RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 FAM50AQ14320 339 aaKnown RBP17.87■□□□□ 0.45
COL13A1-209ENST00000484990 POTEAQ6S8J7 498 aa17.87■□□□□ 0.45
COL13A1-209ENST00000484990 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
COL13A1-209ENST00000484990 ROBO1Q9Y6N7 1651 aa17.86■□□□□ 0.45
COL13A1-209ENST00000484990 ADGRB3O60242 1522 aa17.85■□□□□ 0.45
COL13A1-209ENST00000484990 RPRD2Q5VT52 1461 aaKnown RBP17.85■□□□□ 0.45
COL13A1-209ENST00000484990 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
COL13A1-209ENST00000484990 TBX22Q9Y458 520 aa17.84■□□□□ 0.45
COL13A1-209ENST00000484990 ADGRL2O95490 1459 aa17.83■□□□□ 0.45
COL13A1-209ENST00000484990 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.45
COL13A1-209ENST00000484990 PLEKHG1Q9ULL1 1385 aa17.83■□□□□ 0.45
COL13A1-209ENST00000484990 CHGAP10645 457 aaKnown RBP17.82■□□□□ 0.44
COL13A1-209ENST00000484990 RIMS2Q9UQ26 1411 aa17.81■□□□□ 0.44
COL13A1-209ENST00000484990 JCADQ9P266 1359 aa17.81■□□□□ 0.44
COL13A1-209ENST00000484990 C14orf37Q86TY3 774 aa17.81■□□□□ 0.44
COL13A1-209ENST00000484990 NWD1Q149M9 1564 aa17.81■□□□□ 0.44
COL13A1-209ENST00000484990 NCOA3Q9Y6Q9 1424 aa17.81■□□□□ 0.44
COL13A1-209ENST00000484990 CHD2O14647 1828 aaKnown RBP17.8■□□□□ 0.44
COL13A1-209ENST00000484990 ZFYVE9O95405 1425 aa17.79■□□□□ 0.44
COL13A1-209ENST00000484990 CADPS2Q86UW7 1296 aa17.78■□□□□ 0.44
COL13A1-209ENST00000484990 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
COL13A1-209ENST00000484990 PHLPP1O60346 1717 aa17.78■□□□□ 0.44
COL13A1-209ENST00000484990 ATF3P18847 181 aa17.77■□□□□ 0.44
COL13A1-209ENST00000484990 MYO5BQ9ULV0 1848 aa17.76■□□□□ 0.43
COL13A1-209ENST00000484990 SPATA31A6Q5VVP1 1343 aa17.75■□□□□ 0.43
COL13A1-209ENST00000484990 TMEM131LA2VDJ0 1609 aa17.74■□□□□ 0.43
COL13A1-209ENST00000484990 MEX3CQ5U5Q3 659 aaKnown RBP17.74■□□□□ 0.43
COL13A1-209ENST00000484990 NUTM2DQ5VT03 806 aaPredicted RBP17.74■□□□□ 0.43
COL13A1-209ENST00000484990 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
COL13A1-209ENST00000484990 GCC2Q8IWJ2 1684 aa17.74■□□□□ 0.43
COL13A1-209ENST00000484990 ZNF772Q68DY9 489 aaPredicted RBP17.73■□□□□ 0.43
COL13A1-209ENST00000484990 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
COL13A1-209ENST00000484990 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
COL13A1-209ENST00000484990 DIP2AQ14689 1571 aa17.68■□□□□ 0.42
COL13A1-209ENST00000484990 NUP155O75694 1391 aa17.67■□□□□ 0.42
COL13A1-209ENST00000484990 ROCK1Q13464 1354 aa17.67■□□□□ 0.42
COL13A1-209ENST00000484990 COL16A1Q07092 1604 aaPredicted RBP17.67■□□□□ 0.42
COL13A1-209ENST00000484990 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.67■□□□□ 0.42
COL13A1-209ENST00000484990 UNC13BO14795 1591 aa17.66■□□□□ 0.42
COL13A1-209ENST00000484990 E9PCH4 1651 aa17.66■□□□□ 0.42
COL13A1-209ENST00000484990 TRPM2O94759 1503 aa17.64■□□□□ 0.41
COL13A1-209ENST00000484990 RXRBP28702 533 aa17.64■□□□□ 0.41
COL13A1-209ENST00000484990 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
COL13A1-209ENST00000484990 AHDC1Q5TGY3 1603 aaPredicted RBP17.63■□□□□ 0.41
COL13A1-209ENST00000484990 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
COL13A1-209ENST00000484990 TRIM52Q96A61 297 aa17.63■□□□□ 0.41
COL13A1-209ENST00000484990 NUTM2BA6NNL0 878 aaPredicted RBP17.62■□□□□ 0.41
COL13A1-209ENST00000484990 NUTM2EB1AL46 878 aaPredicted RBP17.62■□□□□ 0.41
COL13A1-209ENST00000484990 ITGAEP38570 1179 aa17.62■□□□□ 0.41
COL13A1-209ENST00000484990 NUTM2AQ8IVF1 878 aaPredicted RBP17.62■□□□□ 0.41
COL13A1-209ENST00000484990 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL13A1-209ENST00000484990 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
COL13A1-209ENST00000484990 LRP6O75581 1613 aa17.61■□□□□ 0.41
COL13A1-209ENST00000484990 IQGAP3Q86VI3 1631 aa17.61■□□□□ 0.41
COL13A1-209ENST00000484990 DCCP43146 1447 aa17.6■□□□□ 0.41
COL13A1-209ENST00000484990 PTPRUQ92729 1446 aa17.6■□□□□ 0.41
COL13A1-209ENST00000484990 SHPRHQ149N8 1683 aa17.6■□□□□ 0.41
COL13A1-209ENST00000484990 SETD1AO15047 1707 aaKnown RBP17.6■□□□□ 0.41
COL13A1-209ENST00000484990 SETD5Q9C0A6 1442 aa17.55■□□□□ 0.4
COL13A1-209ENST00000484990 AFF2P51816 1311 aa17.55■□□□□ 0.4
COL13A1-209ENST00000484990 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
COL13A1-209ENST00000484990 MST1RQ04912 1400 aa17.53■□□□□ 0.4
COL13A1-209ENST00000484990 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
COL13A1-209ENST00000484990 METP08581 1390 aa17.53■□□□□ 0.4
COL13A1-209ENST00000484990 ASXL1Q8IXJ9 1541 aa17.52■□□□□ 0.4
COL13A1-209ENST00000484990 CDK12Q9NYV4 1490 aaPredicted RBP17.52■□□□□ 0.4
COL13A1-209ENST00000484990 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
COL13A1-209ENST00000484990 C8orf37Q96NL8 207 aa17.51■□□□□ 0.39
COL13A1-209ENST00000484990 SPHKAPQ2M3C7 1700 aa17.5■□□□□ 0.39
COL13A1-209ENST00000484990 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
COL13A1-209ENST00000484990 VGFO15240 615 aaPredicted RBP17.5■□□□□ 0.39
COL13A1-209ENST00000484990 NRXN3Q9Y4C0 1643 aa17.49■□□□□ 0.39
COL13A1-209ENST00000484990 ADGRL3Q9HAR2 1447 aa17.48■□□□□ 0.39
COL13A1-209ENST00000484990 DDX17Q92841 729 aaKnown RBP17.48■□□□□ 0.39
COL13A1-209ENST00000484990 NGLY1Q96IV0 654 aa17.48■□□□□ 0.39
COL13A1-209ENST00000484990 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
COL13A1-209ENST00000484990 PPARGC1BQ86YN6 1023 aaKnown RBP17.47■□□□□ 0.39
COL13A1-209ENST00000484990 PNPLA6Q8IY17 1366 aa17.46■□□□□ 0.39
COL13A1-209ENST00000484990 ADAMTS2O95450 1211 aa17.44■□□□□ 0.38
COL13A1-209ENST00000484990 KIF1BO60333 1816 aa17.44■□□□□ 0.38
COL13A1-209ENST00000484990 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
COL13A1-209ENST00000484990 C1orf167Q5SNV9 1468 aa17.44■□□□□ 0.38
COL13A1-209ENST00000484990 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
COL13A1-209ENST00000484990 ORAI2Q96SN7 254 aa17.42■□□□□ 0.38
COL13A1-209ENST00000484990 SOS2Q07890 1332 aaPredicted RBP17.42■□□□□ 0.38
COL13A1-209ENST00000484990 USP21Q9UK80 565 aa17.41■□□□□ 0.38
COL13A1-209ENST00000484990 CLTCL1P53675 1640 aa17.4■□□□□ 0.38
COL13A1-209ENST00000484990 FOXD1Q16676 465 aa17.4■□□□□ 0.38
COL13A1-209ENST00000484990 TRPC5Q9UL62 973 aaPredicted RBP17.4■□□□□ 0.38
COL13A1-209ENST00000484990 RGS12O14924 1447 aa17.38■□□□□ 0.37
COL13A1-209ENST00000484990 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
COL13A1-209ENST00000484990 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
COL13A1-209ENST00000484990 FNBP4Q8N3X1 1017 aaPredicted RBP17.37■□□□□ 0.37
COL13A1-209ENST00000484990 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
COL13A1-209ENST00000484990 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
COL13A1-209ENST00000484990 SLC4A1APQ9BWU0 796 aaKnown RBP17.36■□□□□ 0.37
COL13A1-209ENST00000484990 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
COL13A1-209ENST00000484990 NPHP3Q7Z494 1330 aa17.35■□□□□ 0.37
COL13A1-209ENST00000484990 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
COL13A1-209ENST00000484990 NAIPQ13075 1403 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms