RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 MYO3AQ8NEV4 1616 aa29.11■■■□□ 2.25
VCPKMT-203ENST00000484763 UBR1Q8IWV7 1749 aa29.1■■■□□ 2.25
VCPKMT-203ENST00000484763 PTPRMP28827 1452 aa29.08■■■□□ 2.25
VCPKMT-203ENST00000484763 NRXN1Q9ULB1 1477 aa29.08■■■□□ 2.25
VCPKMT-203ENST00000484763 KIAA1210Q9ULL0 1709 aa29.04■■■□□ 2.24
VCPKMT-203ENST00000484763 ZFYVE9O95405 1425 aa29.02■■■□□ 2.24
VCPKMT-203ENST00000484763 ADGRF5Q8IZF2 1346 aa29.02■■■□□ 2.24
VCPKMT-203ENST00000484763 ROCK2O75116 1388 aaKnown RBP29■■■□□ 2.23
VCPKMT-203ENST00000484763 SETD1BQ9UPS6 1966 aaKnown RBP29■■■□□ 2.23
VCPKMT-203ENST00000484763 VGFO15240 615 aaPredicted RBP29■■■□□ 2.23
VCPKMT-203ENST00000484763 PIK3C2GO75747 1445 aa29■■■□□ 2.23
VCPKMT-203ENST00000484763 CEP170BQ9Y4F5 1589 aaPredicted RBP29■■■□□ 2.23
VCPKMT-203ENST00000484763 ZNF142P52746 1687 aaPredicted RBP28.99■■■□□ 2.23
VCPKMT-203ENST00000484763 LAMC1P11047 1609 aa28.99■■■□□ 2.23
VCPKMT-203ENST00000484763 RIMS2Q9UQ26 1411 aa28.99■■■□□ 2.23
VCPKMT-203ENST00000484763 ZNF316A6NFI3 1004 aaPredicted RBP28.97■■■□□ 2.23
VCPKMT-203ENST00000484763 GPRASP1Q5JY77 1395 aa28.97■■■□□ 2.23
VCPKMT-203ENST00000484763 NUTM2DQ5VT03 806 aaPredicted RBP28.94■■■□□ 2.22
VCPKMT-203ENST00000484763 TMEM2Q9UHN6 1383 aa28.94■■■□□ 2.22
VCPKMT-203ENST00000484763 CARD11Q9BXL7 1154 aa28.94■■■□□ 2.22
VCPKMT-203ENST00000484763 EIF4G2P78344 907 aaKnown RBP eCLIP28.92■■■□□ 2.22
VCPKMT-203ENST00000484763 NBPF1Q3BBV0 1214 aa28.92■■■□□ 2.22
VCPKMT-203ENST00000484763 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.91■■■□□ 2.22
VCPKMT-203ENST00000484763 SLIT1O75093 1534 aa28.91■■■□□ 2.22
VCPKMT-203ENST00000484763 HDGFP51858 240 aaKnown RBP28.9■■■□□ 2.22
VCPKMT-203ENST00000484763 USP47Q96K76 1375 aa28.89■■■□□ 2.22
VCPKMT-203ENST00000484763 SETBP1Q9Y6X0 1596 aa28.89■■■□□ 2.22
VCPKMT-203ENST00000484763 ARHGAP23Q9P227 1491 aa28.88■■■□□ 2.21
VCPKMT-203ENST00000484763 KDM4FA0A1W2PPD8 638 aa28.87■■■□□ 2.21
VCPKMT-203ENST00000484763 HSPA5P11021 654 aaKnown RBP28.87■■■□□ 2.21
VCPKMT-203ENST00000484763 CFAP70Q5T0N1 1121 aa28.87■■■□□ 2.21
VCPKMT-203ENST00000484763 THEMISQ8N1K5 641 aaPredicted RBP28.87■■■□□ 2.21
VCPKMT-203ENST00000484763 C14orf93Q9H972 538 aaKnown RBP28.86■■■□□ 2.21
VCPKMT-203ENST00000484763 IQGAP1P46940 1657 aa28.86■■■□□ 2.21
VCPKMT-203ENST00000484763 ADGRB1O14514 1584 aa28.82■■■□□ 2.2
VCPKMT-203ENST00000484763 HIRIP3Q9BW71 556 aaPredicted RBP28.82■■■□□ 2.2
VCPKMT-203ENST00000484763 SCAF11Q99590 1463 aaKnown RBP28.81■■■□□ 2.2
VCPKMT-203ENST00000484763 ALKQ9UM73 1620 aa28.81■■■□□ 2.2
VCPKMT-203ENST00000484763 NRXN3Q9Y4C0 1643 aa28.81■■■□□ 2.2
VCPKMT-203ENST00000484763 EID1Q9Y6B2 187 aa28.79■■■□□ 2.2
VCPKMT-203ENST00000484763 SETD1AO15047 1707 aaKnown RBP28.78■■■□□ 2.2
VCPKMT-203ENST00000484763 PLEKHG1Q9ULL1 1385 aa28.76■■■□□ 2.2
VCPKMT-203ENST00000484763 TXNDC2Q86VQ3 553 aa28.76■■■□□ 2.19
VCPKMT-203ENST00000484763 LTKP29376 864 aa28.76■■■□□ 2.19
VCPKMT-203ENST00000484763 ASXL1Q8IXJ9 1541 aa28.76■■■□□ 2.19
VCPKMT-203ENST00000484763 EIF3AQ14152 1382 aaKnown RBP28.73■■■□□ 2.19
VCPKMT-203ENST00000484763 SENP3Q9H4L4 574 aaPredicted RBP28.73■■■□□ 2.19
VCPKMT-203ENST00000484763 ST20-MTHFSA0A0A6YYL1 179 aa28.71■■■□□ 2.19
VCPKMT-203ENST00000484763 POLR1AO95602 1720 aaPredicted RBP28.71■■■□□ 2.19
VCPKMT-203ENST00000484763 TMEM132EQ6IEE7 984 aa28.7■■■□□ 2.18
VCPKMT-203ENST00000484763 BCANQ96GW7 911 aa28.67■■■□□ 2.18
VCPKMT-203ENST00000484763 ADAMTS13Q76LX8 1427 aa28.67■■■□□ 2.18
VCPKMT-203ENST00000484763 DIP2AQ14689 1571 aa28.66■■■□□ 2.18
VCPKMT-203ENST00000484763 ARHGEF28Q8N1W1 1705 aaKnown RBP28.66■■■□□ 2.18
VCPKMT-203ENST00000484763 ANKLE2Q86XL3 938 aa28.65■■■□□ 2.18
VCPKMT-203ENST00000484763 YTHDC2Q9H6S0 1430 aaKnown RBP28.64■■■□□ 2.18
VCPKMT-203ENST00000484763 MED14O60244 1454 aa28.63■■■□□ 2.17
VCPKMT-203ENST00000484763 TRAK1Q9UPV9 953 aa28.62■■■□□ 2.17
VCPKMT-203ENST00000484763 METP08581 1390 aa28.6■■■□□ 2.17
VCPKMT-203ENST00000484763 KNDC1Q76NI1 1749 aa28.59■■■□□ 2.17
VCPKMT-203ENST00000484763 QRICH2Q9H0J4 1663 aa28.58■■■□□ 2.17
VCPKMT-203ENST00000484763 LRPPRCP42704 1394 aaKnown RBP28.58■■■□□ 2.17
VCPKMT-203ENST00000484763 TESK2Q96S53 571 aa28.58■■■□□ 2.17
VCPKMT-203ENST00000484763 WASHC2AQ641Q2 1341 aa28.58■■■□□ 2.17
VCPKMT-203ENST00000484763 LMTK3Q96Q04 1460 aa28.58■■■□□ 2.17
VCPKMT-203ENST00000484763 CCDC7Q96M83 1385 aa28.57■■■□□ 2.16
VCPKMT-203ENST00000484763 DLC1Q96QB1 1528 aa28.57■■■□□ 2.16
VCPKMT-203ENST00000484763 C11orf95C9JLR9 678 aaPredicted RBP28.56■■■□□ 2.16
VCPKMT-203ENST00000484763 CENPJQ9HC77 1338 aaPredicted RBP28.56■■■□□ 2.16
VCPKMT-203ENST00000484763 STK26Q9P289 416 aa28.55■■■□□ 2.16
VCPKMT-203ENST00000484763 TBX22Q9Y458 520 aa28.55■■■□□ 2.16
VCPKMT-203ENST00000484763 KIF7Q2M1P5 1343 aa28.54■■■□□ 2.16
VCPKMT-203ENST00000484763 SBNO2Q9Y2G9 1366 aa28.54■■■□□ 2.16
VCPKMT-203ENST00000484763 SLC26A8Q96RN1 970 aa28.54■■■□□ 2.16
VCPKMT-203ENST00000484763 NPHP4O75161 1426 aaPredicted RBP28.54■■■□□ 2.16
VCPKMT-203ENST00000484763 ABCC11Q96J66 1382 aa28.53■■■□□ 2.16
VCPKMT-203ENST00000484763 TECPR2O15040 1411 aa28.52■■■□□ 2.16
VCPKMT-203ENST00000484763 CPS1P31327 1500 aa28.52■■■□□ 2.16
VCPKMT-203ENST00000484763 TMF1P82094 1093 aa28.51■■■□□ 2.15
VCPKMT-203ENST00000484763 SLC24A1O60721 1099 aa28.5■■■□□ 2.15
VCPKMT-203ENST00000484763 DIEXFQ68CQ4 756 aaKnown RBP28.5■■■□□ 2.15
VCPKMT-203ENST00000484763 DISP3Q9P2K9 1392 aa28.5■■■□□ 2.15
VCPKMT-203ENST00000484763 PIK3R4Q99570 1358 aa28.48■■■□□ 2.15
VCPKMT-203ENST00000484763 NCKAP5LQ9HCH0 1330 aa28.48■■■□□ 2.15
VCPKMT-203ENST00000484763 HSPA2P54652 639 aa28.46■■■□□ 2.15
VCPKMT-203ENST00000484763 PTPRUQ92729 1446 aa28.45■■■□□ 2.15
VCPKMT-203ENST00000484763 DDX10Q13206 875 aaKnown RBP28.45■■■□□ 2.14
VCPKMT-203ENST00000484763 PRAM1Q96QH2 718 aa28.45■■■□□ 2.14
VCPKMT-203ENST00000484763 XRN1Q8IZH2 1706 aaKnown RBP28.45■■■□□ 2.14
VCPKMT-203ENST00000484763 FAM135BQ49AJ0 1406 aa28.44■■■□□ 2.14
VCPKMT-203ENST00000484763 POGKQ9P215 609 aa28.43■■■□□ 2.14
VCPKMT-203ENST00000484763 SIRT1Q96EB6 747 aa28.43■■■□□ 2.14
VCPKMT-203ENST00000484763 CHD2O14647 1828 aaKnown RBP28.42■■■□□ 2.14
VCPKMT-203ENST00000484763 CDCA8Q53HL2 280 aa28.41■■■□□ 2.14
VCPKMT-203ENST00000484763 POLR3GLQ9BT43 218 aa28.41■■■□□ 2.14
VCPKMT-203ENST00000484763 PTCH1Q13635 1447 aa28.4■■■□□ 2.14
VCPKMT-203ENST00000484763 SAFB2Q14151 953 aaKnown RBP eCLIP28.39■■■□□ 2.14
VCPKMT-203ENST00000484763 AMOTL2Q9Y2J4 779 aa28.39■■■□□ 2.13
VCPKMT-203ENST00000484763 ROBO2Q9HCK4 1378 aa28.38■■■□□ 2.13
VCPKMT-203ENST00000484763 PLEKHH1Q9ULM0 1364 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms