RNA–Protein interactions for RNA: ENST00000483773.1

FBXO28-203, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-203ENST00000483773 MYOM2P54296 1465 aa18.42■□□□□ 0.54
FBXO28-203ENST00000483773 CEP170BQ9Y4F5 1589 aaPredicted RBP18.4■□□□□ 0.54
FBXO28-203ENST00000483773 KDM2AQ9Y2K7 1162 aa18.4■□□□□ 0.54
FBXO28-203ENST00000483773 EID1Q9Y6B2 187 aa18.4■□□□□ 0.54
FBXO28-203ENST00000483773 TMEM2Q9UHN6 1383 aa18.4■□□□□ 0.54
FBXO28-203ENST00000483773 UBR1Q8IWV7 1749 aa18.4■□□□□ 0.54
FBXO28-203ENST00000483773 ZNF142P52746 1687 aaPredicted RBP18.39■□□□□ 0.53
FBXO28-203ENST00000483773 PRAG1Q86YV5 1406 aa18.37■□□□□ 0.53
FBXO28-203ENST00000483773 RIMS2Q9UQ26 1411 aa18.37■□□□□ 0.53
FBXO28-203ENST00000483773 SLIT1O75093 1534 aa18.37■□□□□ 0.53
FBXO28-203ENST00000483773 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
FBXO28-203ENST00000483773 PPLO60437 1756 aa18.37■□□□□ 0.53
FBXO28-203ENST00000483773 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
FBXO28-203ENST00000483773 ARHGAP23Q9P227 1491 aa18.35■□□□□ 0.53
FBXO28-203ENST00000483773 NRXN1Q9ULB1 1477 aa18.35■□□□□ 0.53
FBXO28-203ENST00000483773 MYO5BQ9ULV0 1848 aa18.35■□□□□ 0.53
FBXO28-203ENST00000483773 ANKLE2Q86XL3 938 aa18.34■□□□□ 0.53
FBXO28-203ENST00000483773 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
FBXO28-203ENST00000483773 ADGRF5Q8IZF2 1346 aa18.31■□□□□ 0.52
FBXO28-203ENST00000483773 NBPF8Q3BBV2 869 aa18.31■□□□□ 0.52
FBXO28-203ENST00000483773 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
FBXO28-203ENST00000483773 KIAA1210Q9ULL0 1709 aa18.31■□□□□ 0.52
FBXO28-203ENST00000483773 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
FBXO28-203ENST00000483773 RALGAPBQ86X10 1494 aa18.29■□□□□ 0.52
FBXO28-203ENST00000483773 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
FBXO28-203ENST00000483773 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
FBXO28-203ENST00000483773 LAMC1P11047 1609 aa18.27■□□□□ 0.52
FBXO28-203ENST00000483773 GPRASP1Q5JY77 1395 aa18.27■□□□□ 0.51
FBXO28-203ENST00000483773 LTKP29376 864 aa18.26■□□□□ 0.51
FBXO28-203ENST00000483773 ROCK2O75116 1388 aaKnown RBP18.26■□□□□ 0.51
FBXO28-203ENST00000483773 TRPM1Q7Z4N2 1603 aa18.25■□□□□ 0.51
FBXO28-203ENST00000483773 SETBP1Q9Y6X0 1596 aa18.25■□□□□ 0.51
FBXO28-203ENST00000483773 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
FBXO28-203ENST00000483773 CARD11Q9BXL7 1154 aa18.24■□□□□ 0.51
FBXO28-203ENST00000483773 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
FBXO28-203ENST00000483773 BCANQ96GW7 911 aa18.23■□□□□ 0.51
FBXO28-203ENST00000483773 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
FBXO28-203ENST00000483773 MED14O60244 1454 aa18.22■□□□□ 0.51
FBXO28-203ENST00000483773 LMTK3Q96Q04 1460 aa18.22■□□□□ 0.51
FBXO28-203ENST00000483773 SLC24A1O60721 1099 aa18.22■□□□□ 0.51
FBXO28-203ENST00000483773 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
FBXO28-203ENST00000483773 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
FBXO28-203ENST00000483773 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
FBXO28-203ENST00000483773 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
FBXO28-203ENST00000483773 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
FBXO28-203ENST00000483773 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
FBXO28-203ENST00000483773 NPHP4O75161 1426 aaPredicted RBP18.17■□□□□ 0.5
FBXO28-203ENST00000483773 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
FBXO28-203ENST00000483773 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
FBXO28-203ENST00000483773 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
FBXO28-203ENST00000483773 ADAMTS13Q76LX8 1427 aa18.15■□□□□ 0.5
FBXO28-203ENST00000483773 ADGRB1O14514 1584 aa18.14■□□□□ 0.49
FBXO28-203ENST00000483773 NRXN3Q9Y4C0 1643 aa18.14■□□□□ 0.49
FBXO28-203ENST00000483773 LRPPRCP42704 1394 aaKnown RBP18.14■□□□□ 0.49
FBXO28-203ENST00000483773 ABCC11Q96J66 1382 aa18.14■□□□□ 0.49
FBXO28-203ENST00000483773 USP47Q96K76 1375 aa18.14■□□□□ 0.49
FBXO28-203ENST00000483773 NCKAP5LQ9HCH0 1330 aa18.13■□□□□ 0.49
FBXO28-203ENST00000483773 HSPA2P54652 639 aa18.12■□□□□ 0.49
FBXO28-203ENST00000483773 YTHDC2Q9H6S0 1430 aaKnown RBP18.12■□□□□ 0.49
FBXO28-203ENST00000483773 IQGAP1P46940 1657 aa18.12■□□□□ 0.49
FBXO28-203ENST00000483773 TMEM132EQ6IEE7 984 aa18.11■□□□□ 0.49
FBXO28-203ENST00000483773 SLC26A8Q96RN1 970 aa18.11■□□□□ 0.49
FBXO28-203ENST00000483773 SETD1AO15047 1707 aaKnown RBP18.1■□□□□ 0.49
FBXO28-203ENST00000483773 HSPA5P11021 654 aaKnown RBP18.1■□□□□ 0.49
FBXO28-203ENST00000483773 METP08581 1390 aa18.09■□□□□ 0.49
FBXO28-203ENST00000483773 DLC1Q96QB1 1528 aa18.08■□□□□ 0.49
FBXO28-203ENST00000483773 TECPR2O15040 1411 aa18.08■□□□□ 0.49
FBXO28-203ENST00000483773 FAM135BQ49AJ0 1406 aa18.07■□□□□ 0.48
FBXO28-203ENST00000483773 ZNF316A6NFI3 1004 aaPredicted RBP18.07■□□□□ 0.48
FBXO28-203ENST00000483773 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
FBXO28-203ENST00000483773 SBNO2Q9Y2G9 1366 aa18.06■□□□□ 0.48
FBXO28-203ENST00000483773 CENPJQ9HC77 1338 aaPredicted RBP18.06■□□□□ 0.48
FBXO28-203ENST00000483773 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
FBXO28-203ENST00000483773 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
FBXO28-203ENST00000483773 KCNA6P17658 529 aa18.05■□□□□ 0.48
FBXO28-203ENST00000483773 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
FBXO28-203ENST00000483773 STK26Q9P289 416 aa18.05■□□□□ 0.48
FBXO28-203ENST00000483773 AMOTL2Q9Y2J4 779 aa18.05■□□□□ 0.48
FBXO28-203ENST00000483773 POGKQ9P215 609 aa18.04■□□□□ 0.48
FBXO28-203ENST00000483773 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
FBXO28-203ENST00000483773 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
FBXO28-203ENST00000483773 SENP3Q9H4L4 574 aaPredicted RBP18.03■□□□□ 0.48
FBXO28-203ENST00000483773 TMF1P82094 1093 aa18.02■□□□□ 0.48
FBXO28-203ENST00000483773 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
FBXO28-203ENST00000483773 CHD2O14647 1828 aaKnown RBP18.01■□□□□ 0.47
FBXO28-203ENST00000483773 PUS7Q96PZ0 661 aaKnown RBP18.01■□□□□ 0.47
FBXO28-203ENST00000483773 CPS1P31327 1500 aa18.01■□□□□ 0.47
FBXO28-203ENST00000483773 PRAM1Q96QH2 718 aa18■□□□□ 0.47
FBXO28-203ENST00000483773 TESK2Q96S53 571 aa18■□□□□ 0.47
FBXO28-203ENST00000483773 PTPRUQ92729 1446 aa17.99■□□□□ 0.47
FBXO28-203ENST00000483773 ARHGEF28Q8N1W1 1705 aaKnown RBP17.99■□□□□ 0.47
FBXO28-203ENST00000483773 XRN1Q8IZH2 1706 aaKnown RBP17.98■□□□□ 0.47
FBXO28-203ENST00000483773 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
FBXO28-203ENST00000483773 NCOA3Q9Y6Q9 1424 aa17.97■□□□□ 0.47
FBXO28-203ENST00000483773 EVC2Q86UK5 1308 aa17.97■□□□□ 0.47
FBXO28-203ENST00000483773 NWD1Q149M9 1564 aa17.96■□□□□ 0.47
FBXO28-203ENST00000483773 ROBO2Q9HCK4 1378 aa17.95■□□□□ 0.46
FBXO28-203ENST00000483773 HIRIP3Q9BW71 556 aaPredicted RBP17.94■□□□□ 0.46
FBXO28-203ENST00000483773 WAPLQ7Z5K2 1190 aa17.93■□□□□ 0.46
FBXO28-203ENST00000483773 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms