RNA–Protein interactions for RNA: ENST00000484343.2

KCNMA1-221, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2

Gene KCNMA1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-221ENST00000484343 RIMS2Q9UQ26 1411 aa17.88■□□□□ 0.45
KCNMA1-221ENST00000484343 SLIT1O75093 1534 aa17.88■□□□□ 0.45
KCNMA1-221ENST00000484343 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.87■□□□□ 0.45
KCNMA1-221ENST00000484343 LMTK3Q96Q04 1460 aa17.87■□□□□ 0.45
KCNMA1-221ENST00000484343 ARHGAP23Q9P227 1491 aa17.87■□□□□ 0.45
KCNMA1-221ENST00000484343 NEXMIFQ5QGS0 1516 aa17.87■□□□□ 0.45
KCNMA1-221ENST00000484343 IFT172Q9UG01 1749 aa17.86■□□□□ 0.45
KCNMA1-221ENST00000484343 PPLO60437 1756 aa17.86■□□□□ 0.45
KCNMA1-221ENST00000484343 ZFYVE9O95405 1425 aa17.86■□□□□ 0.45
KCNMA1-221ENST00000484343 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
KCNMA1-221ENST00000484343 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
KCNMA1-221ENST00000484343 EID1Q9Y6B2 187 aa17.85■□□□□ 0.45
KCNMA1-221ENST00000484343 TXNDC2Q86VQ3 553 aa17.84■□□□□ 0.45
KCNMA1-221ENST00000484343 ANKLE2Q86XL3 938 aa17.83■□□□□ 0.44
KCNMA1-221ENST00000484343 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
KCNMA1-221ENST00000484343 LTKP29376 864 aa17.82■□□□□ 0.44
KCNMA1-221ENST00000484343 ZEB1P37275 1124 aaPredicted RBP17.82■□□□□ 0.44
KCNMA1-221ENST00000484343 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
KCNMA1-221ENST00000484343 MYOM2P54296 1465 aa17.82■□□□□ 0.44
KCNMA1-221ENST00000484343 HSPA2P54652 639 aa17.81■□□□□ 0.44
KCNMA1-221ENST00000484343 ADGRF5Q8IZF2 1346 aa17.8■□□□□ 0.44
KCNMA1-221ENST00000484343 SCAF11Q99590 1463 aaKnown RBP17.8■□□□□ 0.44
KCNMA1-221ENST00000484343 NRXN1Q9ULB1 1477 aa17.79■□□□□ 0.44
KCNMA1-221ENST00000484343 NCKAP5LQ9HCH0 1330 aa17.77■□□□□ 0.44
KCNMA1-221ENST00000484343 PRAG1Q86YV5 1406 aa17.77■□□□□ 0.44
KCNMA1-221ENST00000484343 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.43
KCNMA1-221ENST00000484343 POLR1AO95602 1720 aaPredicted RBP17.76■□□□□ 0.43
KCNMA1-221ENST00000484343 PIK3C2GO75747 1445 aa17.75■□□□□ 0.43
KCNMA1-221ENST00000484343 NBPF8Q3BBV2 869 aa17.75■□□□□ 0.43
KCNMA1-221ENST00000484343 BCANQ96GW7 911 aa17.74■□□□□ 0.43
KCNMA1-221ENST00000484343 MED14O60244 1454 aa17.74■□□□□ 0.43
KCNMA1-221ENST00000484343 SETBP1Q9Y6X0 1596 aa17.73■□□□□ 0.43
KCNMA1-221ENST00000484343 STRCQ7RTU9 1775 aa17.73■□□□□ 0.43
KCNMA1-221ENST00000484343 C14orf93Q9H972 538 aaKnown RBP17.72■□□□□ 0.43
KCNMA1-221ENST00000484343 NPHP4O75161 1426 aaPredicted RBP17.72■□□□□ 0.43
KCNMA1-221ENST00000484343 SENP3Q9H4L4 574 aaPredicted RBP17.71■□□□□ 0.43
KCNMA1-221ENST00000484343 KIAA1210Q9ULL0 1709 aa17.7■□□□□ 0.42
KCNMA1-221ENST00000484343 NRXN3Q9Y4C0 1643 aa17.7■□□□□ 0.42
KCNMA1-221ENST00000484343 CFAP70Q5T0N1 1121 aa17.7■□□□□ 0.42
KCNMA1-221ENST00000484343 ALKQ9UM73 1620 aa17.69■□□□□ 0.42
KCNMA1-221ENST00000484343 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
KCNMA1-221ENST00000484343 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
KCNMA1-221ENST00000484343 ADAMTS13Q76LX8 1427 aa17.69■□□□□ 0.42
KCNMA1-221ENST00000484343 LAMC1P11047 1609 aa17.69■□□□□ 0.42
KCNMA1-221ENST00000484343 SLC26A8Q96RN1 970 aa17.68■□□□□ 0.42
KCNMA1-221ENST00000484343 TRPM1Q7Z4N2 1603 aa17.68■□□□□ 0.42
KCNMA1-221ENST00000484343 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
KCNMA1-221ENST00000484343 DIP2AQ14689 1571 aa17.66■□□□□ 0.42
KCNMA1-221ENST00000484343 NBPF1Q3BBV0 1214 aa17.66■□□□□ 0.42
KCNMA1-221ENST00000484343 DMRT2Q9Y5R5 561 aa17.66■□□□□ 0.42
KCNMA1-221ENST00000484343 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
KCNMA1-221ENST00000484343 TMEM132EQ6IEE7 984 aa17.64■□□□□ 0.41
KCNMA1-221ENST00000484343 ROCK2O75116 1388 aaKnown RBP17.64■□□□□ 0.41
KCNMA1-221ENST00000484343 METP08581 1390 aa17.63■□□□□ 0.41
KCNMA1-221ENST00000484343 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
KCNMA1-221ENST00000484343 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
KCNMA1-221ENST00000484343 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
KCNMA1-221ENST00000484343 CARD11Q9BXL7 1154 aa17.61■□□□□ 0.41
KCNMA1-221ENST00000484343 ASXL1Q8IXJ9 1541 aa17.6■□□□□ 0.41
KCNMA1-221ENST00000484343 YTHDC2Q9H6S0 1430 aaKnown RBP17.58■□□□□ 0.41
KCNMA1-221ENST00000484343 LRPPRCP42704 1394 aaKnown RBP17.58■□□□□ 0.4
KCNMA1-221ENST00000484343 STK26Q9P289 416 aa17.58■□□□□ 0.4
KCNMA1-221ENST00000484343 CHD2O14647 1828 aaKnown RBP17.58■□□□□ 0.4
KCNMA1-221ENST00000484343 PTPRUQ92729 1446 aa17.56■□□□□ 0.4
KCNMA1-221ENST00000484343 ABCC11Q96J66 1382 aa17.56■□□□□ 0.4
KCNMA1-221ENST00000484343 KCNA6P17658 529 aa17.56■□□□□ 0.4
KCNMA1-221ENST00000484343 AMOTL2Q9Y2J4 779 aa17.56■□□□□ 0.4
KCNMA1-221ENST00000484343 TRAK1Q9UPV9 953 aa17.55■□□□□ 0.4
KCNMA1-221ENST00000484343 SIRT1Q96EB6 747 aa17.54■□□□□ 0.4
KCNMA1-221ENST00000484343 TECPR2O15040 1411 aa17.53■□□□□ 0.4
KCNMA1-221ENST00000484343 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.4
KCNMA1-221ENST00000484343 XRN1Q8IZH2 1706 aaKnown RBP17.52■□□□□ 0.39
KCNMA1-221ENST00000484343 USP47Q96K76 1375 aa17.52■□□□□ 0.39
KCNMA1-221ENST00000484343 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
KCNMA1-221ENST00000484343 NWD1Q149M9 1564 aa17.51■□□□□ 0.39
KCNMA1-221ENST00000484343 DLC1Q96QB1 1528 aa17.51■□□□□ 0.39
KCNMA1-221ENST00000484343 EIF3AQ14152 1382 aaKnown RBP17.51■□□□□ 0.39
KCNMA1-221ENST00000484343 PTCH1Q13635 1447 aa17.49■□□□□ 0.39
KCNMA1-221ENST00000484343 FAM135BQ49AJ0 1406 aa17.49■□□□□ 0.39
KCNMA1-221ENST00000484343 CPS1P31327 1500 aa17.49■□□□□ 0.39
KCNMA1-221ENST00000484343 ROBO2Q9HCK4 1378 aa17.49■□□□□ 0.39
KCNMA1-221ENST00000484343 ARHGEF28Q8N1W1 1705 aaKnown RBP17.49■□□□□ 0.39
KCNMA1-221ENST00000484343 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
KCNMA1-221ENST00000484343 STRCP1A6NGW2 1772 aa17.48■□□□□ 0.39
KCNMA1-221ENST00000484343 PRAM1Q96QH2 718 aa17.48■□□□□ 0.39
KCNMA1-221ENST00000484343 POGKQ9P215 609 aa17.48■□□□□ 0.39
KCNMA1-221ENST00000484343 ST20-MTHFSA0A0A6YYL1 179 aa17.47■□□□□ 0.39
KCNMA1-221ENST00000484343 HSPA5P11021 654 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-221ENST00000484343 WAPLQ7Z5K2 1190 aa17.47■□□□□ 0.39
KCNMA1-221ENST00000484343 NKTRP30414 1462 aaKnown RBP17.47■□□□□ 0.39
KCNMA1-221ENST00000484343 CENPJQ9HC77 1338 aaPredicted RBP17.47■□□□□ 0.39
KCNMA1-221ENST00000484343 PROSER2Q86WR7 435 aaPredicted RBP17.46■□□□□ 0.39
KCNMA1-221ENST00000484343 PLEKHH1Q9ULM0 1364 aa17.44■□□□□ 0.38
KCNMA1-221ENST00000484343 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
KCNMA1-221ENST00000484343 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
KCNMA1-221ENST00000484343 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
KCNMA1-221ENST00000484343 TESK2Q96S53 571 aa17.41■□□□□ 0.38
KCNMA1-221ENST00000484343 HIRIP3Q9BW71 556 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-221ENST00000484343 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
KCNMA1-221ENST00000484343 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms