RNA–Protein interactions for RNA: ENST00000483974.5

C4A-255, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-255ENST00000483974 SOCS7O14512 581 aa31.36■■■□□ 2.61
C4A-255ENST00000483974 TMEM131LA2VDJ0 1609 aa31.35■■■□□ 2.61
C4A-255ENST00000483974 TRIM26Q12899 539 aaPredicted RBP31.35■■■□□ 2.61
C4A-255ENST00000483974 ZFYVE9O95405 1425 aa31.33■■■□□ 2.61
C4A-255ENST00000483974 NUP155O75694 1391 aa31.32■■■□□ 2.6
C4A-255ENST00000483974 SLC26A8Q96RN1 970 aa31.32■■■□□ 2.6
C4A-255ENST00000483974 NKTRP30414 1462 aaKnown RBP31.32■■■□□ 2.6
C4A-255ENST00000483974 NAIPQ13075 1403 aa31.32■■■□□ 2.6
C4A-255ENST00000483974 PLEKHG1Q9ULL1 1385 aa31.31■■■□□ 2.6
C4A-255ENST00000483974 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.31■■■□□ 2.6
C4A-255ENST00000483974 BCANQ96GW7 911 aa31.31■■■□□ 2.6
C4A-255ENST00000483974 NWD1Q149M9 1564 aa31.3■■■□□ 2.6
C4A-255ENST00000483974 PPP1R15AO75807 674 aaPredicted RBP31.3■■■□□ 2.6
C4A-255ENST00000483974 RIMS2Q9UQ26 1411 aa31.3■■■□□ 2.6
C4A-255ENST00000483974 MED1Q15648 1581 aaPredicted RBP31.3■■■□□ 2.6
C4A-255ENST00000483974 TMEM94Q12767 1356 aa31.28■■■□□ 2.6
C4A-255ENST00000483974 HFM1A2PYH4 1435 aa31.26■■■□□ 2.6
C4A-255ENST00000483974 PROSER2Q86WR7 435 aaPredicted RBP31.26■■■□□ 2.59
C4A-255ENST00000483974 CHD2O14647 1828 aaKnown RBP31.26■■■□□ 2.59
C4A-255ENST00000483974 CHGAP10645 457 aaKnown RBP31.23■■■□□ 2.59
C4A-255ENST00000483974 FAM135BQ49AJ0 1406 aa31.22■■■□□ 2.59
C4A-255ENST00000483974 TBX22Q9Y458 520 aa31.2■■■□□ 2.59
C4A-255ENST00000483974 DIP2AQ14689 1571 aa31.19■■■□□ 2.58
C4A-255ENST00000483974 SPHKAPQ2M3C7 1700 aa31.18■■■□□ 2.58
C4A-255ENST00000483974 MSH6P52701 1360 aa31.17■■■□□ 2.58
C4A-255ENST00000483974 PIK3R4Q99570 1358 aa31.15■■■□□ 2.58
C4A-255ENST00000483974 NCOA3Q9Y6Q9 1424 aa31.14■■■□□ 2.58
C4A-255ENST00000483974 PHF23Q9BUL5 403 aaPredicted RBP31.13■■■□□ 2.57
C4A-255ENST00000483974 PCGF6Q9BYE7 350 aa31.13■■■□□ 2.57
C4A-255ENST00000483974 SETD5Q9C0A6 1442 aa31.12■■■□□ 2.57
C4A-255ENST00000483974 ROBO1Q9Y6N7 1651 aa31.1■■■□□ 2.57
C4A-255ENST00000483974 SENP3Q9H4L4 574 aaPredicted RBP31.1■■■□□ 2.57
C4A-255ENST00000483974 ADAMTS13Q76LX8 1427 aa31.09■■■□□ 2.57
C4A-255ENST00000483974 RAB3GAP2Q9H2M9 1393 aa31.08■■■□□ 2.57
C4A-255ENST00000483974 TRPM2O94759 1503 aa31.07■■■□□ 2.56
C4A-255ENST00000483974 RBM33Q96EV2 1170 aaKnown RBP31.05■■■□□ 2.56
C4A-255ENST00000483974 NUTM2DQ5VT03 806 aaPredicted RBP31.04■■■□□ 2.56
C4A-255ENST00000483974 SLAIN2Q9P270 581 aa31.03■■■□□ 2.56
C4A-255ENST00000483974 KIF1BO60333 1816 aa31.01■■■□□ 2.56
C4A-255ENST00000483974 ZNF326Q5BKZ1 582 aaKnown RBP30.99■■■□□ 2.55
C4A-255ENST00000483974 SETBP1Q9Y6X0 1596 aa30.99■■■□□ 2.55
C4A-255ENST00000483974 C14orf37Q86TY3 774 aa30.98■■■□□ 2.55
C4A-255ENST00000483974 C19orf44Q9H6X5 657 aa30.96■■■□□ 2.55
C4A-255ENST00000483974 CLTCL1P53675 1640 aa30.95■■■□□ 2.55
C4A-255ENST00000483974 CADPS2Q86UW7 1296 aa30.95■■■□□ 2.55
C4A-255ENST00000483974 PHLPP1O60346 1717 aa30.94■■■□□ 2.54
C4A-255ENST00000483974 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.94■■■□□ 2.54
C4A-255ENST00000483974 AMOTL2Q9Y2J4 779 aa30.94■■■□□ 2.54
C4A-255ENST00000483974 NRXN3Q9Y4C0 1643 aa30.94■■■□□ 2.54
C4A-255ENST00000483974 ATF3P18847 181 aa30.91■■■□□ 2.54
C4A-255ENST00000483974 TRIM52Q96A61 297 aa30.9■■■□□ 2.54
C4A-255ENST00000483974 XRN1Q8IZH2 1706 aaKnown RBP30.9■■■□□ 2.54
C4A-255ENST00000483974 NEXMIFQ5QGS0 1516 aa30.88■■■□□ 2.53
C4A-255ENST00000483974 DCCP43146 1447 aa30.88■■■□□ 2.53
C4A-255ENST00000483974 PTPRUQ92729 1446 aa30.88■■■□□ 2.53
C4A-255ENST00000483974 JCADQ9P266 1359 aa30.85■■■□□ 2.53
C4A-255ENST00000483974 SLC4A1APQ9BWU0 796 aaKnown RBP30.84■■■□□ 2.53
C4A-255ENST00000483974 VGFO15240 615 aaPredicted RBP30.81■■■□□ 2.52
C4A-255ENST00000483974 HRCP23327 699 aa30.81■■■□□ 2.52
C4A-255ENST00000483974 COL16A1Q07092 1604 aaPredicted RBP30.8■■■□□ 2.52
C4A-255ENST00000483974 RPGRIP1LQ68CZ1 1315 aa30.8■■■□□ 2.52
C4A-255ENST00000483974 AHDC1Q5TGY3 1603 aaPredicted RBP30.8■■■□□ 2.52
C4A-255ENST00000483974 METP08581 1390 aa30.79■■■□□ 2.52
C4A-255ENST00000483974 RGS17Q9UGC6 210 aaPredicted RBP30.78■■■□□ 2.52
C4A-255ENST00000483974 ACIN1Q9UKV3 1341 aaKnown RBP30.75■■■□□ 2.51
C4A-255ENST00000483974 PPLO60437 1756 aa30.73■■■□□ 2.51
C4A-255ENST00000483974 SPATA31A6Q5VVP1 1343 aa30.73■■■□□ 2.51
C4A-255ENST00000483974 FOXD1Q16676 465 aa30.72■■■□□ 2.51
C4A-255ENST00000483974 MPHOSPH9Q99550 1183 aa30.71■■■□□ 2.51
C4A-255ENST00000483974 ADGRL3Q9HAR2 1447 aa30.71■■■□□ 2.51
C4A-255ENST00000483974 SHPRHQ149N8 1683 aa30.71■■■□□ 2.51
C4A-255ENST00000483974 BRINP3Q76B58 766 aa30.69■■■□□ 2.5
C4A-255ENST00000483974 SETD1AO15047 1707 aaKnown RBP30.69■■■□□ 2.5
C4A-255ENST00000483974 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
C4A-255ENST00000483974 DHX57Q6P158 1386 aaKnown RBP30.67■■■□□ 2.5
C4A-255ENST00000483974 MST1RQ04912 1400 aa30.67■■■□□ 2.5
C4A-255ENST00000483974 ASXL1Q8IXJ9 1541 aa30.66■■■□□ 2.5
C4A-255ENST00000483974 CCDC144AA2RUR9 1427 aa30.65■■■□□ 2.5
C4A-255ENST00000483974 PRAG1Q86YV5 1406 aa30.65■■■□□ 2.5
C4A-255ENST00000483974 NALCNQ8IZF0 1738 aa30.65■■■□□ 2.5
C4A-255ENST00000483974 NHSL1Q5SYE7 1610 aa30.63■■■□□ 2.49
C4A-255ENST00000483974 POTEAQ6S8J7 498 aa30.61■■■□□ 2.49
C4A-255ENST00000483974 MEX3CQ5U5Q3 659 aaKnown RBP30.58■■■□□ 2.49
C4A-255ENST00000483974 ANKRD30BQ9BXX2 1392 aa30.56■■■□□ 2.48
C4A-255ENST00000483974 LRRC59Q96AG4 307 aaKnown RBP30.56■■■□□ 2.48
C4A-255ENST00000483974 ZNF772Q68DY9 489 aaPredicted RBP30.55■■■□□ 2.48
C4A-255ENST00000483974 LRP6O75581 1613 aa30.55■■■□□ 2.48
C4A-255ENST00000483974 ROBO2Q9HCK4 1378 aa30.54■■■□□ 2.48
C4A-255ENST00000483974 IFT172Q9UG01 1749 aa30.53■■■□□ 2.48
C4A-255ENST00000483974 SPATA31E1Q6ZUB1 1445 aa30.53■■■□□ 2.48
C4A-255ENST00000483974 C1orf167Q5SNV9 1468 aa30.51■■■□□ 2.48
C4A-255ENST00000483974 LAMC1P11047 1609 aa30.5■■■□□ 2.47
C4A-255ENST00000483974 RGL3Q3MIN7 710 aa30.48■■■□□ 2.47
C4A-255ENST00000483974 ADGRF5Q8IZF2 1346 aa30.46■■■□□ 2.47
C4A-255ENST00000483974 TECPR2O15040 1411 aa30.43■■■□□ 2.46
C4A-255ENST00000483974 CDC42BPGQ6DT37 1551 aa30.42■■■□□ 2.46
C4A-255ENST00000483974 NUTM2BA6NNL0 878 aaPredicted RBP30.42■■■□□ 2.46
C4A-255ENST00000483974 NUTM2EB1AL46 878 aaPredicted RBP30.42■■■□□ 2.46
C4A-255ENST00000483974 NUTM2AQ8IVF1 878 aaPredicted RBP30.42■■■□□ 2.46
C4A-255ENST00000483974 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms