RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
NR1H3-222ENST00000483882 TMEM94Q12767 1356 aa22.46■■□□□ 1.19
NR1H3-222ENST00000483882 UNC13BO14795 1591 aa22.45■■□□□ 1.18
NR1H3-222ENST00000483882 PROSER2Q86WR7 435 aaPredicted RBP22.44■■□□□ 1.18
NR1H3-222ENST00000483882 PPP1R15AO75807 674 aaPredicted RBP22.43■■□□□ 1.18
NR1H3-222ENST00000483882 CHGAP10645 457 aaKnown RBP22.43■■□□□ 1.18
NR1H3-222ENST00000483882 RBM33Q96EV2 1170 aaKnown RBP22.43■■□□□ 1.18
NR1H3-222ENST00000483882 GCC2Q8IWJ2 1684 aa22.42■■□□□ 1.18
NR1H3-222ENST00000483882 HFM1A2PYH4 1435 aa22.42■■□□□ 1.18
NR1H3-222ENST00000483882 RIMS2Q9UQ26 1411 aa22.41■■□□□ 1.18
NR1H3-222ENST00000483882 HDGFP51858 240 aaKnown RBP22.41■■□□□ 1.18
NR1H3-222ENST00000483882 ZFYVE9O95405 1425 aa22.4■■□□□ 1.18
NR1H3-222ENST00000483882 PLEKHG1Q9ULL1 1385 aa22.38■■□□□ 1.17
NR1H3-222ENST00000483882 NWD1Q149M9 1564 aa22.38■■□□□ 1.17
NR1H3-222ENST00000483882 NKTRP30414 1462 aaKnown RBP22.38■■□□□ 1.17
NR1H3-222ENST00000483882 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
NR1H3-222ENST00000483882 MYO5BQ9ULV0 1848 aa22.38■■□□□ 1.17
NR1H3-222ENST00000483882 E9PCH4 1651 aa22.37■■□□□ 1.17
NR1H3-222ENST00000483882 FAM135BQ49AJ0 1406 aa22.37■■□□□ 1.17
NR1H3-222ENST00000483882 NUP155O75694 1391 aa22.37■■□□□ 1.17
NR1H3-222ENST00000483882 IQGAP3Q86VI3 1631 aa22.36■■□□□ 1.17
NR1H3-222ENST00000483882 TRIM26Q12899 539 aaPredicted RBP22.35■■□□□ 1.17
NR1H3-222ENST00000483882 NUTM2DQ5VT03 806 aaPredicted RBP22.35■■□□□ 1.17
NR1H3-222ENST00000483882 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.35■■□□□ 1.17
NR1H3-222ENST00000483882 MSH6P52701 1360 aa22.34■■□□□ 1.17
NR1H3-222ENST00000483882 SETD5Q9C0A6 1442 aa22.31■■□□□ 1.16
NR1H3-222ENST00000483882 ROBO1Q9Y6N7 1651 aa22.3■■□□□ 1.16
NR1H3-222ENST00000483882 TBX22Q9Y458 520 aa22.3■■□□□ 1.16
NR1H3-222ENST00000483882 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
NR1H3-222ENST00000483882 ADAMTS13Q76LX8 1427 aa22.26■■□□□ 1.15
NR1H3-222ENST00000483882 C14orf37Q86TY3 774 aa22.26■■□□□ 1.15
NR1H3-222ENST00000483882 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
NR1H3-222ENST00000483882 SLAIN2Q9P270 581 aa22.25■■□□□ 1.15
NR1H3-222ENST00000483882 DIP2AQ14689 1571 aa22.23■■□□□ 1.15
NR1H3-222ENST00000483882 RGS17Q9UGC6 210 aaPredicted RBP22.22■■□□□ 1.15
NR1H3-222ENST00000483882 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
NR1H3-222ENST00000483882 ZNF326Q5BKZ1 582 aaKnown RBP22.2■■□□□ 1.14
NR1H3-222ENST00000483882 NCOA3Q9Y6Q9 1424 aa22.2■■□□□ 1.14
NR1H3-222ENST00000483882 TRPM2O94759 1503 aa22.19■■□□□ 1.14
NR1H3-222ENST00000483882 SPHKAPQ2M3C7 1700 aa22.18■■□□□ 1.14
NR1H3-222ENST00000483882 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
NR1H3-222ENST00000483882 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
NR1H3-222ENST00000483882 AMOTL2Q9Y2J4 779 aa22.17■■□□□ 1.14
NR1H3-222ENST00000483882 ATF3P18847 181 aa22.16■■□□□ 1.14
NR1H3-222ENST00000483882 HRCP23327 699 aa22.16■■□□□ 1.14
NR1H3-222ENST00000483882 CADPS2Q86UW7 1296 aa22.15■■□□□ 1.14
NR1H3-222ENST00000483882 C19orf44Q9H6X5 657 aa22.15■■□□□ 1.14
NR1H3-222ENST00000483882 PTPRUQ92729 1446 aa22.14■■□□□ 1.14
NR1H3-222ENST00000483882 JCADQ9P266 1359 aa22.14■■□□□ 1.14
NR1H3-222ENST00000483882 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.12■■□□□ 1.13
NR1H3-222ENST00000483882 POTEAQ6S8J7 498 aa22.11■■□□□ 1.13
NR1H3-222ENST00000483882 NRXN3Q9Y4C0 1643 aa22.1■■□□□ 1.13
NR1H3-222ENST00000483882 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
NR1H3-222ENST00000483882 SETBP1Q9Y6X0 1596 aa22.1■■□□□ 1.13
NR1H3-222ENST00000483882 CLTCL1P53675 1640 aa22.09■■□□□ 1.13
NR1H3-222ENST00000483882 COL16A1Q07092 1604 aaPredicted RBP22.09■■□□□ 1.13
NR1H3-222ENST00000483882 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
NR1H3-222ENST00000483882 SLC4A1APQ9BWU0 796 aaKnown RBP22.08■■□□□ 1.13
NR1H3-222ENST00000483882 METP08581 1390 aa22.07■■□□□ 1.12
NR1H3-222ENST00000483882 XRN1Q8IZH2 1706 aaKnown RBP22.06■■□□□ 1.12
NR1H3-222ENST00000483882 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
NR1H3-222ENST00000483882 ACIN1Q9UKV3 1341 aaKnown RBP22.06■■□□□ 1.12
NR1H3-222ENST00000483882 FOXD1Q16676 465 aa22.04■■□□□ 1.12
NR1H3-222ENST00000483882 BRINP3Q76B58 766 aa22.04■■□□□ 1.12
NR1H3-222ENST00000483882 AHDC1Q5TGY3 1603 aaPredicted RBP22.04■■□□□ 1.12
NR1H3-222ENST00000483882 DCCP43146 1447 aa22.03■■□□□ 1.12
NR1H3-222ENST00000483882 SPATA31A6Q5VVP1 1343 aa22.03■■□□□ 1.12
NR1H3-222ENST00000483882 MEX3CQ5U5Q3 659 aaKnown RBP22.02■■□□□ 1.12
NR1H3-222ENST00000483882 KIF1BO60333 1816 aa22.01■■□□□ 1.11
NR1H3-222ENST00000483882 LRP6O75581 1613 aa22■■□□□ 1.11
NR1H3-222ENST00000483882 MST1RQ04912 1400 aa21.98■■□□□ 1.11
NR1H3-222ENST00000483882 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
NR1H3-222ENST00000483882 ADGRL3Q9HAR2 1447 aa21.97■■□□□ 1.11
NR1H3-222ENST00000483882 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
NR1H3-222ENST00000483882 SHPRHQ149N8 1683 aa21.96■■□□□ 1.11
NR1H3-222ENST00000483882 NUTM2BA6NNL0 878 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-222ENST00000483882 NUTM2EB1AL46 878 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-222ENST00000483882 NUTM2AQ8IVF1 878 aaPredicted RBP21.95■■□□□ 1.1
NR1H3-222ENST00000483882 RPGRIP1LQ68CZ1 1315 aa21.93■■□□□ 1.1
NR1H3-222ENST00000483882 NALCNQ8IZF0 1738 aa21.92■■□□□ 1.1
NR1H3-222ENST00000483882 ZNF772Q68DY9 489 aaPredicted RBP21.92■■□□□ 1.1
NR1H3-222ENST00000483882 DHX57Q6P158 1386 aaKnown RBP21.9■■□□□ 1.1
NR1H3-222ENST00000483882 DDX17Q92841 729 aaKnown RBP21.9■■□□□ 1.1
NR1H3-222ENST00000483882 NHSL1Q5SYE7 1610 aa21.9■■□□□ 1.1
NR1H3-222ENST00000483882 PTCH1Q13635 1447 aa21.89■■□□□ 1.1
NR1H3-222ENST00000483882 SETD1AO15047 1707 aaKnown RBP21.89■■□□□ 1.1
NR1H3-222ENST00000483882 ANKRD30BQ9BXX2 1392 aa21.89■■□□□ 1.1
NR1H3-222ENST00000483882 LRRC59Q96AG4 307 aaKnown RBP21.89■■□□□ 1.09
NR1H3-222ENST00000483882 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
NR1H3-222ENST00000483882 C1orf167Q5SNV9 1468 aa21.86■■□□□ 1.09
NR1H3-222ENST00000483882 PPLO60437 1756 aa21.85■■□□□ 1.09
NR1H3-222ENST00000483882 CCDC144AA2RUR9 1427 aa21.85■■□□□ 1.09
NR1H3-222ENST00000483882 RGL3Q3MIN7 710 aa21.83■■□□□ 1.09
NR1H3-222ENST00000483882 PNPLA6Q8IY17 1366 aa21.83■■□□□ 1.08
NR1H3-222ENST00000483882 AFF2P51816 1311 aa21.82■■□□□ 1.08
NR1H3-222ENST00000483882 PRAG1Q86YV5 1406 aa21.81■■□□□ 1.08
NR1H3-222ENST00000483882 RXRBP28702 533 aa21.81■■□□□ 1.08
NR1H3-222ENST00000483882 ORAI2Q96SN7 254 aa21.81■■□□□ 1.08
NR1H3-222ENST00000483882 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
NR1H3-222ENST00000483882 C8orf37Q96NL8 207 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms