RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 ZNF335Q9H4Z2 1342 aaPredicted RBP13.34□□□□□ -0.27
POLR1A-207ENST00000483538 NWD1Q149M9 1564 aa13.33□□□□□ -0.28
POLR1A-207ENST00000483538 MPHOSPH9Q99550 1183 aa13.33□□□□□ -0.28
POLR1A-207ENST00000483538 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
POLR1A-207ENST00000483538 CHD2O14647 1828 aaKnown RBP13.32□□□□□ -0.28
POLR1A-207ENST00000483538 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
POLR1A-207ENST00000483538 DIP2AQ14689 1571 aa13.3□□□□□ -0.28
POLR1A-207ENST00000483538 TXNDC2Q86VQ3 553 aa13.3□□□□□ -0.28
POLR1A-207ENST00000483538 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
POLR1A-207ENST00000483538 CPS1P31327 1500 aa13.29□□□□□ -0.28
POLR1A-207ENST00000483538 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
POLR1A-207ENST00000483538 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
POLR1A-207ENST00000483538 IQSEC2Q5JU85 1478 aa13.29□□□□□ -0.28
POLR1A-207ENST00000483538 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
POLR1A-207ENST00000483538 CCDC144AA2RUR9 1427 aa13.28□□□□□ -0.28
POLR1A-207ENST00000483538 XRN1Q8IZH2 1706 aaKnown RBP13.27□□□□□ -0.28
POLR1A-207ENST00000483538 HRCP23327 699 aa13.27□□□□□ -0.29
POLR1A-207ENST00000483538 CERKQ8TCT0 537 aa13.26□□□□□ -0.29
POLR1A-207ENST00000483538 LRRC7Q96NW7 1537 aa13.26□□□□□ -0.29
POLR1A-207ENST00000483538 EID1Q9Y6B2 187 aa13.26□□□□□ -0.29
POLR1A-207ENST00000483538 ANKRD30BQ9BXX2 1392 aa13.25□□□□□ -0.29
POLR1A-207ENST00000483538 ACIN1Q9UKV3 1341 aaKnown RBP13.25□□□□□ -0.29
POLR1A-207ENST00000483538 CHGAP10645 457 aaKnown RBP13.25□□□□□ -0.29
POLR1A-207ENST00000483538 NUTM2DQ5VT03 806 aaPredicted RBP13.24□□□□□ -0.29
POLR1A-207ENST00000483538 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
POLR1A-207ENST00000483538 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
POLR1A-207ENST00000483538 SLC26A8Q96RN1 970 aa13.22□□□□□ -0.29
POLR1A-207ENST00000483538 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
POLR1A-207ENST00000483538 PTPRUQ92729 1446 aa13.21□□□□□ -0.3
POLR1A-207ENST00000483538 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.2□□□□□ -0.3
POLR1A-207ENST00000483538 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
POLR1A-207ENST00000483538 MYOM2P54296 1465 aa13.19□□□□□ -0.3
POLR1A-207ENST00000483538 PPP1R15AO75807 674 aaPredicted RBP13.19□□□□□ -0.3
POLR1A-207ENST00000483538 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
POLR1A-207ENST00000483538 LAMC1P11047 1609 aa13.18□□□□□ -0.3
POLR1A-207ENST00000483538 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
POLR1A-207ENST00000483538 ILDR1Q86SU0 546 aaPredicted RBP13.18□□□□□ -0.3
POLR1A-207ENST00000483538 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
POLR1A-207ENST00000483538 NALCNQ8IZF0 1738 aa13.18□□□□□ -0.3
POLR1A-207ENST00000483538 KNDC1Q76NI1 1749 aa13.17□□□□□ -0.3
POLR1A-207ENST00000483538 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
POLR1A-207ENST00000483538 METP08581 1390 aa13.17□□□□□ -0.3
POLR1A-207ENST00000483538 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
POLR1A-207ENST00000483538 TBX22Q9Y458 520 aa13.16□□□□□ -0.3
POLR1A-207ENST00000483538 DHX57Q6P158 1386 aaKnown RBP13.16□□□□□ -0.3
POLR1A-207ENST00000483538 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
POLR1A-207ENST00000483538 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
POLR1A-207ENST00000483538 ADGRF5Q8IZF2 1346 aa13.14□□□□□ -0.31
POLR1A-207ENST00000483538 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.14□□□□□ -0.31
POLR1A-207ENST00000483538 KCNA6P17658 529 aa13.14□□□□□ -0.31
POLR1A-207ENST00000483538 HDGFP51858 240 aaKnown RBP13.14□□□□□ -0.31
POLR1A-207ENST00000483538 TMEM94Q12767 1356 aa13.13□□□□□ -0.31
POLR1A-207ENST00000483538 RGL3Q3MIN7 710 aa13.12□□□□□ -0.31
POLR1A-207ENST00000483538 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
POLR1A-207ENST00000483538 BCANQ96GW7 911 aa13.11□□□□□ -0.31
POLR1A-207ENST00000483538 VGFO15240 615 aaPredicted RBP13.1□□□□□ -0.31
POLR1A-207ENST00000483538 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
POLR1A-207ENST00000483538 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
POLR1A-207ENST00000483538 KIAA1210Q9ULL0 1709 aa13.1□□□□□ -0.31
POLR1A-207ENST00000483538 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.31
POLR1A-207ENST00000483538 TECPR2O15040 1411 aa13.08□□□□□ -0.32
POLR1A-207ENST00000483538 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
POLR1A-207ENST00000483538 AMOTL2Q9Y2J4 779 aa13.07□□□□□ -0.32
POLR1A-207ENST00000483538 ARHGEF28Q8N1W1 1705 aaKnown RBP13.07□□□□□ -0.32
POLR1A-207ENST00000483538 NCOA3Q9Y6Q9 1424 aa13.06□□□□□ -0.32
POLR1A-207ENST00000483538 UBAP1LF5GYI3 381 aa13.06□□□□□ -0.32
POLR1A-207ENST00000483538 TRPM1Q7Z4N2 1603 aa13.06□□□□□ -0.32
POLR1A-207ENST00000483538 PROSER2Q86WR7 435 aaPredicted RBP13.05□□□□□ -0.32
POLR1A-207ENST00000483538 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
POLR1A-207ENST00000483538 CDC42BPGQ6DT37 1551 aa13.04□□□□□ -0.32
POLR1A-207ENST00000483538 YTHDC2Q9H6S0 1430 aaKnown RBP13.04□□□□□ -0.32
POLR1A-207ENST00000483538 SIN3AQ96ST3 1273 aa13.03□□□□□ -0.32
POLR1A-207ENST00000483538 LRPPRCP42704 1394 aaKnown RBP13.03□□□□□ -0.32
POLR1A-207ENST00000483538 DCCP43146 1447 aa13.03□□□□□ -0.32
POLR1A-207ENST00000483538 DLC1Q96QB1 1528 aa13.03□□□□□ -0.32
POLR1A-207ENST00000483538 FMN2Q9NZ56 1722 aa13.02□□□□□ -0.32
POLR1A-207ENST00000483538 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
POLR1A-207ENST00000483538 MSH6P52701 1360 aa13.02□□□□□ -0.33
POLR1A-207ENST00000483538 CFAP70Q5T0N1 1121 aa13.01□□□□□ -0.33
POLR1A-207ENST00000483538 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
POLR1A-207ENST00000483538 DCAF11Q8TEB1 546 aa13.01□□□□□ -0.33
POLR1A-207ENST00000483538 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
POLR1A-207ENST00000483538 NHSL1Q5SYE7 1610 aa13.01□□□□□ -0.33
POLR1A-207ENST00000483538 MST1RQ04912 1400 aa13□□□□□ -0.33
POLR1A-207ENST00000483538 ABCC11Q96J66 1382 aa13□□□□□ -0.33
POLR1A-207ENST00000483538 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
POLR1A-207ENST00000483538 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
POLR1A-207ENST00000483538 TOM1O60784 492 aa12.99□□□□□ -0.33
POLR1A-207ENST00000483538 PCGF6Q9BYE7 350 aa12.99□□□□□ -0.33
POLR1A-207ENST00000483538 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
POLR1A-207ENST00000483538 PHLPP1O60346 1717 aa12.99□□□□□ -0.33
POLR1A-207ENST00000483538 USP32Q8NFA0 1604 aa12.99□□□□□ -0.33
POLR1A-207ENST00000483538 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
POLR1A-207ENST00000483538 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
POLR1A-207ENST00000483538 KDM2AQ9Y2K7 1162 aa12.98□□□□□ -0.33
POLR1A-207ENST00000483538 AHDC1Q5TGY3 1603 aaPredicted RBP12.98□□□□□ -0.33
POLR1A-207ENST00000483538 L3MBTL2Q969R5 705 aa12.97□□□□□ -0.33
POLR1A-207ENST00000483538 C19orf44Q9H6X5 657 aa12.96□□□□□ -0.33
POLR1A-207ENST00000483538 STK26Q9P289 416 aa12.95□□□□□ -0.34
POLR1A-207ENST00000483538 QRICH2Q9H0J4 1663 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms