RNA–Protein interactions for RNA: ENST00000483770.1

PABPC4-214, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-214ENST00000483770 NUP155O75694 1391 aa13.87□□□□□ -0.19
PABPC4-214ENST00000483770 TMEM131LA2VDJ0 1609 aa13.86□□□□□ -0.19
PABPC4-214ENST00000483770 ROCK1Q13464 1354 aa13.86□□□□□ -0.19
PABPC4-214ENST00000483770 PROSER2Q86WR7 435 aaPredicted RBP13.86□□□□□ -0.19
PABPC4-214ENST00000483770 RPRD2Q5VT52 1461 aaKnown RBP13.86□□□□□ -0.19
PABPC4-214ENST00000483770 IQGAP3Q86VI3 1631 aa13.86□□□□□ -0.19
PABPC4-214ENST00000483770 RIMS2Q9UQ26 1411 aa13.85□□□□□ -0.19
PABPC4-214ENST00000483770 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
PABPC4-214ENST00000483770 KCNA6P17658 529 aa13.85□□□□□ -0.19
PABPC4-214ENST00000483770 TMEM94Q12767 1356 aa13.84□□□□□ -0.19
PABPC4-214ENST00000483770 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.19
PABPC4-214ENST00000483770 ZFYVE9O95405 1425 aa13.83□□□□□ -0.2
PABPC4-214ENST00000483770 SOCS7O14512 581 aa13.83□□□□□ -0.2
PABPC4-214ENST00000483770 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
PABPC4-214ENST00000483770 PLEKHG1Q9ULL1 1385 aa13.8□□□□□ -0.2
PABPC4-214ENST00000483770 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
PABPC4-214ENST00000483770 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
PABPC4-214ENST00000483770 NWD1Q149M9 1564 aa13.77□□□□□ -0.21
PABPC4-214ENST00000483770 TRIM52Q96A61 297 aa13.77□□□□□ -0.21
PABPC4-214ENST00000483770 RRBP1Q9P2E9 1410 aaKnown RBP13.77□□□□□ -0.21
PABPC4-214ENST00000483770 ROBO1Q9Y6N7 1651 aa13.77□□□□□ -0.21
PABPC4-214ENST00000483770 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
PABPC4-214ENST00000483770 ZNF326Q5BKZ1 582 aaKnown RBP13.76□□□□□ -0.21
PABPC4-214ENST00000483770 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.76□□□□□ -0.21
PABPC4-214ENST00000483770 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
PABPC4-214ENST00000483770 TBX22Q9Y458 520 aa13.76□□□□□ -0.21
PABPC4-214ENST00000483770 NAIPQ13075 1403 aa13.75□□□□□ -0.21
PABPC4-214ENST00000483770 C14orf37Q86TY3 774 aa13.74□□□□□ -0.21
PABPC4-214ENST00000483770 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
PABPC4-214ENST00000483770 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
PABPC4-214ENST00000483770 MSH6P52701 1360 aa13.73□□□□□ -0.21
PABPC4-214ENST00000483770 SLAIN2Q9P270 581 aa13.73□□□□□ -0.21
PABPC4-214ENST00000483770 FAM135BQ49AJ0 1406 aa13.73□□□□□ -0.21
PABPC4-214ENST00000483770 PTPRUQ92729 1446 aa13.73□□□□□ -0.21
PABPC4-214ENST00000483770 FOXD1Q16676 465 aa13.72□□□□□ -0.21
PABPC4-214ENST00000483770 AMOTL2Q9Y2J4 779 aa13.72□□□□□ -0.21
PABPC4-214ENST00000483770 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.21
PABPC4-214ENST00000483770 NRXN3Q9Y4C0 1643 aa13.71□□□□□ -0.22
PABPC4-214ENST00000483770 KIF1BO60333 1816 aa13.71□□□□□ -0.22
PABPC4-214ENST00000483770 PHLPP1O60346 1717 aa13.7□□□□□ -0.22
PABPC4-214ENST00000483770 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
PABPC4-214ENST00000483770 TRPM2O94759 1503 aa13.68□□□□□ -0.22
PABPC4-214ENST00000483770 METP08581 1390 aa13.68□□□□□ -0.22
PABPC4-214ENST00000483770 DIP2AQ14689 1571 aa13.67□□□□□ -0.22
PABPC4-214ENST00000483770 SLC4A1APQ9BWU0 796 aaKnown RBP13.67□□□□□ -0.22
PABPC4-214ENST00000483770 NEXMIFQ5QGS0 1516 aa13.66□□□□□ -0.22
PABPC4-214ENST00000483770 HFM1A2PYH4 1435 aa13.65□□□□□ -0.22
PABPC4-214ENST00000483770 ATF3P18847 181 aa13.65□□□□□ -0.22
PABPC4-214ENST00000483770 C19orf44Q9H6X5 657 aa13.65□□□□□ -0.22
PABPC4-214ENST00000483770 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
PABPC4-214ENST00000483770 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
PABPC4-214ENST00000483770 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
PABPC4-214ENST00000483770 XRN1Q8IZH2 1706 aaKnown RBP13.63□□□□□ -0.23
PABPC4-214ENST00000483770 CADPS2Q86UW7 1296 aa13.62□□□□□ -0.23
PABPC4-214ENST00000483770 DDX17Q92841 729 aaKnown RBP13.62□□□□□ -0.23
PABPC4-214ENST00000483770 COL16A1Q07092 1604 aaPredicted RBP13.61□□□□□ -0.23
PABPC4-214ENST00000483770 RGL3Q3MIN7 710 aa13.61□□□□□ -0.23
PABPC4-214ENST00000483770 NCOA3Q9Y6Q9 1424 aa13.61□□□□□ -0.23
PABPC4-214ENST00000483770 BRINP3Q76B58 766 aa13.6□□□□□ -0.23
PABPC4-214ENST00000483770 PPLO60437 1756 aa13.6□□□□□ -0.23
PABPC4-214ENST00000483770 SETD1AO15047 1707 aaKnown RBP13.59□□□□□ -0.23
PABPC4-214ENST00000483770 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
PABPC4-214ENST00000483770 JCADQ9P266 1359 aa13.58□□□□□ -0.23
PABPC4-214ENST00000483770 MPHOSPH9Q99550 1183 aa13.58□□□□□ -0.24
PABPC4-214ENST00000483770 NUTM2BA6NNL0 878 aaPredicted RBP13.57□□□□□ -0.24
PABPC4-214ENST00000483770 NUTM2EB1AL46 878 aaPredicted RBP13.57□□□□□ -0.24
PABPC4-214ENST00000483770 VGFO15240 615 aaPredicted RBP13.57□□□□□ -0.24
PABPC4-214ENST00000483770 NUTM2AQ8IVF1 878 aaPredicted RBP13.57□□□□□ -0.24
PABPC4-214ENST00000483770 ADGRF5Q8IZF2 1346 aa13.57□□□□□ -0.24
PABPC4-214ENST00000483770 LRP6O75581 1613 aa13.57□□□□□ -0.24
PABPC4-214ENST00000483770 MST1RQ04912 1400 aa13.56□□□□□ -0.24
PABPC4-214ENST00000483770 AHDC1Q5TGY3 1603 aaPredicted RBP13.55□□□□□ -0.24
PABPC4-214ENST00000483770 MEX3CQ5U5Q3 659 aaKnown RBP13.55□□□□□ -0.24
PABPC4-214ENST00000483770 ROBO2Q9HCK4 1378 aa13.55□□□□□ -0.24
PABPC4-214ENST00000483770 STK26Q9P289 416 aa13.54□□□□□ -0.24
PABPC4-214ENST00000483770 ASXL1Q8IXJ9 1541 aa13.54□□□□□ -0.24
PABPC4-214ENST00000483770 ORAI2Q96SN7 254 aa13.53□□□□□ -0.24
PABPC4-214ENST00000483770 RPGRIP1LQ68CZ1 1315 aa13.53□□□□□ -0.24
PABPC4-214ENST00000483770 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
PABPC4-214ENST00000483770 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
PABPC4-214ENST00000483770 TMEM132EQ6IEE7 984 aa13.52□□□□□ -0.25
PABPC4-214ENST00000483770 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
PABPC4-214ENST00000483770 NHSL1Q5SYE7 1610 aa13.51□□□□□ -0.25
PABPC4-214ENST00000483770 DCCP43146 1447 aa13.51□□□□□ -0.25
PABPC4-214ENST00000483770 NUTM2FA1L443 756 aa13.51□□□□□ -0.25
PABPC4-214ENST00000483770 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
PABPC4-214ENST00000483770 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
PABPC4-214ENST00000483770 SETD5Q9C0A6 1442 aa13.5□□□□□ -0.25
PABPC4-214ENST00000483770 SPATA31A6Q5VVP1 1343 aa13.5□□□□□ -0.25
PABPC4-214ENST00000483770 C1orf167Q5SNV9 1468 aa13.49□□□□□ -0.25
PABPC4-214ENST00000483770 SPATA31E1Q6ZUB1 1445 aa13.49□□□□□ -0.25
PABPC4-214ENST00000483770 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
PABPC4-214ENST00000483770 LRRC59Q96AG4 307 aaKnown RBP13.47□□□□□ -0.25
PABPC4-214ENST00000483770 RAB3GAP2Q9H2M9 1393 aa13.46□□□□□ -0.25
PABPC4-214ENST00000483770 PLEKHH1Q9ULM0 1364 aa13.46□□□□□ -0.25
PABPC4-214ENST00000483770 XPCQ01831 940 aaPredicted RBP13.46□□□□□ -0.25
PABPC4-214ENST00000483770 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
PABPC4-214ENST00000483770 CFAP70Q5T0N1 1121 aa13.45□□□□□ -0.26
PABPC4-214ENST00000483770 C8orf37Q96NL8 207 aa13.45□□□□□ -0.26
PABPC4-214ENST00000483770 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms