RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 ADGRB3O60242 1522 aa23.96■■□□□ 1.43
HLA-DQB1-208ENST00000484729 NOS1P29475 1434 aa23.96■■□□□ 1.43
HLA-DQB1-208ENST00000484729 JCADQ9P266 1359 aa23.94■■□□□ 1.42
HLA-DQB1-208ENST00000484729 ANKRD30AQ9BXX3 1397 aa23.92■■□□□ 1.42
HLA-DQB1-208ENST00000484729 SLC52A1Q9NWF4 448 aa23.91■■□□□ 1.42
HLA-DQB1-208ENST00000484729 FGD6Q6ZV73 1430 aa23.89■■□□□ 1.41
HLA-DQB1-208ENST00000484729 ZFYVE9O95405 1425 aa23.87■■□□□ 1.41
HLA-DQB1-208ENST00000484729 PPP1R15AO75807 674 aaPredicted RBP23.87■■□□□ 1.41
HLA-DQB1-208ENST00000484729 LRP6O75581 1613 aa23.87■■□□□ 1.41
HLA-DQB1-208ENST00000484729 COL16A1Q07092 1604 aaPredicted RBP23.87■■□□□ 1.41
HLA-DQB1-208ENST00000484729 PLEKHG1Q9ULL1 1385 aa23.87■■□□□ 1.41
HLA-DQB1-208ENST00000484729 CHD2O14647 1828 aaKnown RBP23.87■■□□□ 1.41
HLA-DQB1-208ENST00000484729 RIMS2Q9UQ26 1411 aa23.85■■□□□ 1.41
HLA-DQB1-208ENST00000484729 MYO5BQ9ULV0 1848 aa23.84■■□□□ 1.41
HLA-DQB1-208ENST00000484729 MEX3CQ5U5Q3 659 aaKnown RBP23.84■■□□□ 1.41
HLA-DQB1-208ENST00000484729 C14orf37Q86TY3 774 aa23.84■■□□□ 1.41
HLA-DQB1-208ENST00000484729 TRIM52Q96A61 297 aa23.84■■□□□ 1.41
HLA-DQB1-208ENST00000484729 UPF1Q92900 1129 aaKnown RBP eCLIP23.82■■□□□ 1.4
HLA-DQB1-208ENST00000484729 GCC2Q8IWJ2 1684 aa23.81■■□□□ 1.4
HLA-DQB1-208ENST00000484729 NUTM2DQ5VT03 806 aaPredicted RBP23.81■■□□□ 1.4
HLA-DQB1-208ENST00000484729 TBX22Q9Y458 520 aa23.81■■□□□ 1.4
HLA-DQB1-208ENST00000484729 SPATA31A6Q5VVP1 1343 aa23.81■■□□□ 1.4
HLA-DQB1-208ENST00000484729 CHGAP10645 457 aaKnown RBP23.79■■□□□ 1.4
HLA-DQB1-208ENST00000484729 HDGFP51858 240 aaKnown RBP23.79■■□□□ 1.4
HLA-DQB1-208ENST00000484729 ZNF772Q68DY9 489 aaPredicted RBP23.79■■□□□ 1.4
HLA-DQB1-208ENST00000484729 RPRD2Q5VT52 1461 aaKnown RBP23.79■■□□□ 1.4
HLA-DQB1-208ENST00000484729 TMEM131LA2VDJ0 1609 aa23.78■■□□□ 1.4
HLA-DQB1-208ENST00000484729 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
HLA-DQB1-208ENST00000484729 ADGRL2O95490 1459 aa23.76■■□□□ 1.39
HLA-DQB1-208ENST00000484729 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
HLA-DQB1-208ENST00000484729 ATF3P18847 181 aa23.75■■□□□ 1.39
HLA-DQB1-208ENST00000484729 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
HLA-DQB1-208ENST00000484729 C19orf44Q9H6X5 657 aa23.75■■□□□ 1.39
HLA-DQB1-208ENST00000484729 ADAMTS13Q76LX8 1427 aa23.75■■□□□ 1.39
HLA-DQB1-208ENST00000484729 ANKRD50Q9ULJ7 1429 aa23.75■■□□□ 1.39
HLA-DQB1-208ENST00000484729 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
HLA-DQB1-208ENST00000484729 NUTM2BA6NNL0 878 aaPredicted RBP23.73■■□□□ 1.39
HLA-DQB1-208ENST00000484729 NUTM2EB1AL46 878 aaPredicted RBP23.73■■□□□ 1.39
HLA-DQB1-208ENST00000484729 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
HLA-DQB1-208ENST00000484729 NUTM2AQ8IVF1 878 aaPredicted RBP23.73■■□□□ 1.39
HLA-DQB1-208ENST00000484729 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.73■■□□□ 1.39
HLA-DQB1-208ENST00000484729 SHPRHQ149N8 1683 aa23.72■■□□□ 1.39
HLA-DQB1-208ENST00000484729 RXRBP28702 533 aa23.71■■□□□ 1.39
HLA-DQB1-208ENST00000484729 BRINP3Q76B58 766 aa23.7■■□□□ 1.38
HLA-DQB1-208ENST00000484729 AMOTL2Q9Y2J4 779 aa23.68■■□□□ 1.38
HLA-DQB1-208ENST00000484729 PTPRUQ92729 1446 aa23.67■■□□□ 1.38
HLA-DQB1-208ENST00000484729 DIP2AQ14689 1571 aa23.66■■□□□ 1.38
HLA-DQB1-208ENST00000484729 PIK3R4Q99570 1358 aa23.65■■□□□ 1.38
HLA-DQB1-208ENST00000484729 AFF2P51816 1311 aa23.64■■□□□ 1.38
HLA-DQB1-208ENST00000484729 E9PCH4 1651 aa23.64■■□□□ 1.37
HLA-DQB1-208ENST00000484729 UNC13BO14795 1591 aa23.62■■□□□ 1.37
HLA-DQB1-208ENST00000484729 TRPM2O94759 1503 aa23.62■■□□□ 1.37
HLA-DQB1-208ENST00000484729 ASXL1Q8IXJ9 1541 aa23.6■■□□□ 1.37
HLA-DQB1-208ENST00000484729 CDK12Q9NYV4 1490 aaPredicted RBP23.6■■□□□ 1.37
HLA-DQB1-208ENST00000484729 DDX17Q92841 729 aaKnown RBP23.58■■□□□ 1.37
HLA-DQB1-208ENST00000484729 MST1RQ04912 1400 aa23.57■■□□□ 1.36
HLA-DQB1-208ENST00000484729 SETD5Q9C0A6 1442 aa23.57■■□□□ 1.36
HLA-DQB1-208ENST00000484729 C8orf37Q96NL8 207 aa23.56■■□□□ 1.36
HLA-DQB1-208ENST00000484729 DCCP43146 1447 aa23.56■■□□□ 1.36
HLA-DQB1-208ENST00000484729 QTRT2Q9H974 415 aaKnown RBP23.55■■□□□ 1.36
HLA-DQB1-208ENST00000484729 LRRC59Q96AG4 307 aaKnown RBP23.54■■□□□ 1.36
HLA-DQB1-208ENST00000484729 RGS12O14924 1447 aa23.53■■□□□ 1.36
HLA-DQB1-208ENST00000484729 NHSL1Q5SYE7 1610 aa23.53■■□□□ 1.36
HLA-DQB1-208ENST00000484729 IQGAP3Q86VI3 1631 aa23.53■■□□□ 1.36
HLA-DQB1-208ENST00000484729 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
HLA-DQB1-208ENST00000484729 XRN1Q8IZH2 1706 aaKnown RBP23.53■■□□□ 1.36
HLA-DQB1-208ENST00000484729 NUP155O75694 1391 aa23.52■■□□□ 1.36
HLA-DQB1-208ENST00000484729 METP08581 1390 aa23.52■■□□□ 1.36
HLA-DQB1-208ENST00000484729 RBM6P78332 1123 aaKnown RBP23.5■■□□□ 1.35
HLA-DQB1-208ENST00000484729 PNPLA6Q8IY17 1366 aa23.5■■□□□ 1.35
HLA-DQB1-208ENST00000484729 SETBP1Q9Y6X0 1596 aa23.48■■□□□ 1.35
HLA-DQB1-208ENST00000484729 ADAMTS2O95450 1211 aa23.48■■□□□ 1.35
HLA-DQB1-208ENST00000484729 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
HLA-DQB1-208ENST00000484729 SRCAPQ6ZRS2 3230 aa23.46■■□□□ 1.35
HLA-DQB1-208ENST00000484729 ROCK1Q13464 1354 aa23.46■■□□□ 1.35
HLA-DQB1-208ENST00000484729 NGLY1Q96IV0 654 aa23.46■■□□□ 1.35
HLA-DQB1-208ENST00000484729 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
HLA-DQB1-208ENST00000484729 ITGAEP38570 1179 aa23.43■■□□□ 1.34
HLA-DQB1-208ENST00000484729 PPARGC1BQ86YN6 1023 aaKnown RBP23.43■■□□□ 1.34
HLA-DQB1-208ENST00000484729 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
HLA-DQB1-208ENST00000484729 C1orf167Q5SNV9 1468 aa23.39■■□□□ 1.34
HLA-DQB1-208ENST00000484729 SPHKAPQ2M3C7 1700 aa23.38■■□□□ 1.33
HLA-DQB1-208ENST00000484729 ORAI2Q96SN7 254 aa23.37■■□□□ 1.33
HLA-DQB1-208ENST00000484729 USP21Q9UK80 565 aa23.37■■□□□ 1.33
HLA-DQB1-208ENST00000484729 ATAD2Q6PL18 1390 aa23.36■■□□□ 1.33
HLA-DQB1-208ENST00000484729 NEXMIFQ5QGS0 1516 aa23.34■■□□□ 1.33
HLA-DQB1-208ENST00000484729 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.33
HLA-DQB1-208ENST00000484729 TRPC5Q9UL62 973 aaPredicted RBP23.32■■□□□ 1.32
HLA-DQB1-208ENST00000484729 CLTCL1P53675 1640 aa23.32■■□□□ 1.32
HLA-DQB1-208ENST00000484729 LAMC1P11047 1609 aa23.3■■□□□ 1.32
HLA-DQB1-208ENST00000484729 ROBO2Q9HCK4 1378 aa23.3■■□□□ 1.32
HLA-DQB1-208ENST00000484729 FNBP4Q8N3X1 1017 aaPredicted RBP23.3■■□□□ 1.32
HLA-DQB1-208ENST00000484729 ATRNO75882 1429 aa23.27■■□□□ 1.32
HLA-DQB1-208ENST00000484729 PTCH1Q13635 1447 aa23.27■■□□□ 1.32
HLA-DQB1-208ENST00000484729 ZRANB1Q9UGI0 708 aa23.27■■□□□ 1.32
HLA-DQB1-208ENST00000484729 EP400Q96L91 3159 aa23.24■■□□□ 1.31
HLA-DQB1-208ENST00000484729 COL22A1Q8NFW1 1626 aaPredicted RBP23.22■■□□□ 1.31
HLA-DQB1-208ENST00000484729 KIF1BO60333 1816 aa23.22■■□□□ 1.31
HLA-DQB1-208ENST00000484729 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
HLA-DQB1-208ENST00000484729 XPCQ01831 940 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms