■■□□□ 1.35
EFCAB6-210ENST00000485142 KCNA6P17658 529 aa23.46■■□□□ 1.35
EFCAB6-210ENST00000485142 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.46■■□□□ 1.35
EFCAB6-210ENST00000485142 ZFYVE9O95405 1425 aa23.45■■□□□ 1.34
EFCAB6-210ENST00000485142 PLEKHG1Q9ULL1 1385 aa23.45■■□□□ 1.34
EFCAB6-210ENST00000485142 NKTRP30414 1462 aaKnown RBP23.44■■□□□ 1.34
EFCAB6-210ENST00000485142 RRBP1Q9P2E9 1410 aaKnown RBP23.44■■□□□ 1.34
EFCAB6-210ENST00000485142 NWD1Q149M9 1564 aa23.43■■□□□ 1.34
EFCAB6-210ENST00000485142 TMEM94Q12767 1356 aa23.41■■□□□ 1.34
EFCAB6-210ENST00000485142 ILDR2Q71H61 639 aa23.41■■□□□ 1.34
EFCAB6-210ENST00000485142 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
EFCAB6-210ENST00000485142 SPHKAPQ2M3C7 1700 aa23.4■■□□□ 1.34
EFCAB6-210ENST00000485142 MED1Q15648 1581 aaPredicted RBP23.4■■□□□ 1.34
EFCAB6-210ENST00000485142 CHD2O14647 1828 aaKnown RBP23.38■■□□□ 1.33
EFCAB6-210ENST00000485142 DIP2AQ14689 1571 aa23.37■■□□□ 1.33
EFCAB6-210ENST00000485142 SOCS7O14512 581 aa23.35■■□□□ 1.33
EFCAB6-210ENST00000485142 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
EFCAB6-210ENST00000485142 MSH6P52701 1360 aa23.35■■□□□ 1.33
EFCAB6-210ENST00000485142 TBX22Q9Y458 520 aa23.34■■□□□ 1.33
EFCAB6-210ENST00000485142 NAIPQ13075 1403 aa23.32■■□□□ 1.32
EFCAB6-210ENST00000485142 FAM135BQ49AJ0 1406 aa23.32■■□□□ 1.32
EFCAB6-210ENST00000485142 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
EFCAB6-210ENST00000485142 PIK3R4Q99570 1358 aa23.3■■□□□ 1.32
EFCAB6-210ENST00000485142 TRPM2O94759 1503 aa23.29■■□□□ 1.32
EFCAB6-210ENST00000485142 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
EFCAB6-210ENST00000485142 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
EFCAB6-210ENST00000485142 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
EFCAB6-210ENST00000485142 HFM1A2PYH4 1435 aa23.27■■□□□ 1.32
EFCAB6-210ENST00000485142 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
EFCAB6-210ENST00000485142 TRIM26Q12899 539 aaPredicted RBP23.27■■□□□ 1.32
EFCAB6-210ENST00000485142 RBM33Q96EV2 1170 aaKnown RBP23.27■■□□□ 1.32
EFCAB6-210ENST00000485142 KIF1BO60333 1816 aa23.26■■□□□ 1.31
EFCAB6-210ENST00000485142 NCOA3Q9Y6Q9 1424 aa23.26■■□□□ 1.31
EFCAB6-210ENST00000485142 C14orf37Q86TY3 774 aa23.26■■□□□ 1.31
EFCAB6-210ENST00000485142 TRIM52Q96A61 297 aa23.25■■□□□ 1.31
EFCAB6-210ENST00000485142 CLTCL1P53675 1640 aa23.22■■□□□ 1.31
EFCAB6-210ENST00000485142 SETBP1Q9Y6X0 1596 aa23.22■■□□□ 1.31
EFCAB6-210ENST00000485142 SLAIN2Q9P270 581 aa23.21■■□□□ 1.31
EFCAB6-210ENST00000485142 ATF3P18847 181 aa23.17■■□□□ 1.3
EFCAB6-210ENST00000485142 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
EFCAB6-210ENST00000485142 SLC4A1APQ9BWU0 796 aaKnown RBP23.17■■□□□ 1.3
EFCAB6-210ENST00000485142 AMOTL2Q9Y2J4 779 aa23.17■■□□□ 1.3
EFCAB6-210ENST00000485142 NRXN3Q9Y4C0 1643 aa23.17■■□□□ 1.3
EFCAB6-210ENST00000485142 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
EFCAB6-210ENST00000485142 C19orf44Q9H6X5 657 aa23.16■■□□□ 1.3
EFCAB6-210ENST00000485142 NEXMIFQ5QGS0 1516 aa23.16■■□□□ 1.3
EFCAB6-210ENST00000485142 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
EFCAB6-210ENST00000485142 XRN1Q8IZH2 1706 aaKnown RBP23.13■■□□□ 1.29
EFCAB6-210ENST00000485142 PTPRUQ92729 1446 aa23.11■■□□□ 1.29
EFCAB6-210ENST00000485142 DCCP43146 1447 aa23.1■■□□□ 1.29
EFCAB6-210ENST00000485142 VGFO15240 615 aaPredicted RBP23.1■■□□□ 1.29
EFCAB6-210ENST00000485142 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.29
EFCAB6-210ENST00000485142 ACIN1Q9UKV3 1341 aaKnown RBP23.08■■□□□ 1.28
EFCAB6-210ENST00000485142 JCADQ9P266 1359 aa23.07■■□□□ 1.28
EFCAB6-210ENST00000485142 METP08581 1390 aa23.06■■□□□ 1.28
EFCAB6-210ENST00000485142 COL16A1Q07092 1604 aaPredicted RBP23.04■■□□□ 1.28
EFCAB6-210ENST00000485142 PPLO60437 1756 aa23.04■■□□□ 1.28
EFCAB6-210ENST00000485142 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
EFCAB6-210ENST00000485142 CCDC144AA2RUR9 1427 aa23.03■■□□□ 1.28
EFCAB6-210ENST00000485142 PCGF6Q9BYE7 350 aa23.02■■□□□ 1.28
EFCAB6-210ENST00000485142 ADGRL3Q9HAR2 1447 aa23■■□□□ 1.27
EFCAB6-210ENST00000485142 SETD1AO15047 1707 aaKnown RBP22.98■■□□□ 1.27
EFCAB6-210ENST00000485142 NALCNQ8IZF0 1738 aa22.98■■□□□ 1.27
EFCAB6-210ENST00000485142 PTCH1Q13635 1447 aa22.98■■□□□ 1.27
EFCAB6-210ENST00000485142 BRINP3Q76B58 766 aa22.97■■□□□ 1.27
EFCAB6-210ENST00000485142 MPHOSPH9Q99550 1183 aa22.97■■□□□ 1.27
EFCAB6-210ENST00000485142 SPATA31A6Q5VVP1 1343 aa22.97■■□□□ 1.27
EFCAB6-210ENST00000485142 ASXL1Q8IXJ9 1541 aa22.97■■□□□ 1.27
EFCAB6-210ENST00000485142 SHPRHQ149N8 1683 aa22.97■■□□□ 1.27
EFCAB6-210ENST00000485142 FOXD1Q16676 465 aa22.96■■□□□ 1.27
EFCAB6-210ENST00000485142 MST1RQ04912 1400 aa22.95■■□□□ 1.26
EFCAB6-210ENST00000485142 RGS17Q9UGC6 210 aaPredicted RBP22.95■■□□□ 1.26
EFCAB6-210ENST00000485142 SETD5Q9C0A6 1442 aa22.93■■□□□ 1.26
EFCAB6-210ENST00000485142 MEX3CQ5U5Q3 659 aaKnown RBP22.93■■□□□ 1.26
EFCAB6-210ENST00000485142 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
EFCAB6-210ENST00000485142 ANKRD30BQ9BXX2 1392 aa22.92■■□□□ 1.26
EFCAB6-210ENST00000485142 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
EFCAB6-210ENST00000485142 IFT172Q9UG01 1749 aa22.91■■□□□ 1.26
EFCAB6-210ENST00000485142 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
EFCAB6-210ENST00000485142 SPATA31E1Q6ZUB1 1445 aa22.89■■□□□ 1.25
EFCAB6-210ENST00000485142 ROBO2Q9HCK4 1378 aa22.89■■□□□ 1.25
EFCAB6-210ENST00000485142 POTEAQ6S8J7 498 aa22.86■■□□□ 1.25
EFCAB6-210ENST00000485142 LRRC59Q96AG4 307 aaKnown RBP22.86■■□□□ 1.25
EFCAB6-210ENST00000485142 LRP6O75581 1613 aa22.85■■□□□ 1.25
EFCAB6-210ENST00000485142 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
EFCAB6-210ENST00000485142 ADGRF5Q8IZF2 1346 aa22.84■■□□□ 1.25
EFCAB6-210ENST00000485142 ZNF772Q68DY9 489 aaPredicted RBP22.83■■□□□ 1.25
EFCAB6-210ENST00000485142 RAB3GAP2Q9H2M9 1393 aa22.81■■□□□ 1.24
EFCAB6-210ENST00000485142 CDC42BPGQ6DT37 1551 aa22.8■■□□□ 1.24
EFCAB6-210ENST00000485142 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
EFCAB6-210ENST00000485142 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
EFCAB6-210ENST00000485142 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
EFCAB6-210ENST00000485142 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
EFCAB6-210ENST00000485142 PIK3C2GO75747 1445 aa22.8■■□□□ 1.24
EFCAB6-210ENST00000485142 LAMC1P11047 1609 aa22.79■■□□□ 1.24
EFCAB6-210ENST00000485142 LRPPRCP42704 1394 aaKnown RBP22.78■■□□□ 1.24
EFCAB6-210ENST00000485142 TECPR2O15040 1411 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms