RNA–Protein interactions for RNA: ENST00000484555.1

PABPC4-215, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-215ENST00000484555 RPRD2Q5VT52 1461 aaKnown RBP19.5■□□□□ 0.71
PABPC4-215ENST00000484555 JCADQ9P266 1359 aa19.5■□□□□ 0.71
PABPC4-215ENST00000484555 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
PABPC4-215ENST00000484555 ZFYVE9O95405 1425 aa19.5■□□□□ 0.71
PABPC4-215ENST00000484555 PLEKHG1Q9ULL1 1385 aa19.49■□□□□ 0.71
PABPC4-215ENST00000484555 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
PABPC4-215ENST00000484555 CHD2O14647 1828 aaKnown RBP19.48■□□□□ 0.71
PABPC4-215ENST00000484555 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
PABPC4-215ENST00000484555 PHLPP1O60346 1717 aa19.48■□□□□ 0.71
PABPC4-215ENST00000484555 HDGFP51858 240 aaKnown RBP19.48■□□□□ 0.71
PABPC4-215ENST00000484555 APLP2Q06481 763 aa19.48■□□□□ 0.71
PABPC4-215ENST00000484555 BCANQ96GW7 911 aa19.46■□□□□ 0.71
PABPC4-215ENST00000484555 TBX22Q9Y458 520 aa19.46■□□□□ 0.71
PABPC4-215ENST00000484555 TMEM131LA2VDJ0 1609 aa19.43■□□□□ 0.7
PABPC4-215ENST00000484555 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
PABPC4-215ENST00000484555 RIMS2Q9UQ26 1411 aa19.43■□□□□ 0.7
PABPC4-215ENST00000484555 SPATA31A6Q5VVP1 1343 aa19.42■□□□□ 0.7
PABPC4-215ENST00000484555 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
PABPC4-215ENST00000484555 MYO5BQ9ULV0 1848 aa19.41■□□□□ 0.7
PABPC4-215ENST00000484555 GCC2Q8IWJ2 1684 aa19.4■□□□□ 0.7
PABPC4-215ENST00000484555 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
PABPC4-215ENST00000484555 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.7
PABPC4-215ENST00000484555 PPP1R15AO75807 674 aaPredicted RBP19.39■□□□□ 0.69
PABPC4-215ENST00000484555 PIK3R4Q99570 1358 aa19.39■□□□□ 0.69
PABPC4-215ENST00000484555 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
PABPC4-215ENST00000484555 C19orf44Q9H6X5 657 aa19.38■□□□□ 0.69
PABPC4-215ENST00000484555 LRP6O75581 1613 aa19.37■□□□□ 0.69
PABPC4-215ENST00000484555 AHDC1Q5TGY3 1603 aaPredicted RBP19.37■□□□□ 0.69
PABPC4-215ENST00000484555 ADAMTS13Q76LX8 1427 aa19.37■□□□□ 0.69
PABPC4-215ENST00000484555 ZNF772Q68DY9 489 aaPredicted RBP19.37■□□□□ 0.69
PABPC4-215ENST00000484555 DIP2AQ14689 1571 aa19.36■□□□□ 0.69
PABPC4-215ENST00000484555 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.35■□□□□ 0.69
PABPC4-215ENST00000484555 SHPRHQ149N8 1683 aa19.34■□□□□ 0.69
PABPC4-215ENST00000484555 UNC13BO14795 1591 aa19.33■□□□□ 0.69
PABPC4-215ENST00000484555 ATF3P18847 181 aa19.33■□□□□ 0.68
PABPC4-215ENST00000484555 C14orf37Q86TY3 774 aa19.33■□□□□ 0.68
PABPC4-215ENST00000484555 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.68
PABPC4-215ENST00000484555 FAM50AQ14320 339 aaKnown RBP19.31■□□□□ 0.68
PABPC4-215ENST00000484555 MEX3CQ5U5Q3 659 aaKnown RBP19.31■□□□□ 0.68
PABPC4-215ENST00000484555 E9PCH4 1651 aa19.3■□□□□ 0.68
PABPC4-215ENST00000484555 CHGAP10645 457 aaKnown RBP19.3■□□□□ 0.68
PABPC4-215ENST00000484555 BRINP3Q76B58 766 aa19.29■□□□□ 0.68
PABPC4-215ENST00000484555 TRPM2O94759 1503 aa19.29■□□□□ 0.68
PABPC4-215ENST00000484555 NUTM2DQ5VT03 806 aaPredicted RBP19.28■□□□□ 0.68
PABPC4-215ENST00000484555 AMOTL2Q9Y2J4 779 aa19.28■□□□□ 0.68
PABPC4-215ENST00000484555 DCCP43146 1447 aa19.27■□□□□ 0.68
PABPC4-215ENST00000484555 PTPRUQ92729 1446 aa19.27■□□□□ 0.68
PABPC4-215ENST00000484555 RXRBP28702 533 aa19.27■□□□□ 0.68
PABPC4-215ENST00000484555 CDK12Q9NYV4 1490 aaPredicted RBP19.27■□□□□ 0.67
PABPC4-215ENST00000484555 TRIM52Q96A61 297 aa19.26■□□□□ 0.67
PABPC4-215ENST00000484555 IQGAP3Q86VI3 1631 aa19.25■□□□□ 0.67
PABPC4-215ENST00000484555 ROCK1Q13464 1354 aa19.25■□□□□ 0.67
PABPC4-215ENST00000484555 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
PABPC4-215ENST00000484555 ASXL1Q8IXJ9 1541 aa19.21■□□□□ 0.67
PABPC4-215ENST00000484555 XRN1Q8IZH2 1706 aaKnown RBP19.21■□□□□ 0.67
PABPC4-215ENST00000484555 SETBP1Q9Y6X0 1596 aa19.21■□□□□ 0.67
PABPC4-215ENST00000484555 MST1RQ04912 1400 aa19.2■□□□□ 0.66
PABPC4-215ENST00000484555 NUTM2BA6NNL0 878 aaPredicted RBP19.2■□□□□ 0.66
PABPC4-215ENST00000484555 NUTM2EB1AL46 878 aaPredicted RBP19.2■□□□□ 0.66
PABPC4-215ENST00000484555 NUTM2AQ8IVF1 878 aaPredicted RBP19.2■□□□□ 0.66
PABPC4-215ENST00000484555 NHSL1Q5SYE7 1610 aa19.2■□□□□ 0.66
PABPC4-215ENST00000484555 NRXN3Q9Y4C0 1643 aa19.2■□□□□ 0.66
PABPC4-215ENST00000484555 LRRC59Q96AG4 307 aaKnown RBP19.19■□□□□ 0.66
PABPC4-215ENST00000484555 AFF2P51816 1311 aa19.19■□□□□ 0.66
PABPC4-215ENST00000484555 NUP155O75694 1391 aa19.19■□□□□ 0.66
PABPC4-215ENST00000484555 METP08581 1390 aa19.15■□□□□ 0.66
PABPC4-215ENST00000484555 RBM6P78332 1123 aaKnown RBP19.13■□□□□ 0.65
PABPC4-215ENST00000484555 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
PABPC4-215ENST00000484555 ADGRL3Q9HAR2 1447 aa19.13■□□□□ 0.65
PABPC4-215ENST00000484555 QTRT2Q9H974 415 aaKnown RBP19.12■□□□□ 0.65
PABPC4-215ENST00000484555 RGS12O14924 1447 aa19.11■□□□□ 0.65
PABPC4-215ENST00000484555 SPHKAPQ2M3C7 1700 aa19.11■□□□□ 0.65
PABPC4-215ENST00000484555 C8orf37Q96NL8 207 aa19.1■□□□□ 0.65
PABPC4-215ENST00000484555 ZNF326Q5BKZ1 582 aaKnown RBP19.09■□□□□ 0.65
PABPC4-215ENST00000484555 LAMC1P11047 1609 aa19.09■□□□□ 0.65
PABPC4-215ENST00000484555 DDX17Q92841 729 aaKnown RBP19.08■□□□□ 0.64
PABPC4-215ENST00000484555 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.64
PABPC4-215ENST00000484555 C1orf167Q5SNV9 1468 aa19.07■□□□□ 0.64
PABPC4-215ENST00000484555 NEXMIFQ5QGS0 1516 aa19.06■□□□□ 0.64
PABPC4-215ENST00000484555 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
PABPC4-215ENST00000484555 SOS2Q07890 1332 aaPredicted RBP19.04■□□□□ 0.64
PABPC4-215ENST00000484555 PTCH1Q13635 1447 aa19.02■□□□□ 0.64
PABPC4-215ENST00000484555 CLTCL1P53675 1640 aa19.02■□□□□ 0.64
PABPC4-215ENST00000484555 PRAG1Q86YV5 1406 aa19.01■□□□□ 0.63
PABPC4-215ENST00000484555 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
PABPC4-215ENST00000484555 ITGAEP38570 1179 aa19■□□□□ 0.63
PABPC4-215ENST00000484555 FNBP4Q8N3X1 1017 aaPredicted RBP19■□□□□ 0.63
PABPC4-215ENST00000484555 ATAD2Q6PL18 1390 aa19■□□□□ 0.63
PABPC4-215ENST00000484555 SRCAPQ6ZRS2 3230 aa19■□□□□ 0.63
PABPC4-215ENST00000484555 ORAI2Q96SN7 254 aa18.99■□□□□ 0.63
PABPC4-215ENST00000484555 USP21Q9UK80 565 aa18.99■□□□□ 0.63
PABPC4-215ENST00000484555 TRPC5Q9UL62 973 aaPredicted RBP18.99■□□□□ 0.63
PABPC4-215ENST00000484555 KIF1BO60333 1816 aa18.98■□□□□ 0.63
PABPC4-215ENST00000484555 ROBO2Q9HCK4 1378 aa18.98■□□□□ 0.63
PABPC4-215ENST00000484555 VGFO15240 615 aaPredicted RBP18.98■□□□□ 0.63
PABPC4-215ENST00000484555 COL22A1Q8NFW1 1626 aaPredicted RBP18.96■□□□□ 0.63
PABPC4-215ENST00000484555 ATRNO75882 1429 aa18.96■□□□□ 0.63
PABPC4-215ENST00000484555 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
PABPC4-215ENST00000484555 RPGRIP1LQ68CZ1 1315 aa18.94■□□□□ 0.62
PABPC4-215ENST00000484555 FOXD1Q16676 465 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms