RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 RGL3Q3MIN7 710 aa8.89□□□□□ -0.99
ABCA13-206ENST00000484268 CANXP27824 592 aaKnown RBP8.89□□□□□ -0.99
ABCA13-206ENST00000484268 ZSCAN30Q86W11 494 aa8.89□□□□□ -0.99
ABCA13-206ENST00000484268 PER1O15534 1290 aaPredicted RBP8.88□□□□□ -0.99
ABCA13-206ENST00000484268 MFAP1P55081 439 aaKnown RBP8.88□□□□□ -0.99
ABCA13-206ENST00000484268 GOLGA2Q08379 1002 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 NBPF1Q3BBV0 1214 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 TNNQ9UQP3 1299 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 DMRT2Q9Y5R5 561 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 UHRF1BP1Q6BDS2 1440 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 ROCK1Q13464 1354 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 WDR43Q15061 677 aaKnown RBP eCLIP8.88□□□□□ -0.99
ABCA13-206ENST00000484268 PPP1R9BQ96SB3 815 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 CHMP4AQ9BY43 222 aa8.88□□□□□ -0.99
ABCA13-206ENST00000484268 CCDC173Q0VFZ6 552 aa8.87□□□□□ -0.99
ABCA13-206ENST00000484268 UTP14CQ5TAP6 766 aaKnown RBP8.87□□□□□ -0.99
ABCA13-206ENST00000484268 MTERF4Q7Z6M4 381 aaKnown RBP8.87□□□□□ -0.99
ABCA13-206ENST00000484268 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
ABCA13-206ENST00000484268 R3HCC1Q9Y3T6 440 aaKnown RBP8.87□□□□□ -0.99
ABCA13-206ENST00000484268 CDK13Q14004 1512 aaKnown RBP8.86□□□□□ -0.99
ABCA13-206ENST00000484268 CLUAP1Q96AJ1 413 aa8.86□□□□□ -0.99
ABCA13-206ENST00000484268 ZNF608Q9ULD9 1512 aaPredicted RBP8.86□□□□□ -0.99
ABCA13-206ENST00000484268 PZPP20742 1482 aa8.86□□□□□ -0.99
ABCA13-206ENST00000484268 MRC2Q9UBG0 1479 aa8.86□□□□□ -0.99
ABCA13-206ENST00000484268 APAF1O14727 1248 aa8.85□□□□□ -0.99
ABCA13-206ENST00000484268 ZNF521Q96K83 1311 aa8.85□□□□□ -0.99
ABCA13-206ENST00000484268 DMTNQ08495 405 aa8.85□□□□□ -0.99
ABCA13-206ENST00000484268 ZMYM3Q14202 1370 aa8.85□□□□□ -0.99
ABCA13-206ENST00000484268 DAPK1P53355 1430 aa8.85□□□□□ -0.99
ABCA13-206ENST00000484268 MSNP26038 577 aaKnown RBP8.85□□□□□ -0.99
ABCA13-206ENST00000484268 NEUROD2Q15784 382 aa8.85□□□□□ -0.99
ABCA13-206ENST00000484268 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
ABCA13-206ENST00000484268 ABCC5O15440 1437 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 CTTNBP2Q8WZ74 1663 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 GAPVD1Q14C86 1478 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 SLFN5Q08AF3 891 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 PDZRN3Q9UPQ7 1066 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 PCDHB15Q9Y5E8 787 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 FANCD2Q9BXW9 1451 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 DISP3Q9P2K9 1392 aa8.84□□□□□ -0.99
ABCA13-206ENST00000484268 BBXQ8WY36 941 aaPredicted RBP8.83□□□□□ -1
ABCA13-206ENST00000484268 KIAA1107Q9UPP5 1409 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 CCDC144AA2RUR9 1427 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 UQCRHLA0A096LP55 91 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 DYNC1I1O14576 645 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 UQCRHP07919 91 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 XPCQ01831 940 aaPredicted RBP8.83□□□□□ -1
ABCA13-206ENST00000484268 SKOR2Q2VWA4 1001 aaPredicted RBP8.83□□□□□ -1
ABCA13-206ENST00000484268 SAMD9Q5K651 1589 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 JARID2Q92833 1246 aaPredicted RBP8.83□□□□□ -1
ABCA13-206ENST00000484268 CGNL1Q0VF96 1302 aa8.83□□□□□ -1
ABCA13-206ENST00000484268 NCLP19338 710 aaKnown RBP8.82□□□□□ -1
ABCA13-206ENST00000484268 GTF2E1P29083 439 aaPredicted RBP8.82□□□□□ -1
ABCA13-206ENST00000484268 TRMT2AQ8IZ69 625 aaKnown RBP8.82□□□□□ -1
ABCA13-206ENST00000484268 C22orf23Q9BZE7 217 aa8.82□□□□□ -1
ABCA13-206ENST00000484268 DDIT3P35638 169 aa8.82□□□□□ -1
ABCA13-206ENST00000484268 NASPP49321 788 aaPredicted RBP8.82□□□□□ -1
ABCA13-206ENST00000484268 TNPO1Q92973 898 aaKnown RBP8.82□□□□□ -1
ABCA13-206ENST00000484268 RTEL1-TNFRSF6BF6WH68 1400 aa8.82□□□□□ -1
ABCA13-206ENST00000484268 ZNF500O60304 480 aaPredicted RBP8.82□□□□□ -1
ABCA13-206ENST00000484268 RLBP1P12271 317 aa8.82□□□□□ -1
ABCA13-206ENST00000484268 HS1BP3Q53T59 392 aa8.82□□□□□ -1
ABCA13-206ENST00000484268 TDRD9Q8NDG6 1382 aaKnown RBP8.81□□□□□ -1
ABCA13-206ENST00000484268 ZSCAN20P17040 1043 aaPredicted RBP8.81□□□□□ -1
ABCA13-206ENST00000484268 PPP2R1AP30153 589 aa8.81□□□□□ -1
ABCA13-206ENST00000484268 ANP32BQ92688 251 aaKnown RBP8.81□□□□□ -1
ABCA13-206ENST00000484268 DNMBPQ6XZF7 1577 aa8.81□□□□□ -1
ABCA13-206ENST00000484268 PTMSP20962 102 aa8.81□□□□□ -1
ABCA13-206ENST00000484268 CCDC94Q9BW85 323 aaPredicted RBP8.81□□□□□ -1
ABCA13-206ENST00000484268 RRP7AQ9Y3A4 280 aaKnown RBP8.81□□□□□ -1
ABCA13-206ENST00000484268 NCOA3Q9Y6Q9 1424 aa8.81□□□□□ -1
ABCA13-206ENST00000484268 MAPK8IP2Q13387 824 aaPredicted RBP8.8□□□□□ -1
ABCA13-206ENST00000484268 PDE3AQ14432 1141 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 STAC3Q96MF2 364 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 CAMSAP2Q08AD1 1489 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 NUP155O75694 1391 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 TSC1Q92574 1164 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 SCAPERQ9BY12 1400 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 ARHGEF12Q9NZN5 1544 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 CLASP1Q7Z460 1538 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 NKTRP30414 1462 aaKnown RBP8.8□□□□□ -1
ABCA13-206ENST00000484268 HSCBQ8IWL3 235 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 GBP4Q96PP9 640 aa8.8□□□□□ -1
ABCA13-206ENST00000484268 NOL7Q9UMY1 257 aaKnown RBP8.8□□□□□ -1
ABCA13-206ENST00000484268 KIAA0586Q9BVV6 1533 aa8.79□□□□□ -1
ABCA13-206ENST00000484268 ERCC6Q03468 1493 aa8.79□□□□□ -1
ABCA13-206ENST00000484268 MPNDQ8N594 471 aa8.79□□□□□ -1
ABCA13-206ENST00000484268 EPRSP07814 1512 aaKnown RBP8.79□□□□□ -1
ABCA13-206ENST00000484268 URB2Q14146 1524 aaKnown RBP8.79□□□□□ -1
ABCA13-206ENST00000484268 NINLQ9Y2I6 1382 aa8.79□□□□□ -1
ABCA13-206ENST00000484268 DNMT1P26358 1616 aaKnown RBP8.79□□□□□ -1
ABCA13-206ENST00000484268 PPP4R3BQ5MIZ7 849 aa8.79□□□□□ -1
ABCA13-206ENST00000484268 CIZ1Q9ULV3 898 aaPredicted RBP8.79□□□□□ -1
ABCA13-206ENST00000484268 CSPP1Q1MSJ5 1256 aa8.78□□□□□ -1
ABCA13-206ENST00000484268 PMFBP1Q8TBY8 1022 aa8.78□□□□□ -1
ABCA13-206ENST00000484268 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.78□□□□□ -1
ABCA13-206ENST00000484268 NAP1L2Q9ULW6 460 aaPredicted RBP8.78□□□□□ -1
ABCA13-206ENST00000484268 CUL7Q14999 1698 aa8.78□□□□□ -1
ABCA13-206ENST00000484268 IBTKQ9P2D0 1353 aaPredicted RBP8.78□□□□□ -1
ABCA13-206ENST00000484268 TNNT2P45379 298 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms